RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 TTF2Q9UNY4 1162 aaKnown RBP23.23■■□□□ 1.31
VEGFA-204ENST00000372064 FANCGO15287 622 aa23.23■■□□□ 1.31
VEGFA-204ENST00000372064 GABPAQ06546 454 aa23.23■■□□□ 1.31
VEGFA-204ENST00000372064 SEMA3FQ13275 785 aa23.23■■□□□ 1.31
VEGFA-204ENST00000372064 TOGARAM2Q6ZUX3 1019 aa23.23■■□□□ 1.31
VEGFA-204ENST00000372064 IGSF22Q8N9C0 903 aa23.23■■□□□ 1.31
VEGFA-204ENST00000372064 DNAI1Q9UI46 699 aa23.23■■□□□ 1.31
VEGFA-204ENST00000372064 ANKRD31Q8N7Z5 1873 aa23.23■■□□□ 1.31
VEGFA-204ENST00000372064 COL23A1Q86Y22 540 aaPredicted RBP23.22■■□□□ 1.31
VEGFA-204ENST00000372064 C6orf50Q9HD87 102 aa23.22■■□□□ 1.31
VEGFA-204ENST00000372064 SEC63Q9UGP8 760 aaKnown RBP23.22■■□□□ 1.31
VEGFA-204ENST00000372064 FRMPD2Q68DX3 1309 aaPredicted RBP23.22■■□□□ 1.31
VEGFA-204ENST00000372064 AKR1B1P15121 316 aa23.22■■□□□ 1.31
VEGFA-204ENST00000372064 GNA11P29992 359 aa23.22■■□□□ 1.31
VEGFA-204ENST00000372064 KCNB1Q14721 858 aa23.22■■□□□ 1.31
VEGFA-204ENST00000372064 NAA15Q9BXJ9 866 aaKnown RBP23.22■■□□□ 1.31
VEGFA-204ENST00000372064 MTMR4Q9NYA4 1195 aa23.22■■□□□ 1.31
VEGFA-204ENST00000372064 PDHBP11177 359 aa23.22■■□□□ 1.31
VEGFA-204ENST00000372064 RBL2Q08999 1139 aa23.22■■□□□ 1.31
VEGFA-204ENST00000372064 CLEC10AQ8IUN9 316 aa23.22■■□□□ 1.31
VEGFA-204ENST00000372064 LRRC47Q8N1G4 583 aaKnown RBP23.22■■□□□ 1.31
VEGFA-204ENST00000372064 NELFBQ8WX92 580 aa23.22■■□□□ 1.31
VEGFA-204ENST00000372064 AK8Q96MA6 479 aa23.22■■□□□ 1.31
VEGFA-204ENST00000372064 RIOX1Q9H6W3 641 aa23.22■■□□□ 1.31
VEGFA-204ENST00000372064 KBTBD4Q9NVX7 518 aa23.22■■□□□ 1.31
VEGFA-204ENST00000372064 SCNN1DP51172 638 aa23.21■■□□□ 1.31
VEGFA-204ENST00000372064 EIF6P56537 245 aaKnown RBP23.21■■□□□ 1.31
VEGFA-204ENST00000372064 SPAG1Q07617 926 aa23.21■■□□□ 1.31
VEGFA-204ENST00000372064 NONOQ15233 471 aaKnown RBP eCLIP23.21■■□□□ 1.313e-6■■■□□ 16.3
VEGFA-204ENST00000372064 KRT31Q15323 416 aa23.21■■□□□ 1.31
VEGFA-204ENST00000372064 NLGN1Q8N2Q7 840 aa23.21■■□□□ 1.31
VEGFA-204ENST00000372064 RASSF8Q8NHQ8 419 aa23.21■■□□□ 1.31
VEGFA-204ENST00000372064 PLIN2Q99541 437 aa23.21■■□□□ 1.31
VEGFA-204ENST00000372064 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.21■■□□□ 1.315e-8■■□□□ 14.3
VEGFA-204ENST00000372064 ESYT2A0FGR8 921 aa23.21■■□□□ 1.31
VEGFA-204ENST00000372064 UBA7P41226 1012 aa23.21■■□□□ 1.31
VEGFA-204ENST00000372064 LETM2Q2VYF4 491 aa23.21■■□□□ 1.31
VEGFA-204ENST00000372064 PPFIBP1Q86W92 1011 aa23.21■■□□□ 1.31
VEGFA-204ENST00000372064 NPR1P16066 1061 aa23.2■■□□□ 1.3
VEGFA-204ENST00000372064 PRCPP42785 496 aa23.2■■□□□ 1.3
VEGFA-204ENST00000372064 DPP8Q6V1X1 898 aaPredicted RBP23.2■■□□□ 1.3
VEGFA-204ENST00000372064 GDAQ9Y2T3 454 aa23.2■■□□□ 1.3
VEGFA-204ENST00000372064 NRXN2Q9P2S2 1712 aa23.2■■□□□ 1.3
VEGFA-204ENST00000372064 hCG_1984214I3L0E3 225 aa23.2■■□□□ 1.3
VEGFA-204ENST00000372064 SOGA3Q5TF21 947 aa23.2■■□□□ 1.3
VEGFA-204ENST00000372064 ADSSL1Q8N142 457 aa23.2■■□□□ 1.3
VEGFA-204ENST00000372064 ZNF713Q8N859 430 aaPredicted RBP23.2■■□□□ 1.3
VEGFA-204ENST00000372064 CUEDC2Q9H467 287 aa23.2■■□□□ 1.3
VEGFA-204ENST00000372064 USP40Q9NVE5 1235 aa23.2■■□□□ 1.3
VEGFA-204ENST00000372064 C10orf71Q711Q0 1435 aa23.2■■□□□ 1.3
VEGFA-204ENST00000372064 IGKV6D-41A0A0C4DH26 115 aa23.19■■□□□ 1.3
VEGFA-204ENST00000372064 KLRC4O43908 158 aa23.19■■□□□ 1.3
VEGFA-204ENST00000372064 MFAP3LO75121 409 aa23.19■■□□□ 1.3
VEGFA-204ENST00000372064 OR52Z1P0C646 297 aa23.19■■□□□ 1.3
VEGFA-204ENST00000372064 FECHP22830 423 aa23.19■■□□□ 1.3
VEGFA-204ENST00000372064 ORC2Q13416 577 aaPredicted RBP23.19■■□□□ 1.3
VEGFA-204ENST00000372064 MAGEF1Q9HAY2 307 aa23.19■■□□□ 1.3
VEGFA-204ENST00000372064 MAPK8IP1Q9UQF2 711 aa23.19■■□□□ 1.3
VEGFA-204ENST00000372064 CCNT1O60563 726 aaKnown RBP23.19■■□□□ 1.3
VEGFA-204ENST00000372064 TCP11X2Q5H9J9 407 aa23.19■■□□□ 1.3
VEGFA-204ENST00000372064 ELF2Q15723 593 aa23.19■■□□□ 1.3
VEGFA-204ENST00000372064 NEK8Q86SG6 692 aa23.19■■□□□ 1.3
VEGFA-204ENST00000372064 LRRC15Q8TF66 581 aa23.19■■□□□ 1.3
VEGFA-204ENST00000372064 FEZ1Q99689 392 aa23.19■■□□□ 1.3
VEGFA-204ENST00000372064 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.19■■□□□ 1.37e-7■■■□□ 15.9
VEGFA-204ENST00000372064 V9GYY5 206 aaPredicted RBP23.19■■□□□ 1.3
VEGFA-204ENST00000372064 SNHG28P0DPA3 235 aa23.18■■□□□ 1.3
VEGFA-204ENST00000372064 ZNF397Q8NF99 534 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-204ENST00000372064 CCDC51Q96ER9 411 aa23.18■■□□□ 1.3
VEGFA-204ENST00000372064 BIN2Q9UBW5 565 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-204ENST00000372064 RHOBTB3O94955 611 aa23.18■■□□□ 1.3
VEGFA-204ENST00000372064 GYPCP04921 128 aa23.18■■□□□ 1.3
VEGFA-204ENST00000372064 COPB1P53618 953 aaKnown RBP23.18■■□□□ 1.3
VEGFA-204ENST00000372064 KMT5BQ4FZB7 885 aa23.18■■□□□ 1.3
VEGFA-204ENST00000372064 JAKMIP3Q5VZ66 844 aa23.18■■□□□ 1.3
VEGFA-204ENST00000372064 PARP3Q9Y6F1 533 aa23.18■■□□□ 1.3
VEGFA-204ENST00000372064 KCNJ18B7U540 433 aa23.17■■□□□ 1.3
VEGFA-204ENST00000372064 H7C1D1 291 aa23.17■■□□□ 1.3
VEGFA-204ENST00000372064 KCNJ12Q14500 433 aa23.17■■□□□ 1.3
VEGFA-204ENST00000372064 CNGA4Q8IV77 575 aa23.17■■□□□ 1.3
VEGFA-204ENST00000372064 SRRTQ9BXP5 876 aaKnown RBP23.17■■□□□ 1.3
VEGFA-204ENST00000372064 SERPINB13Q9UIV8 391 aa23.17■■□□□ 1.3
VEGFA-204ENST00000372064 ASPRV1Q53RT3 343 aa23.17■■□□□ 1.3
VEGFA-204ENST00000372064 TBCKQ8TEA7 893 aa23.17■■□□□ 1.3
VEGFA-204ENST00000372064 AKT1S1Q96B36 256 aa23.17■■□□□ 1.3
VEGFA-204ENST00000372064 TMEM260Q9NX78 707 aa23.17■■□□□ 1.3
VEGFA-204ENST00000372064 SOWAHDA6NJG2 315 aa23.16■■□□□ 1.3
VEGFA-204ENST00000372064 MMP10P09238 476 aa23.16■■□□□ 1.3
VEGFA-204ENST00000372064 ALDH1B1P30837 517 aa23.16■■□□□ 1.3
VEGFA-204ENST00000372064 CCT6AP40227 531 aaKnown RBP23.16■■□□□ 1.3
VEGFA-204ENST00000372064 CDC42EP5Q6NZY7 148 aa23.16■■□□□ 1.3
VEGFA-204ENST00000372064 GIMAP8Q8ND71 665 aaPredicted RBP23.16■■□□□ 1.3
VEGFA-204ENST00000372064 LRRN4CLQ8ND94 238 aa23.16■■□□□ 1.3
VEGFA-204ENST00000372064 MYO3BQ8WXR4 1341 aa23.16■■□□□ 1.3
VEGFA-204ENST00000372064 CASP14P31944 242 aa23.16■■□□□ 1.3
VEGFA-204ENST00000372064 MTF1Q14872 753 aa23.16■■□□□ 1.3
VEGFA-204ENST00000372064 CABP7Q86V35 215 aa23.16■■□□□ 1.3
VEGFA-204ENST00000372064 REXO1Q8N1G1 1221 aaKnown RBP23.16■■□□□ 1.3
VEGFA-204ENST00000372064 ANKRD20A12PQ8NF67 263 aa23.16■■□□□ 1.3
VEGFA-204ENST00000372064 COA7Q96BR5 231 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms