RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 ATRXP46100 2492 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 ANKRD11Q6UB99 2663 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 FZD6O60353 706 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 XYLBO75191 536 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 RLBP1P12271 317 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 TRIM27P14373 513 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 GPTP24298 496 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 IL13P35225 146 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 MRE11P49959 708 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 LACTBP83111 547 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 TCIRG1Q13488 830 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 GAS6Q14393 721 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 MAP3K11Q16584 847 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 L1TD1Q5T7N2 865 aaKnown RBP7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 FAM43AQ8N2R8 423 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 SSH1Q8WYL5 1049 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 GSX2Q9BZM3 304 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 API5Q9BZZ5 524 aaKnown RBP7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 UBE2OQ9C0C9 1292 aaKnown RBP7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 ANGEL1Q9UNK9 670 aaKnown RBP7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 LAS1LQ9Y4W2 734 aaKnown RBP7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 DLG5Q8TDM6 1919 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 VPS13AQ96RL7 3174 aa7.91□□□□□ -1.14
ECHDC1-202ENST00000368289 BBOX1O75936 387 aa7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 ZNF853P0CG23 659 aa7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 GRK4P32298 578 aa7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 NUCB1Q02818 461 aa7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 SLC10A5Q5PT55 438 aa7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 PDE12Q6L8Q7 609 aaKnown RBP7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 ZSCAN29Q8IWY8 852 aaPredicted RBP7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 TTC5Q8N0Z6 440 aa7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 SNX21Q969T3 373 aa7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 CNTNAP3BQ96NU0 1288 aa7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 P2RX7Q99572 595 aaKnown RBP7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 CNTNAP3Q9BZ76 1288 aa7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 EPHX3Q9H6B9 360 aa7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 NOB1Q9ULX3 412 aaKnown RBP7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 RIPOR2Q9Y4F9 1068 aa7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 KCNMB2Q9Y691 235 aa7.9□□□□□ -1.14
ECHDC1-202ENST00000368289 SETXQ7Z333 2677 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 WNT10BO00744 389 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 ARAFP10398 606 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 MAPK1P28482 360 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 GMPRP36959 345 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 RBM25P49756 843 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 MARSP56192 900 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 GPSM2P81274 684 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 BMP2KLQ5H9B9 411 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 TMCO4Q5TGY1 634 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 XKR5Q6UX68 686 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 TTLL7Q6ZT98 887 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 ARMC9Q7Z3E5 817 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 ITPRIPQ8IWB1 547 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 ZNF34Q8IZ26 560 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 BHMTQ93088 406 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 FMNL2Q96PY5 1086 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 MXD3Q9BW11 206 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 RBCK1Q9BYM8 510 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 NYXQ9GZU5 481 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 SRRDQ9UH36 339 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 GDF2Q9UK05 429 aaPredicted RBP7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 USP20Q9Y2K6 914 aa7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 TPRP12270 2363 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-202ENST00000368289 IBTKQ9P2D0 1353 aaPredicted RBP7.88□□□□□ -1.15
ECHDC1-202ENST00000368289 VAMP4O75379 141 aa7.88□□□□□ -1.15
ECHDC1-202ENST00000368289 ZNF468Q5VIY5 522 aaPredicted RBP7.88□□□□□ -1.15
ECHDC1-202ENST00000368289 DMRTB1Q96MA1 342 aa7.88□□□□□ -1.15
ECHDC1-202ENST00000368289 UHRF1Q96T88 793 aaPredicted RBP7.88□□□□□ -1.15
ECHDC1-202ENST00000368289 SLC30A3Q99726 388 aa7.88□□□□□ -1.15
ECHDC1-202ENST00000368289 CHMP4AQ9BY43 222 aa7.88□□□□□ -1.15
ECHDC1-202ENST00000368289 C22orf23Q9BZE7 217 aa7.88□□□□□ -1.15
ECHDC1-202ENST00000368289 CHMP5Q9NZZ3 219 aa7.88□□□□□ -1.15
ECHDC1-202ENST00000368289 LRRC37AA6NMS7 1700 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 C2CD2LO14523 706 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 SIN3BO75182 1162 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 SASH3O75995 380 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 RARAP10276 462 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 FOSL2P15408 326 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 ADH6P28332 368 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 GRNP28799 593 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 PRKAR2BP31323 418 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 PCSK7Q16549 785 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 RNFT1Q5M7Z0 435 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 TTC39BQ5VTQ0 682 aaPredicted RBP7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 ZNF438Q7Z4V0 828 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 SYT9Q86SS6 491 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 CHD1LQ86WJ1 897 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 GJD3Q8N144 294 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 TMEM57Q8N5G2 664 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 GOLGA6L1Q8N7Z2 621 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 AGBL3Q8NEM8 1001 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 TSR2Q969E8 191 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 ZBED3Q96IU2 234 aaPredicted RBP7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 ASB2Q96Q27 587 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 ANTXR1Q9H6X2 564 aa7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 PAK6Q9NQU5 681 aaPredicted RBP7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 SIPA1L3O60292 1781 aaPredicted RBP7.87□□□□□ -1.15
ECHDC1-202ENST00000368289 NCOR2Q9Y618 2525 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 PTPRCP08575 1304 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms