RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 SLC4A7Q9Y6M7 1214 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 NVLO15381 856 aaKnown RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 ANKRD20A3Q5VUR7 823 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 KAT2BQ92831 832 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 CHMP6Q96FZ7 201 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 TCEANC2Q96MN5 208 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 NOX5Q96PH1 765 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 TMA7Q9Y2S6 64 aaKnown RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 SH3GLB1Q9Y371 365 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 U3KPZ7 1027 aaPredicted RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 NPATQ14207 1427 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 ENC1O14682 589 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 KRT4P19013 534 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 CADPS2Q86UW7 1296 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 ABHD8Q96I13 439 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 PLEKHG4BQ96PX9 1271 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 PSMB7Q99436 277 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 CDC5LQ99459 802 aaKnown RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 DMAP1Q9NPF5 467 aaPredicted RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 TBC1D23Q9NUY8 699 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 SEPT11Q9NVA2 429 aaKnown RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 FBXO9Q9UK97 447 aaPredicted RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 RBM8AQ9Y5S9 174 aaKnown RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 ZBTB7BO15156 539 aaPredicted RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 PDE6CP51160 858 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 ESRRGP62508 458 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 HDLBPQ00341 1268 aaKnown RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 GLE1Q53GS7 698 aaKnown RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 MAP3K21Q5TCX8 1036 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 CRELD2Q6UXH1 353 aaPredicted RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 SIX5Q8N196 739 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 MSANTD4Q8NCY6 345 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 KRT23Q9C075 422 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 TBX22Q9Y458 520 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 KDM6BO15054 1643 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 KCNA4P22459 653 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 NUGGCQ68CJ6 796 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 ARHGEF25Q86VW2 580 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 PRPF31Q8WWY3 499 aaKnown RBP11.41□□□□□ -0.58
PRDM1-201ENST00000369089 PHACTR3Q96KR7 559 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 TRAPPC9Q96Q05 1148 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 RAB17Q9H0T7 212 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 CEP126Q9P2H0 1117 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 ATP8A1Q9Y2Q0 1164 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 ATP10AO60312 1499 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 CCT8L1PA6NM43 557 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 E7ENQ6 273 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 STK10O94804 968 aaKnown RBP11.41□□□□□ -0.58
PRDM1-201ENST00000369089 S100A1P23297 94 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 FAM186BQ8IYM0 893 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 C8orf58Q8NAV2 365 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 MYCBPAPQ8TBZ2 947 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 TRIM47Q96LD4 638 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 FAM192AQ9GZU8 254 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 RMND1Q9NWS8 449 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 NDUFA13Q9P0J0 144 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 CFAP65Q6ZU64 1925 aaKnown RBP11.41□□□□□ -0.58
PRDM1-201ENST00000369089 WDR46O15213 610 aaKnown RBP11.41□□□□□ -0.58
PRDM1-201ENST00000369089 BLVRAP53004 296 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 SYNCQ9H7C4 482 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 CPA1P15085 419 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 PSMC1P62191 440 aaKnown RBP11.41□□□□□ -0.58
PRDM1-201ENST00000369089 C2orf54Q08AI8 447 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 NMIQ13287 307 aaPredicted RBP11.41□□□□□ -0.58
PRDM1-201ENST00000369089 SSH2Q76I76 1423 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 ANKRD42Q8N9B4 389 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 MPP4Q96JB8 637 aa11.41□□□□□ -0.58
PRDM1-201ENST00000369089 PHAXQ9H814 394 aaKnown RBP11.41□□□□□ -0.58
PRDM1-201ENST00000369089 TMEM110-MUSTN1A8MSY1 372 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 KRT14P02533 472 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 ACADSP16219 412 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 STMN1P16949 149 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 KCNA6P17658 529 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 HSPA9P38646 679 aaKnown RBP11.4□□□□□ -0.58
PRDM1-201ENST00000369089 PPP2R2AP63151 447 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 RNASELQ05823 741 aaKnown RBP11.4□□□□□ -0.58
PRDM1-201ENST00000369089 RSRC2Q7L4I2 434 aaKnown RBP11.4□□□□□ -0.58
PRDM1-201ENST00000369089 SCYL3Q8IZE3 742 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 FNBP4Q8N3X1 1017 aaPredicted RBP11.4□□□□□ -0.58
PRDM1-201ENST00000369089 EVI5LQ96CN4 794 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 PYM1Q9BRP8 204 aaKnown RBP11.4□□□□□ -0.58
PRDM1-201ENST00000369089 EPB41L5Q9HCM4 733 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 BTBD7Q9P203 1132 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 EPN1Q9Y6I3 576 aaPredicted RBP11.4□□□□□ -0.58
PRDM1-201ENST00000369089 ABCC1P33527 1531 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 NDC80O14777 642 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 HEXIM1O94992 359 aaKnown RBP11.4□□□□□ -0.58
PRDM1-201ENST00000369089 SKOR1P84550 965 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 ADCY1Q08828 1119 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 KPNB1Q14974 876 aaKnown RBP11.4□□□□□ -0.58
PRDM1-201ENST00000369089 DPCR1Q3MIW9 517 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 BEND3Q5T5X7 828 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 ADALQ6DHV7 355 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 TOGARAM2Q6ZUX3 1019 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 UBE2Q1Q7Z7E8 422 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 GSPT2Q8IYD1 628 aaKnown RBP11.4□□□□□ -0.58
PRDM1-201ENST00000369089 PANX2Q96RD6 677 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 MAF1Q9H063 256 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 TACC3Q9Y6A5 838 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 RAD21O60216 631 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms