RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 ZHX2Q9Y6X8 837 aa11.14□□□□□ -0.63
PTPN20-202ENST00000374339 KIF28PB7ZC32 967 aa11.13□□□□□ -0.63
PTPN20-202ENST00000374339 FIBPO43427 364 aa11.13□□□□□ -0.63
PTPN20-202ENST00000374339 PRPF40AO75400 957 aaKnown RBP11.13□□□□□ -0.63
PTPN20-202ENST00000374339 SPP2Q13103 211 aa11.13□□□□□ -0.63
PTPN20-202ENST00000374339 CDC37Q16543 378 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-202ENST00000374339 FAM173BQ6P4H8 233 aa11.13□□□□□ -0.63
PTPN20-202ENST00000374339 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-202ENST00000374339 BLIDQ8IZY5 108 aa11.13□□□□□ -0.63
PTPN20-202ENST00000374339 C12orf42Q96LP6 360 aa11.13□□□□□ -0.63
PTPN20-202ENST00000374339 AMNQ9BXJ7 453 aa11.13□□□□□ -0.63
PTPN20-202ENST00000374339 LMBRD1Q9NUN5 540 aa11.13□□□□□ -0.63
PTPN20-202ENST00000374339 POLR3EQ9NVU0 708 aa11.13□□□□□ -0.63
PTPN20-202ENST00000374339 RTEL1Q9NZ71 1219 aa11.13□□□□□ -0.63
PTPN20-202ENST00000374339 NOL7Q9UMY1 257 aaKnown RBP11.13□□□□□ -0.63
PTPN20-202ENST00000374339 SNCAIPQ9Y6H5 919 aa11.13□□□□□ -0.63
PTPN20-202ENST00000374339 GOLGA6L4A6NEF3 574 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 SMCO2A6NFE2 343 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 TRIM75PA6NK02 468 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 YEATS4O95619 227 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 MBD3O95983 291 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 FDX1P10109 184 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 ADCY7P51828 1080 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 FKBP1BP68106 108 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 PPATQ06203 517 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 NPY5RQ15761 445 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 QRICH1Q2TAL8 776 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 KIAA1755Q5JYT7 1200 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 MAP1SQ66K74 1059 aaPredicted RBP11.12□□□□□ -0.63
PTPN20-202ENST00000374339 MCTP2Q6DN12 878 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 CCDC84Q86UT8 332 aaPredicted RBP11.12□□□□□ -0.63
PTPN20-202ENST00000374339 FBXO11Q86XK2 927 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 ERO1BQ86YB8 467 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 PRPF38AQ8NAV1 312 aaKnown RBP11.12□□□□□ -0.63
PTPN20-202ENST00000374339 KCNG4Q8TDN1 519 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 LEO1Q8WVC0 666 aaPredicted RBP11.12□□□□□ -0.63
PTPN20-202ENST00000374339 ANP32EQ9BTT0 268 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 TANGO6Q9C0B7 1094 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 TMOD4Q9NZQ9 345 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 TFIP11Q9UBB9 837 aaKnown RBP11.12□□□□□ -0.63
PTPN20-202ENST00000374339 PNMA2Q9UL42 364 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 PRR12Q9ULL5 1215 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 FZD1Q9UP38 647 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 CEP131Q9UPN4 1083 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 AFG3L2Q9Y4W6 797 aa11.12□□□□□ -0.63
PTPN20-202ENST00000374339 CCDC194A0A1B0GVG4 234 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 BMP15O95972 392 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 VCAM1P19320 739 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 TRAPPC10P48553 1259 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 NASPP49321 788 aaPredicted RBP11.11□□□□□ -0.63
PTPN20-202ENST00000374339 MRPL12P52815 198 aaKnown RBP11.11□□□□□ -0.63
PTPN20-202ENST00000374339 UBE2HP62256 183 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 NR5A1Q13285 461 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 SH3D19Q5HYK7 790 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 ANO1Q5XXA6 986 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 KRT25Q7Z3Z0 450 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 REXO1Q8N1G1 1221 aaKnown RBP11.11□□□□□ -0.63
PTPN20-202ENST00000374339 JMYQ8N9B5 988 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 OXER1Q8TDS5 423 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 CUL5Q93034 780 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 TNFRSF25Q93038 417 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 SHISA4Q96DD7 197 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 CHAMP1Q96JM3 812 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 SLF1Q9BQI6 1058 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 GDPD2Q9HCC8 539 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 RIC8AQ9NPQ8 531 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 EMILIN3Q9NT22 766 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 RCOR1Q9UKL0 485 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 PCDHA1Q9Y5I3 950 aa11.11□□□□□ -0.63
PTPN20-202ENST00000374339 DDX49Q9Y6V7 483 aaKnown RBP11.11□□□□□ -0.63
PTPN20-202ENST00000374339 PTPRFP10586 1907 aa11.1□□□□□ -0.63
PTPN20-202ENST00000374339 LOC285556D6RIA3 1793 aa11.1□□□□□ -0.63
PTPN20-202ENST00000374339 TRAK2O60296 914 aa11.1□□□□□ -0.63
PTPN20-202ENST00000374339 POTEJP0CG39 1038 aa11.1□□□□□ -0.63
PTPN20-202ENST00000374339 HMGCS2P54868 508 aa11.1□□□□□ -0.63
PTPN20-202ENST00000374339 STK38Q15208 465 aa11.1□□□□□ -0.63
PTPN20-202ENST00000374339 KLHL40Q2TBA0 621 aa11.1□□□□□ -0.63
PTPN20-202ENST00000374339 TYW1BQ6NUM6 668 aa11.1□□□□□ -0.63
PTPN20-202ENST00000374339 DLK2Q6UY11 383 aa11.1□□□□□ -0.63
PTPN20-202ENST00000374339 KIFC2Q96AC6 838 aa11.1□□□□□ -0.63
PTPN20-202ENST00000374339 COA7Q96BR5 231 aa11.1□□□□□ -0.63
PTPN20-202ENST00000374339 USP28Q96RU2 1077 aa11.1□□□□□ -0.63
PTPN20-202ENST00000374339 RANBP17Q9H2T7 1088 aaKnown RBP11.1□□□□□ -0.63
PTPN20-202ENST00000374339 RPAP3Q9H6T3 665 aaPredicted RBP11.1□□□□□ -0.63
PTPN20-202ENST00000374339 PARP14Q460N5 1801 aa11.1□□□□□ -0.63
PTPN20-202ENST00000374339 MYPNQ86TC9 1320 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 SPDYE5A6NIY4 337 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 M0R2N6 131 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 PPP1R11O60927 126 aaPredicted RBP11.09□□□□□ -0.63
PTPN20-202ENST00000374339 FLOT1O75955 427 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 CEBPZQ03701 1054 aaKnown RBP11.09□□□□□ -0.63
PTPN20-202ENST00000374339 PPIL2Q13356 520 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 SLC39A14Q15043 492 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 SF3A1Q15459 793 aaKnown RBP11.09□□□□□ -0.63
PTPN20-202ENST00000374339 LDLRAD1Q5T700 205 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 PIK3AP1Q6ZUJ8 805 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 LINC00301Q8NCQ3 95 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 PROCA1Q8NCQ7 364 aaPredicted RBP11.09□□□□□ -0.63
PTPN20-202ENST00000374339 PSTPIP2Q9H939 334 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 ELP3Q9H9T3 547 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms