RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 HOXD10P28358 340 aa18.52■□□□□ 0.56
PFDN4-201ENST00000371419 GNAQP50148 359 aa18.52■□□□□ 0.56
PFDN4-201ENST00000371419 RCAN1P53805 252 aa18.52■□□□□ 0.56
PFDN4-201ENST00000371419 TOB2Q14106 344 aaPredicted RBP18.52■□□□□ 0.56
PFDN4-201ENST00000371419 WDR78Q5VTH9 848 aa18.52■□□□□ 0.56
PFDN4-201ENST00000371419 SNRNP48Q6IEG0 339 aaKnown RBP18.52■□□□□ 0.56
PFDN4-201ENST00000371419 CCDC174Q6PII3 467 aa18.52■□□□□ 0.56
PFDN4-201ENST00000371419 NCAPG2Q86XI2 1143 aa18.52■□□□□ 0.56
PFDN4-201ENST00000371419 RAB11FIP4Q86YS3 637 aa18.52■□□□□ 0.56
PFDN4-201ENST00000371419 CCDC144CPQ8IYA2 1237 aa18.52■□□□□ 0.56
PFDN4-201ENST00000371419 FANCBQ8NB91 859 aa18.52■□□□□ 0.56
PFDN4-201ENST00000371419 LZTS2Q9BRK4 669 aa18.52■□□□□ 0.56
PFDN4-201ENST00000371419 NAP1L2Q9ULW6 460 aaPredicted RBP18.52■□□□□ 0.56
PFDN4-201ENST00000371419 MGAMO43451 1857 aa18.52■□□□□ 0.56
PFDN4-201ENST00000371419 ZSWIM8A7E2V4 1837 aa18.52■□□□□ 0.55
PFDN4-201ENST00000371419 ZNF536O15090 1300 aa18.52■□□□□ 0.55
PFDN4-201ENST00000371419 EVCP57679 992 aa18.52■□□□□ 0.55
PFDN4-201ENST00000371419 GPR142Q7Z601 462 aa18.52■□□□□ 0.55
PFDN4-201ENST00000371419 PLEKHH3Q7Z736 793 aa18.52■□□□□ 0.55
PFDN4-201ENST00000371419 ANP32EQ9BTT0 268 aa18.52■□□□□ 0.55
PFDN4-201ENST00000371419 ALDH8A1Q9H2A2 487 aaPredicted RBP18.52■□□□□ 0.55
PFDN4-201ENST00000371419 JMJD4Q9H9V9 463 aa18.52■□□□□ 0.55
PFDN4-201ENST00000371419 VAT1LQ9HCJ6 419 aa18.52■□□□□ 0.55
PFDN4-201ENST00000371419 GOLGA8BA8MQT2 603 aa18.51■□□□□ 0.55
PFDN4-201ENST00000371419 ICAM1P05362 532 aa18.51■□□□□ 0.55
PFDN4-201ENST00000371419 SLC4A3P48751 1232 aa18.51■□□□□ 0.55
PFDN4-201ENST00000371419 NEK4P51957 841 aa18.51■□□□□ 0.55
PFDN4-201ENST00000371419 PRMT2P55345 433 aa18.51■□□□□ 0.55
PFDN4-201ENST00000371419 AGBL1Q96MI9 1066 aa18.51■□□□□ 0.55
PFDN4-201ENST00000371419 RBM28Q9NW13 759 aaKnown RBP18.51■□□□□ 0.55
PFDN4-201ENST00000371419 SRRDQ9UH36 339 aa18.51■□□□□ 0.55
PFDN4-201ENST00000371419 PNMA2Q9UL42 364 aa18.51■□□□□ 0.55
PFDN4-201ENST00000371419 IVNS1ABPQ9Y6Y0 642 aa18.51■□□□□ 0.55
PFDN4-201ENST00000371419 GOLGA8AA7E2F4 631 aa18.5■□□□□ 0.55
PFDN4-201ENST00000371419 SMARCA1P28370 1054 aa18.5■□□□□ 0.55
PFDN4-201ENST00000371419 PPP2R5BQ15173 497 aa18.5■□□□□ 0.55
PFDN4-201ENST00000371419 ANKRD1Q15327 319 aa18.5■□□□□ 0.55
PFDN4-201ENST00000371419 PKN2Q16513 984 aaKnown RBP18.5■□□□□ 0.55
PFDN4-201ENST00000371419 CDC37Q16543 378 aaPredicted RBP18.5■□□□□ 0.55
PFDN4-201ENST00000371419 RTN1Q16799 776 aa18.5■□□□□ 0.55
PFDN4-201ENST00000371419 KIF2CQ99661 725 aa18.5■□□□□ 0.55
PFDN4-201ENST00000371419 RIOX1Q9H6W3 641 aa18.5■□□□□ 0.55
PFDN4-201ENST00000371419 CCPG1Q9ULG6 757 aa18.5■□□□□ 0.55
PFDN4-201ENST00000371419 RIPK3Q9Y572 518 aa18.5■□□□□ 0.55
PFDN4-201ENST00000371419 STRNO43815 780 aa18.49■□□□□ 0.55
PFDN4-201ENST00000371419 PLEKHA8P1O95397 391 aa18.49■□□□□ 0.55
PFDN4-201ENST00000371419 METAP2P50579 478 aaKnown RBP eCLIP18.49■□□□□ 0.55
PFDN4-201ENST00000371419 PRKCZQ05513 592 aa18.49■□□□□ 0.55
PFDN4-201ENST00000371419 SLC35G1Q2M3R5 365 aa18.49■□□□□ 0.55
PFDN4-201ENST00000371419 TKFCQ3LXA3 575 aa18.49■□□□□ 0.55
PFDN4-201ENST00000371419 NBPF11Q86T75 865 aa18.49■□□□□ 0.55
PFDN4-201ENST00000371419 SPZ1Q9BXG8 430 aa18.49■□□□□ 0.55
PFDN4-201ENST00000371419 DOCK3Q8IZD9 2030 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 CCDC196A0A1B0GTZ2 297 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 CYTH3O43739 400 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 PTPREP23469 700 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 PDIA3P30101 505 aaKnown RBP18.48■□□□□ 0.55
PFDN4-201ENST00000371419 AK2P54819 239 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 QRICH1Q2TAL8 776 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 TMTC3Q6ZXV5 915 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 SRBD1Q8N5C6 995 aaKnown RBP18.48■□□□□ 0.55
PFDN4-201ENST00000371419 CHST13Q8NET6 341 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 SOCS4Q8WXH5 440 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 MTMR8Q96EF0 704 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 ZNF274Q96GC6 653 aaPredicted RBP18.48■□□□□ 0.55
PFDN4-201ENST00000371419 FBXO40Q9UH90 709 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 GJD2Q9UKL4 321 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 HPS5Q9UPZ3 1129 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 PTPN22Q9Y2R2 807 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 NID2Q14112 1375 aa18.48■□□□□ 0.55
PFDN4-201ENST00000371419 SLC15A5A6NIM6 579 aa18.47■□□□□ 0.55
PFDN4-201ENST00000371419 ZBTB5O15062 677 aa18.47■□□□□ 0.55
PFDN4-201ENST00000371419 FCER1AP12319 257 aa18.47■□□□□ 0.55
PFDN4-201ENST00000371419 ALAS1P13196 640 aa18.47■□□□□ 0.55
PFDN4-201ENST00000371419 FLT3LGP49771 235 aa18.47■□□□□ 0.55
PFDN4-201ENST00000371419 MORN1Q5T089 497 aa18.47■□□□□ 0.55
PFDN4-201ENST00000371419 COL13A1Q5TAT6 717 aaPredicted RBP18.47■□□□□ 0.55
PFDN4-201ENST00000371419 ABRAQ8N0Z2 381 aa18.47■□□□□ 0.55
PFDN4-201ENST00000371419 TRERF1Q96PN7 1200 aa18.47■□□□□ 0.55
PFDN4-201ENST00000371419 NUDT12Q9BQG2 462 aa18.47■□□□□ 0.55
PFDN4-201ENST00000371419 LARP6Q9BRS8 491 aaKnown RBP18.47■□□□□ 0.55
PFDN4-201ENST00000371419 HOMER2Q9NSB8 354 aa18.47■□□□□ 0.55
PFDN4-201ENST00000371419 RNF146Q9NTX7 359 aa18.47■□□□□ 0.55
PFDN4-201ENST00000371419 GABRQQ9UN88 632 aa18.47■□□□□ 0.55
PFDN4-201ENST00000371419 BAZ2BQ9UIF8 2168 aaKnown RBP18.46■□□□□ 0.55
PFDN4-201ENST00000371419 GRB14Q14449 540 aa18.46■□□□□ 0.55
PFDN4-201ENST00000371419 RABEP1Q15276 862 aa18.46■□□□□ 0.55
PFDN4-201ENST00000371419 FBXO46Q6PJ61 603 aaPredicted RBP18.46■□□□□ 0.55
PFDN4-201ENST00000371419 FBXO11Q86XK2 927 aa18.46■□□□□ 0.55
PFDN4-201ENST00000371419 HOMER1Q86YM7 354 aa18.46■□□□□ 0.55
PFDN4-201ENST00000371419 CMTR1Q8N1G2 835 aaKnown RBP18.46■□□□□ 0.55
PFDN4-201ENST00000371419 RRP36Q96EU6 259 aaKnown RBP18.46■□□□□ 0.55
PFDN4-201ENST00000371419 PIGSQ96S52 555 aa18.46■□□□□ 0.55
PFDN4-201ENST00000371419 MMP19Q99542 508 aa18.46■□□□□ 0.55
PFDN4-201ENST00000371419 ACAD9Q9H845 621 aa18.46■□□□□ 0.55
PFDN4-201ENST00000371419 FAM217BQ9NTX9 383 aaPredicted RBP18.46■□□□□ 0.55
PFDN4-201ENST00000371419 PNMA6FA0A0J9YX94 578 aa18.46■□□□□ 0.54
PFDN4-201ENST00000371419 CDC27P30260 824 aa18.46■□□□□ 0.54
PFDN4-201ENST00000371419 IRF5Q13568 498 aa18.46■□□□□ 0.54
PFDN4-201ENST00000371419 KCTD2Q14681 263 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms