RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 PABPC4Q13310 644 aaKnown RBP eCLIP14.22□□□□□ -0.13
PTPRK-207ENST00000368226 SLFNL1Q499Z3 407 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 PPM1KQ8N3J5 372 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 DDAH1O94760 285 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 TMTC1Q8IUR5 882 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 SLFN12Q8IYM2 578 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 SMYD4Q8IYR2 804 aaPredicted RBP14.22□□□□□ -0.13
PTPRK-207ENST00000368226 MGARPQ8TDB4 240 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 PIGSQ96S52 555 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 BRD1O95696 1058 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 DMP1Q13316 513 aaPredicted RBP14.22□□□□□ -0.13
PTPRK-207ENST00000368226 MCF2L2Q86YR7 1114 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 CCDC125Q86Z20 511 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 IFNB1P01574 187 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 GOLGA8FQ08AF8 430 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 GOLGA8DPQ0D2H9 430 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 KRT81Q14533 505 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 NLRP10Q86W26 655 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 TM6SF1Q9BZW5 370 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 MTMR6Q9Y217 621 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 ITKQ08881 620 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 SETDB1Q15047 1291 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 NKX1-1Q15270 411 aaPredicted RBP14.21□□□□□ -0.13
PTPRK-207ENST00000368226 LRRC41Q15345 812 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 SUSD4Q5VX71 490 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 CCDC110Q8TBZ0 833 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 VPS37BQ9H9H4 285 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 AKT3Q9Y243 479 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 CAPN9O14815 690 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 RPN1P04843 607 aaKnown RBP14.21□□□□□ -0.13
PTPRK-207ENST00000368226 USP17L2Q6R6M4 530 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 NSMCE1Q8WV22 266 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 FAM193BQ96PV7 902 aaPredicted RBP14.21□□□□□ -0.13
PTPRK-207ENST00000368226 FTOQ9C0B1 505 aaKnown RBP eCLIP14.21□□□□□ -0.13
PTPRK-207ENST00000368226 KIAA1468Q9P260 1216 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 ANAPC4Q9UJX5 808 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 PALM3A6NDB9 673 aaPredicted RBP14.21□□□□□ -0.13
PTPRK-207ENST00000368226 TNNC2P02585 160 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 INTS8Q75QN2 995 aaKnown RBP14.21□□□□□ -0.13
PTPRK-207ENST00000368226 TBC1D31Q96DN5 1066 aa14.21□□□□□ -0.13
PTPRK-207ENST00000368226 USP17L3A6NCW0 530 aa14.21□□□□□ -0.14
PTPRK-207ENST00000368226 USP17L4A6NCW7 530 aa14.21□□□□□ -0.14
PTPRK-207ENST00000368226 P4HA1P13674 534 aa14.21□□□□□ -0.14
PTPRK-207ENST00000368226 GUCY2FP51841 1108 aa14.21□□□□□ -0.14
PTPRK-207ENST00000368226 BIRC2Q13490 618 aa14.21□□□□□ -0.14
PTPRK-207ENST00000368226 KCTD2Q14681 263 aa14.21□□□□□ -0.14
PTPRK-207ENST00000368226 LRCH2Q5VUJ6 765 aa14.21□□□□□ -0.14
PTPRK-207ENST00000368226 USP17L1Q7RTZ2 530 aa14.21□□□□□ -0.14
PTPRK-207ENST00000368226 GRAMD1CQ8IYS0 662 aa14.21□□□□□ -0.14
PTPRK-207ENST00000368226 ZNF577Q9BSK1 485 aa14.21□□□□□ -0.14
PTPRK-207ENST00000368226 CDC25AP30304 524 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 UBE2SQ16763 222 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 KAZNQ674X7 775 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 ZNF772Q68DY9 489 aaPredicted RBP14.2□□□□□ -0.14
PTPRK-207ENST00000368226 IGSF1Q8N6C5 1336 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 EBAG9O00559 213 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 C21orf2O43822 256 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 ATF7P17544 494 aaPredicted RBP14.2□□□□□ -0.14
PTPRK-207ENST00000368226 KMT5BQ4FZB7 885 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 POMGNT1Q8WZA1 660 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 KIF24Q5T7B8 1368 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 IVLP07476 585 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 CYP21A2P08686 494 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 ALDH3A1P30838 453 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 USP6P35125 1406 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 PIK3CAP42336 1068 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 ADAM9Q13443 819 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 UBE3CQ15386 1083 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 HLFQ16534 295 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 HACE1Q8IYU2 909 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 COPRSQ9NQ92 184 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 LEMD3Q9Y2U8 911 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 RABGAP1Q9Y3P9 1069 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 ZMYM1Q5SVZ6 1142 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 FANCLQ9NW38 375 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 SNAP23O00161 211 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 TTLL1O95922 423 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 STAT1P42224 750 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 IFT20Q8IY31 132 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 TIGD1Q96MW7 591 aa14.2□□□□□ -0.14
PTPRK-207ENST00000368226 STAM2O75886 525 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 TMEM191BP0C7N4 346 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 ADPGKQ9BRR6 497 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 PCIF1Q9H4Z3 704 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 ERBB3P21860 1342 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 KDM6BO15054 1643 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 ERVK-7P63135 1459 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 KCNK3O14649 394 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 ODR4Q5SWX8 454 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 C4orf50Q6ZRC1 276 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 C1orf112Q9NSG2 853 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 KRBA2Q6ZNG9 492 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 ARMCX3Q9UH62 379 aaPredicted RBP14.19□□□□□ -0.14
PTPRK-207ENST00000368226 AFG3L2Q9Y4W6 797 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 ERO1AQ96HE7 468 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 SEMA3EO15041 775 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 CIAO1O76071 339 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 KRT15P19012 456 aa14.19□□□□□ -0.14
PTPRK-207ENST00000368226 HOXA13P31271 388 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms