RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 RRP1BQ14684 758 aaKnown RBP12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 CT47A1Q5JQC4 288 aaPredicted RBP12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 PAXIP1Q6ZW49 1069 aaPredicted RBP12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 RSRC2Q7L4I2 434 aaKnown RBP12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 SAPCD2Q86UD0 394 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 CLMNQ96JQ2 1002 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 INCENPQ9NQS7 918 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 DACH1Q9UI36 760 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 HOOK1Q9UJC3 728 aaKnown RBP12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 CUTAO60888 179 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 PRDM1O75626 825 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 GDF11O95390 407 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 CDK8P49336 464 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 GUCY1B3Q02153 619 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 GABPAQ06546 454 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 GRM1Q13255 1194 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 BRD3Q15059 726 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 CC2D1AQ6P1N0 951 aaPredicted RBP12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 METTL16Q86W50 562 aaKnown RBP12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 MB21D2Q8IYB1 491 aaPredicted RBP12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 ANKRD13AQ8IZ07 590 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 NCOA7Q8NI08 942 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 BBXQ8WY36 941 aaPredicted RBP12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 ELP3Q9H9T3 547 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 MKNK2Q9HBH9 465 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 ZNF112Q9UJU3 913 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 PPP2R2CQ9Y2T4 447 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 CSADQ9Y600 493 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 TLL2Q9Y6L7 1015 aa12.98□□□□□ -0.33
TSPAN1-201ENST00000372003 A0A087WWV3 80 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 VWA3AA6NCI4 1184 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 CPLX1O14810 134 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 HSPA6P17066 643 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 SHMT1P34896 483 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 FOSBP53539 338 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 HNRNPH2P55795 449 aaKnown RBP12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 VGLL4Q14135 290 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 SHROOM1Q2M3G4 852 aaPredicted RBP12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 CERKLQ49MI3 558 aaPredicted RBP12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 LDLRAD1Q5T700 205 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 TATDN1Q6P1N9 297 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 C16orf86Q6ZW13 317 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 TMEM139Q8IV31 216 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 LRRN4CLQ8ND94 238 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 HNRNPLLQ8WVV9 542 aaKnown RBP12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 EXOC4Q96A65 974 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 SLC10A4Q96EP9 437 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 CARD6Q9BX69 1037 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 ARFGAP3Q9NP61 516 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 TOMM22Q9NS69 142 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 CWC15Q9P013 229 aaKnown RBP12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 SWAP70Q9UH65 585 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 MRFAP1Q9Y605 127 aa12.97□□□□□ -0.33
TSPAN1-201ENST00000372003 A0A0U1RQG5 324 aaPredicted RBP12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 CCDC151A5D8V7 595 aa12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 ERICH4A6NGS2 130 aa12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 MPHOSPH10O00566 681 aaKnown RBP12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 CTNND1O60716 968 aaKnown RBP12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 TBC1D8O95759 1140 aa12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 TUBBP07437 444 aa12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 CAP2P40123 477 aa12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 ZNF157P51786 506 aaPredicted RBP12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 PDE4BQ07343 736 aa12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 MKRN3Q13064 507 aaKnown RBP12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 RRP12Q5JTH9 1297 aaKnown RBP12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 RESP18Q5W5W9 173 aa12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 TRIML1Q8N9V2 468 aa12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 IQUBQ8NA54 791 aa12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 GOLGA1Q92805 767 aa12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 ERCC4Q92889 916 aaPredicted RBP12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 BAG1Q99933 345 aaPredicted RBP12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 ST7Q9NRC1 585 aa12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 NAP1L2Q9ULW6 460 aaPredicted RBP12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 HPS5Q9UPZ3 1129 aa12.96□□□□□ -0.33
TSPAN1-201ENST00000372003 ZMYM6O95789 1325 aa12.96□□□□□ -0.34
TSPAN1-201ENST00000372003 KLF18A0A0U1RQI7 1052 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 PRC1O43663 620 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 JAG1P78504 1218 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 PPP2R3AQ06190 1150 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 PTPAQ15257 358 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 DEFB115Q30KQ5 88 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 RGMBQ6NW40 437 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 CPLX2Q6PUV4 134 aaKnown RBP12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 CCDC84Q86UT8 332 aaPredicted RBP12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 ZNF444Q8N0Y2 327 aaPredicted RBP12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 CNKSR2Q8WXI2 1034 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 NAA15Q9BXJ9 866 aaKnown RBP12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 PICK1Q9NRD5 415 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 ANAPC4Q9UJX5 808 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 TACC3Q9Y6A5 838 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 GOLGA8BA8MQT2 603 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 BIN1O00499 593 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 GH2P01242 217 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 ATP1A3P13637 1013 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 SMC1AQ14683 1233 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms