RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 WDR18Q9BV38 432 aa14.81□□□□□ -0.04
LDB3-203ENST00000372056 TAF1DQ9H5J8 278 aaPredicted RBP14.81□□□□□ -0.04
LDB3-203ENST00000372056 MTMR7Q9Y216 660 aa14.81□□□□□ -0.04
LDB3-203ENST00000372056 ESPNB1AK53 854 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 C19orf81C9J6K1 198 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 ADCY5O95622 1261 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 GOLGA8HP0CJ92 632 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 FDX1P10109 184 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 BMP3P12645 472 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 GNA11P29992 359 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 IREB2P48200 963 aaKnown RBP14.8□□□□□ -0.04
LDB3-203ENST00000372056 CCDC96Q2M329 555 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 NOM1Q5C9Z4 860 aaKnown RBP14.8□□□□□ -0.04
LDB3-203ENST00000372056 USP17L2Q6R6M4 530 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 BTNL9Q6UXG8 535 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 KRT26Q7Z3Y9 468 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 LRRC47Q8N1G4 583 aaKnown RBP14.8□□□□□ -0.04
LDB3-203ENST00000372056 ZNF579Q8NAF0 562 aaKnown RBP14.8□□□□□ -0.04
LDB3-203ENST00000372056 KIAA1683Q9H0B3 1180 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 VCPKMTQ9H867 229 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 KIAA1468Q9P260 1216 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 NOL7Q9UMY1 257 aaKnown RBP14.8□□□□□ -0.04
LDB3-203ENST00000372056 SRPRBQ9Y5M8 271 aaKnown RBP14.8□□□□□ -0.04
LDB3-203ENST00000372056 PNMA6FA0A0J9YX94 578 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 AP5Z1O43299 807 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 BMP15O95972 392 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 ATP2B1P20020 1258 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 WWC2Q6AWC2 1192 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 TYW1BQ6NUM6 668 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 C11orf57Q6ZUT1 292 aaPredicted RBP14.8□□□□□ -0.04
LDB3-203ENST00000372056 SIAH1Q8IUQ4 282 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 RBM46Q8TBY0 533 aaKnown RBP14.8□□□□□ -0.04
LDB3-203ENST00000372056 ERCC4Q92889 916 aaPredicted RBP14.8□□□□□ -0.04
LDB3-203ENST00000372056 KLRG1Q96E93 195 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 RRAGDQ9NQL2 400 aaPredicted RBP14.8□□□□□ -0.04
LDB3-203ENST00000372056 ANO10Q9NW15 660 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 KCNH3Q9ULD8 1083 aa14.8□□□□□ -0.04
LDB3-203ENST00000372056 ESYT2A0FGR8 921 aa14.79□□□□□ -0.04
LDB3-203ENST00000372056 WNT7AO00755 349 aa14.79□□□□□ -0.04
LDB3-203ENST00000372056 ADAMTS3O15072 1205 aa14.79□□□□□ -0.04
LDB3-203ENST00000372056 TRAPPC10P48553 1259 aa14.79□□□□□ -0.04
LDB3-203ENST00000372056 GRIN1Q05586 938 aa14.79□□□□□ -0.04
LDB3-203ENST00000372056 BLIDQ8IZY5 108 aa14.79□□□□□ -0.04
LDB3-203ENST00000372056 UBE2Q2Q8WVN8 375 aa14.79□□□□□ -0.04
LDB3-203ENST00000372056 BARHL2Q9NY43 387 aa14.79□□□□□ -0.04
LDB3-203ENST00000372056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.78□□□□□ -0.04
LDB3-203ENST00000372056 STXBP3O00186 592 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 DAGLBQ8NCG7 672 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 C6orf50Q9HD87 102 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 FEM1BQ9UK73 627 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 PCDHA4Q9UN74 947 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 USP17L10C9JJH3 530 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 M0R2N6 131 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 ZBTB5O15062 677 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 WDR46O15213 610 aaKnown RBP14.78□□□□□ -0.04
LDB3-203ENST00000372056 NDUFB10O96000 172 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 MAP3K9P80192 1104 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 IQCB1Q15051 598 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 TTC38Q5R3I4 469 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 PIK3AP1Q6ZUJ8 805 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 HEATR3Q7Z4Q2 680 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 CLEC10AQ8IUN9 316 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 MTMR8Q96EF0 704 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 WRNIP1Q96S55 665 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 FEZ1Q99689 392 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 CPVLQ9H3G5 476 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 CCDC39Q9UFE4 941 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 CSADQ9Y600 493 aa14.78□□□□□ -0.04
LDB3-203ENST00000372056 ASTN2O75129 1339 aaPredicted RBP14.78□□□□□ -0.04
LDB3-203ENST00000372056 A0A087WWV3 80 aa14.77□□□□□ -0.05
LDB3-203ENST00000372056 STAT2P52630 851 aa14.77□□□□□ -0.05
LDB3-203ENST00000372056 RRP1BQ14684 758 aaKnown RBP14.77□□□□□ -0.05
LDB3-203ENST00000372056 SPECC1Q5M775 1068 aa14.77□□□□□ -0.05
LDB3-203ENST00000372056 ARMC9Q7Z3E5 817 aa14.77□□□□□ -0.05
LDB3-203ENST00000372056 ZSCAN30Q86W11 494 aa14.77□□□□□ -0.05
LDB3-203ENST00000372056 FAM13BQ9NYF5 915 aa14.77□□□□□ -0.05
LDB3-203ENST00000372056 FKBP1BP68106 108 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 ATP2C1P98194 919 aaPredicted RBP14.76□□□□□ -0.05
LDB3-203ENST00000372056 ZNF174Q15697 407 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 LONRF3Q496Y0 759 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 KRBA2Q6ZNG9 492 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 ELOA2Q8IYF1 753 aaPredicted RBP14.76□□□□□ -0.05
LDB3-203ENST00000372056 CEP57L1Q8IYX8 460 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 ZNF280CQ8ND82 737 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 FERMT2Q96AC1 680 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 ZMYND12Q9H0C1 365 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 CSRNP2Q9H175 543 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 ATAD5Q96QE3 1844 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 DOCK1Q14185 1865 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 SLURP2P0DP57 97 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 PLCB2Q00722 1185 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 ANKRD13AQ8IZ07 590 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 ADGRF4Q8IZF3 695 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.76□□□□□ -0.05
LDB3-203ENST00000372056 C12orf42Q96LP6 360 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 MAF1Q9H063 256 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 GPCPD1Q9NPB8 672 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 TUBE1Q9UJT0 475 aa14.76□□□□□ -0.05
LDB3-203ENST00000372056 A0A1W2PRG0 241 aa14.75□□□□□ -0.05
LDB3-203ENST00000372056 USP2O75604 605 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms