RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 FBXO11Q86XK2 927 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 CYP2J2P51589 502 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 SLF1Q9BQI6 1058 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 PLCB1Q9NQ66 1216 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 GCC2Q8IWJ2 1684 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 MED10Q9BTT4 135 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 FAM135BQ49AJ0 1406 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 TNKSO95271 1327 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 KLRF2D3W0D1 207 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 EEPD1Q7L9B9 569 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 ZMYM4Q5VZL5 1548 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 CHD1O14646 1710 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 SLC16A2P36021 539 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 IL1RL1Q01638 556 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 XKR9Q5GH70 373 aa15.75■□□□□ 0.11
TRAF1-201ENST00000373887 SPECC1L-ADORA2AF8WAN1 911 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 IL6STP40189 918 aaPredicted RBP15.74■□□□□ 0.11
TRAF1-201ENST00000373887 LONRF2Q1L5Z9 754 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 NOP9Q86U38 636 aaKnown RBP15.74■□□□□ 0.11
TRAF1-201ENST00000373887 ARHGAP25P42331 645 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 PAK2Q13177 524 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 TYW1BQ6NUM6 668 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 PEX26Q7Z412 305 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 PPP1R16BQ96T49 567 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 EFCC1Q9HA90 598 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 STX2P32856 288 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 MTX1Q13505 466 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 KRT71Q3SY84 523 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 DSCC1Q9BVC3 393 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 TPX2Q9ULW0 747 aaKnown RBP15.74■□□□□ 0.11
TRAF1-201ENST00000373887 MX2P20592 715 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 COG7P83436 770 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 PABPC4Q13310 644 aaKnown RBP eCLIP15.74■□□□□ 0.11
TRAF1-201ENST00000373887 PI16Q6UXB8 463 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 OTUD6AQ7L8S5 288 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 TAB3Q8N5C8 712 aaPredicted RBP15.74■□□□□ 0.11
TRAF1-201ENST00000373887 SEPT10Q9P0V9 454 aa15.74■□□□□ 0.11
TRAF1-201ENST00000373887 PDE8BO95263 885 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 KLHL30Q0D2K2 578 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 PALM2Q8IXS6 379 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 TRMT44Q8IYL2 757 aaKnown RBP15.73■□□□□ 0.11
TRAF1-201ENST00000373887 PGBD1Q96JS3 809 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 PCDHB13Q9Y5F0 798 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 PSDA5PKW4 1024 aaPredicted RBP15.73■□□□□ 0.11
TRAF1-201ENST00000373887 RPS6KA1Q15418 735 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 RIOK1Q9BRS2 568 aaKnown RBP15.73■□□□□ 0.11
TRAF1-201ENST00000373887 HSPD1P10809 573 aaKnown RBP15.73■□□□□ 0.11
TRAF1-201ENST00000373887 SAT1P21673 171 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 MAGEA1P43355 309 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 SNAP25P60880 206 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 C4orf50Q6ZRC1 276 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 NELFBQ8WX92 580 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 SCYL1Q96KG9 808 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 MRPL46Q9H2W6 279 aaKnown RBP15.73■□□□□ 0.11
TRAF1-201ENST00000373887 XAB2Q9HCS7 855 aaKnown RBP15.73■□□□□ 0.11
TRAF1-201ENST00000373887 INPP1P49441 399 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 GPBP1Q86WP2 473 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 SMAP1Q8IYB5 467 aaPredicted RBP15.73■□□□□ 0.11
TRAF1-201ENST00000373887 HVCN1Q96D96 273 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 INTS4Q96HW7 963 aaKnown RBP15.73■□□□□ 0.11
TRAF1-201ENST00000373887 KRT12Q99456 494 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 MRPL11Q9Y3B7 192 aaKnown RBP15.73■□□□□ 0.11
TRAF1-201ENST00000373887 TTC37Q6PGP7 1564 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 MYOM2P54296 1465 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 AOX1Q06278 1338 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 CCDC13Q8IYE1 715 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 RSAD2Q8WXG1 361 aa15.73■□□□□ 0.11
TRAF1-201ENST00000373887 MMS19Q96T76 1030 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 CBX8Q9HC52 389 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 PALLDQ8WX93 1383 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 ADD1P35611 737 aaKnown RBP15.72■□□□□ 0.11
TRAF1-201ENST00000373887 PPP1R2P41236 205 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 YARSP54577 528 aaKnown RBP15.72■□□□□ 0.11
TRAF1-201ENST00000373887 PNOCQ13519 176 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 PDZD8Q8NEN9 1154 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 MORC4Q8TE76 937 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 VCX3AQ9NNX9 186 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 M0R2C6 588 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 FGAP02671 866 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 SFMBT2Q5VUG0 894 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 MICAL1Q8TDZ2 1067 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 ST7Q9NRC1 585 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 SAMD9LQ8IVG5 1584 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 ITKQ08881 620 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 PPP2R5AQ15172 486 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 CFAP221Q4G0U5 840 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.72■□□□□ 0.11
TRAF1-201ENST00000373887 PPP4R1Q8TF05 950 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 LLPHQ9BRT6 129 aaKnown RBP15.72■□□□□ 0.11
TRAF1-201ENST00000373887 NBPF3Q9H094 633 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 ZCCHC11Q5TAX3 1644 aaKnown RBP15.72■□□□□ 0.11
TRAF1-201ENST00000373887 FRMD3A2A2Y4 597 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 CUTAO60888 179 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 ZNF202O95125 648 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 SETSIPP0DME0 302 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 ZNF75DP51815 510 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 KCTD2Q14681 263 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 ME3Q16798 604 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 HS1BP3Q53T59 392 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms