RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 GRIN3BO60391 1043 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.69□□□□□ -0.38
VANGL1-203ENST00000369509 SPICE1Q8N0Z3 855 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 BICD2Q8TD16 824 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 RASGRP4Q8TDF6 673 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 COA7Q96BR5 231 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 SH2D4AQ9H788 454 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 SMCO2A6NFE2 343 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 TMEM232C9JQI7 657 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 NR1I2O75469 434 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 PTMAP06454 111 aaKnown RBP12.69□□□□□ -0.38
VANGL1-203ENST00000369509 TRAPPC10P48553 1259 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 QRICH1Q2TAL8 776 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 DPY19L2Q6NUT2 758 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 PIK3AP1Q6ZUJ8 805 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 GLTPD2A6NH11 291 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 MARCKSP29966 332 aaPredicted RBP12.68□□□□□ -0.38
VANGL1-203ENST00000369509 CDC37Q16543 378 aaPredicted RBP12.68□□□□□ -0.38
VANGL1-203ENST00000369509 SYDE2Q5VT97 1194 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 CCAR1Q8IX12 1150 aaKnown RBP12.68□□□□□ -0.38
VANGL1-203ENST00000369509 SCYL3Q8IZE3 742 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 ENGASEQ8NFI3 743 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 C6orf50Q9HD87 102 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 DACT1Q9NYF0 836 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 FZD1Q9UP38 647 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 ZKSCAN5Q9Y2L8 839 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 RBBP6Q7Z6E9 1792 aaKnown RBP12.68□□□□□ -0.38
VANGL1-203ENST00000369509 TRIM75PA6NK02 468 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 PLA2G6O60733 806 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 GNA11P29992 359 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 STAT2P52630 851 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 SNW1Q13573 536 aaKnown RBP12.68□□□□□ -0.38
VANGL1-203ENST00000369509 FAM83BQ5T0W9 1011 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 USP50Q70EL3 339 aaPredicted RBP12.68□□□□□ -0.38
VANGL1-203ENST00000369509 MRPS27Q92552 414 aaKnown RBP12.68□□□□□ -0.38
VANGL1-203ENST00000369509 KLRG1Q96E93 195 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 WRNIP1Q96S55 665 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 KIAA1683Q9H0B3 1180 aa12.68□□□□□ -0.38
VANGL1-203ENST00000369509 FBXO2Q9UK22 296 aaPredicted RBP12.68□□□□□ -0.38
VANGL1-203ENST00000369509 COL11A1P12107 1806 aaPredicted RBP12.67□□□□□ -0.38
VANGL1-203ENST00000369509 ADM5C9JUS6 153 aa12.67□□□□□ -0.38
VANGL1-203ENST00000369509 ZNF500O60304 480 aaPredicted RBP12.67□□□□□ -0.38
VANGL1-203ENST00000369509 TPM2P07951 284 aa12.67□□□□□ -0.38
VANGL1-203ENST00000369509 ZYXQ15942 572 aaKnown RBP12.67□□□□□ -0.38
VANGL1-203ENST00000369509 TTC38Q5R3I4 469 aa12.67□□□□□ -0.38
VANGL1-203ENST00000369509 JMYQ8N9B5 988 aa12.67□□□□□ -0.38
VANGL1-203ENST00000369509 FSIP1Q8NA03 581 aa12.67□□□□□ -0.38
VANGL1-203ENST00000369509 DDX19AQ9NUU7 478 aaKnown RBP12.67□□□□□ -0.38
VANGL1-203ENST00000369509 PRR12Q9ULL5 1215 aa12.67□□□□□ -0.38
VANGL1-203ENST00000369509 FAM237AA0A1B0GTK4 181 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 OFD1O75665 1012 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 PTPREP23469 700 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 EPHX2P34913 555 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 CLK2P49760 499 aaKnown RBP12.66□□□□□ -0.38
VANGL1-203ENST00000369509 FAM160A1Q05DH4 1040 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 SUPT20HL1Q3ZLR7 823 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 NOL9Q5SY16 702 aaKnown RBP12.66□□□□□ -0.38
VANGL1-203ENST00000369509 DLK2Q6UY11 383 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 REXO1Q8N1G1 1221 aaKnown RBP12.66□□□□□ -0.38
VANGL1-203ENST00000369509 ZKSCAN4Q969J2 545 aaPredicted RBP12.66□□□□□ -0.38
VANGL1-203ENST00000369509 RIC8AQ9NPQ8 531 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 CEP131Q9UPN4 1083 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 LOC285556D6RIA3 1793 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 CCDC194A0A1B0GVG4 234 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 POTECB2RU33 542 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 CUTAO60888 179 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 PTPRAP18433 802 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 ATP2B1P20020 1258 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 CMA1P23946 247 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 ADCY7P51828 1080 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 SHC4Q6S5L8 630 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 KRT25Q7Z3Z0 450 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 FMR1NBQ8N0W7 255 aaPredicted RBP12.66□□□□□ -0.38
VANGL1-203ENST00000369509 KRI1Q8N9T8 703 aaKnown RBP12.66□□□□□ -0.38
VANGL1-203ENST00000369509 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.66□□□□□ -0.38
VANGL1-203ENST00000369509 DCPSQ96C86 337 aaKnown RBP12.66□□□□□ -0.38
VANGL1-203ENST00000369509 CLIC6Q96NY7 704 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 WDR18Q9BV38 432 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 CLSTN2Q9H4D0 955 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 MRVI1Q9Y6F6 885 aa12.66□□□□□ -0.38
VANGL1-203ENST00000369509 A0A1B0GVL5 298 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 BMP15O95972 392 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 NDUFA8P51970 172 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 SNAP25P60880 206 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 ATP2C1P98194 919 aaPredicted RBP12.65□□□□□ -0.38
VANGL1-203ENST00000369509 GRIN1Q05586 938 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 IKQ13123 557 aaPredicted RBP12.65□□□□□ -0.38
VANGL1-203ENST00000369509 DGKZQ13574 1117 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 RESP18Q5W5W9 173 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 CCDC73Q6ZRK6 1079 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 RBM43Q6ZSC3 357 aaKnown RBP12.65□□□□□ -0.38
VANGL1-203ENST00000369509 SULF1Q8IWU6 871 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 ZC3H15Q8WU90 426 aaKnown RBP12.65□□□□□ -0.38
VANGL1-203ENST00000369509 LPAR1Q92633 364 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 PKNOX2Q96KN3 472 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 FEZ1Q99689 392 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 NUP62CLQ9H1M0 184 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 RANBP17Q9H2T7 1088 aaKnown RBP12.65□□□□□ -0.38
VANGL1-203ENST00000369509 HPSEQ9Y251 543 aa12.65□□□□□ -0.38
VANGL1-203ENST00000369509 SRPRBQ9Y5M8 271 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms