RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 CRACR2BQ8N4Y2 399 aaPredicted RBP11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 TCP11Q8WWU5 503 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 ESR2Q92731 530 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 RMND1Q9NWS8 449 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 GEMIN8Q9NWZ8 242 aaKnown RBP11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 NWD1Q149M9 1564 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 TSPY2A6NKD2 308 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 PPP1R7Q15435 360 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 CCDC40Q4G0X9 1142 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 DYDC1Q8WWB3 177 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 STX8Q9UNK0 236 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 LLGL1Q15334 1064 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 DTHD1Q6ZMT9 781 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 AGXT2Q9BYV1 514 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 RIPOR2Q9Y4F9 1068 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 CRYBG1Q9Y4K1 1723 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 IFNAR1P17181 557 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 LETM2Q2VYF4 491 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 MB21D1Q8N884 522 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 CNNM2Q9H8M5 875 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 GGT7Q9UJ14 662 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 EIF3HO15372 352 aaKnown RBP eCLIP11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 CEP104O60308 925 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 ADD2P35612 726 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 ARHGAP25P42331 645 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 BICDL1Q6ZP65 573 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 MARCH10Q8NA82 808 aaPredicted RBP11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 IGDCC4Q8TDY8 1250 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 UBXN6Q9BZV1 441 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 DPH5Q9H2P9 285 aa11.58□□□□□ -0.56
PRPF38B-201ENST00000370021 PPP1R3GB7ZBB8 358 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 GOLGA8KD6RF30 607 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 EIF4A3P38919 411 aaKnown RBP11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 CARSP49589 748 aaKnown RBP11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 BCAMP50895 628 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 RAPGEF1Q13905 1077 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 TCERG1LQ5VWI1 586 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 IFT20Q8IY31 132 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 SPATA4Q8NEY3 305 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 RNPC3Q96LT9 517 aaKnown RBP11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 VEZTQ9HBM0 779 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 TCP11L1Q9NUJ3 509 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 KRT18P05783 430 aaKnown RBP11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 NR1D1P20393 614 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 TMOD1P28289 359 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 LRRC41Q15345 812 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 LCORLQ8N3X6 602 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 UBA5Q9GZZ9 404 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 FOXP1Q9H334 677 aaPredicted RBP11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 RNF41Q9H4P4 317 aaPredicted RBP11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 IRS4O14654 1257 aaPredicted RBP11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 NMT2O60551 498 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 PHKG2P15735 406 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 IFNAR2P48551 515 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 DZIP3Q86Y13 1208 aaKnown RBP11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 DNAAF5Q86Y56 855 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 ZIM3Q96PE6 472 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 GOLPH3Q9H4A6 298 aa11.57□□□□□ -0.56
PRPF38B-201ENST00000370021 RCCD1A6NED2 376 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 NBPF26B4DH59 902 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 KIF4AO95239 1232 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 VIMP08670 466 aaKnown RBP11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 CTNNA1P35221 906 aaKnown RBP11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 HDLBPQ00341 1268 aaKnown RBP11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 MDM2Q00987 491 aaPredicted RBP11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 TRIM14Q14142 442 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 INF2Q27J81 1249 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 KRT71Q3SY84 523 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 NBPF10Q6P3W6 841 aaKnown RBP11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 SAMD1Q6SPF0 538 aaPredicted RBP11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 AMOTL1Q8IY63 956 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 NBPF15Q8N660 670 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 AP1M1Q9BXS5 423 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 MYO1AQ9UBC5 1043 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 SOS2Q07890 1332 aaPredicted RBP11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 TMEM2Q9UHN6 1383 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 HIBCHQ6NVY1 386 aaPredicted RBP11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 TSEN2Q8NCE0 465 aaKnown RBP11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 MICAL1Q8TDZ2 1067 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 CNOT6LQ96LI5 555 aaKnown RBP11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 STK38LQ9Y2H1 464 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 CEP83Q9Y592 693 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 WNT7AO00755 349 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 KCNK3O14649 394 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 CDC25CP30307 473 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 GFPT1Q06210 699 aaPredicted RBP11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 DDX42Q86XP3 938 aaKnown RBP eCLIP11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 TRIM58Q8NG06 486 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 MGARPQ8TDB4 240 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 STRBPQ96SI9 672 aaKnown RBP11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 CAPN6Q9Y6Q1 641 aa11.56□□□□□ -0.56
PRPF38B-201ENST00000370021 H7C1D1 291 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 H7C1W4 665 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 GCOM1H8Y6P7 765 aaPredicted RBP11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 MYZAPP0CAP1 466 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 SLC5A1P13866 664 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 HERVK_113P62684 666 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 CFAP221Q4G0U5 840 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 TRAPPC11Q7Z392 1133 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms