RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 AGBL1Q96MI9 1066 aa12.46□□□□□ -0.41
SNX6-201ENST00000362031 RANBP17Q9H2T7 1088 aaKnown RBP12.46□□□□□ -0.41
SNX6-201ENST00000362031 SLC38A10Q9HBR0 1119 aa12.46□□□□□ -0.41
SNX6-201ENST00000362031 TXNRD2Q9NNW7 524 aa12.46□□□□□ -0.41
SNX6-201ENST00000362031 VPS54Q9P1Q0 977 aa12.46□□□□□ -0.41
SNX6-201ENST00000362031 COL11A1P12107 1806 aaPredicted RBP12.46□□□□□ -0.42
SNX6-201ENST00000362031 STK36Q9NRP7 1315 aa12.46□□□□□ -0.42
SNX6-201ENST00000362031 ZBTB5O15062 677 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 CDKL5O76039 1030 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 VEGFBP49765 207 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 CCDC102AQ96A19 550 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 ALG1Q9BT22 464 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 BTBD7Q9P203 1132 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 KCNJ14Q9UNX9 436 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 ZDHHC9Q9Y397 364 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 HTTP42858 3142 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 PNMA6FA0A0J9YX94 578 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 CNMDO75829 334 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 DEXIO95424 95 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 SCG2P13521 617 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 SYT1P21579 422 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 TMEM132BQ14DG7 1078 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 NPY5RQ15761 445 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 CPLX2Q6PUV4 134 aaKnown RBP12.45□□□□□ -0.42
SNX6-201ENST00000362031 FAM160B2Q86V87 743 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 TRIM22Q8IYM9 498 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 RRP36Q96EU6 259 aaKnown RBP12.45□□□□□ -0.42
SNX6-201ENST00000362031 RAVER2Q9HCJ3 691 aaKnown RBP12.45□□□□□ -0.42
SNX6-201ENST00000362031 RIPK3Q9Y572 518 aa12.45□□□□□ -0.42
SNX6-201ENST00000362031 STXBP3O00186 592 aa12.44□□□□□ -0.42
SNX6-201ENST00000362031 OPLAHO14841 1288 aa12.44□□□□□ -0.42
SNX6-201ENST00000362031 HERVK_113P62684 666 aa12.44□□□□□ -0.42
SNX6-201ENST00000362031 Q3C1V9 767 aa12.44□□□□□ -0.42
SNX6-201ENST00000362031 USH1GQ495M9 461 aa12.44□□□□□ -0.42
SNX6-201ENST00000362031 HEATR3Q7Z4Q2 680 aa12.44□□□□□ -0.42
SNX6-201ENST00000362031 ANKRD23Q86SG2 305 aa12.44□□□□□ -0.42
SNX6-201ENST00000362031 CPXCR1Q8N123 301 aa12.44□□□□□ -0.42
SNX6-201ENST00000362031 RBPJLQ9UBG7 517 aa12.44□□□□□ -0.42
SNX6-201ENST00000362031 ZNF214Q9UL59 606 aaPredicted RBP12.44□□□□□ -0.42
SNX6-201ENST00000362031 C1QTNF8P60827 252 aa12.44□□□□□ -0.42
SNX6-201ENST00000362031 IRX3P78415 501 aaPredicted RBP12.44□□□□□ -0.42
SNX6-201ENST00000362031 HMGN5P82970 282 aaKnown RBP12.44□□□□□ -0.42
SNX6-201ENST00000362031 FOXD4L5Q5VV16 416 aaPredicted RBP12.44□□□□□ -0.42
SNX6-201ENST00000362031 IFNL1Q8IU54 200 aa12.44□□□□□ -0.42
SNX6-201ENST00000362031 FOXD4L4Q8WXT5 416 aaPredicted RBP12.44□□□□□ -0.42
SNX6-201ENST00000362031 TBC1D5Q92609 795 aa12.44□□□□□ -0.42
SNX6-201ENST00000362031 MANSC4A6NHS7 340 aaPredicted RBP12.43□□□□□ -0.42
SNX6-201ENST00000362031 NOM1Q5C9Z4 860 aaKnown RBP12.43□□□□□ -0.42
SNX6-201ENST00000362031 LARP1BQ659C4 914 aaKnown RBP12.43□□□□□ -0.42
SNX6-201ENST00000362031 LBX2Q6XYB7 198 aa12.43□□□□□ -0.42
SNX6-201ENST00000362031 FAM184AQ8NB25 1140 aa12.43□□□□□ -0.42
SNX6-201ENST00000362031 OXER1Q8TDS5 423 aa12.43□□□□□ -0.42
SNX6-201ENST00000362031 CHAMP1Q96JM3 812 aa12.43□□□□□ -0.42
SNX6-201ENST00000362031 BARHL2Q9NY43 387 aa12.43□□□□□ -0.42
SNX6-201ENST00000362031 HOXC10Q9NYD6 342 aa12.43□□□□□ -0.42
SNX6-201ENST00000362031 PCDHA1Q9Y5I3 950 aa12.43□□□□□ -0.42
SNX6-201ENST00000362031 WDR33Q9C0J8 1336 aaKnown RBP12.43□□□□□ -0.42
SNX6-201ENST00000362031 TM4SF4P48230 202 aa12.42□□□□□ -0.42
SNX6-201ENST00000362031 AKAP17AQ02040 695 aaKnown RBP12.42□□□□□ -0.42
SNX6-201ENST00000362031 KRT40Q6A162 431 aa12.42□□□□□ -0.42
SNX6-201ENST00000362031 FBXO18Q8NFZ0 1043 aa12.42□□□□□ -0.42
SNX6-201ENST00000362031 UBE2Q2Q8WVN8 375 aa12.42□□□□□ -0.42
SNX6-201ENST00000362031 SEC63Q9UGP8 760 aaKnown RBP12.42□□□□□ -0.42
SNX6-201ENST00000362031 MTMR6Q9Y217 621 aa12.42□□□□□ -0.42
SNX6-201ENST00000362031 A0A0G2JMZ2 1700 aa12.42□□□□□ -0.42
SNX6-201ENST00000362031 KIF28PB7ZC32 967 aa12.42□□□□□ -0.42
SNX6-201ENST00000362031 ICAM1P05362 532 aa12.42□□□□□ -0.42
SNX6-201ENST00000362031 MUM1L1Q5H9M0 696 aa12.42□□□□□ -0.42
SNX6-201ENST00000362031 FBXO11Q86XK2 927 aa12.42□□□□□ -0.42
SNX6-201ENST00000362031 C8orf76Q96K31 380 aa12.42□□□□□ -0.42
SNX6-201ENST00000362031 PAGR1Q9BTK6 254 aa12.42□□□□□ -0.42
SNX6-201ENST00000362031 HOMER2Q9NSB8 354 aa12.42□□□□□ -0.42
SNX6-201ENST00000362031 BRCA2P51587 3418 aa12.41□□□□□ -0.42
SNX6-201ENST00000362031 NOGQ13253 232 aa12.41□□□□□ -0.42
SNX6-201ENST00000362031 EARS2Q5JPH6 523 aaKnown RBP12.41□□□□□ -0.42
SNX6-201ENST00000362031 ANKRD13CQ8N6S4 541 aa12.41□□□□□ -0.42
SNX6-201ENST00000362031 CLEC4DQ8WXI8 215 aa12.41□□□□□ -0.42
SNX6-201ENST00000362031 PHF20Q9BVI0 1012 aa12.41□□□□□ -0.42
SNX6-201ENST00000362031 AMNQ9BXJ7 453 aa12.41□□□□□ -0.42
SNX6-201ENST00000362031 SLC45A1Q9Y2W3 748 aa12.41□□□□□ -0.42
SNX6-201ENST00000362031 NFIBO00712 420 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 STX6O43752 255 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 ZBED4O75132 1171 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 HSPA6P17066 643 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 OSBPP22059 807 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 NAPAP54920 295 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 NR5A1Q13285 461 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 PLS1Q14651 629 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 SNRNP48Q6IEG0 339 aaKnown RBP12.4□□□□□ -0.42
SNX6-201ENST00000362031 FERMT3Q86UX7 667 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 RASGRP4Q8TDF6 673 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 CWC22Q9HCG8 908 aaKnown RBP12.4□□□□□ -0.42
SNX6-201ENST00000362031 CCPG1Q9ULG6 757 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 MYPNQ86TC9 1320 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 ADGRA2Q96PE1 1338 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.42
SNX6-201ENST00000362031 FAM205CA6NFA0 338 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 BTBD18B2RXH4 712 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 ECM2O94769 699 aaPredicted RBP12.4□□□□□ -0.42
SNX6-201ENST00000362031 ALAS1P13196 640 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms