RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 NAP1L2Q9ULW6 460 aaPredicted RBP16.05■□□□□ 0.16
NSMCE1-201ENST00000361439 ZNF536O15090 1300 aa16.04■□□□□ 0.16
NSMCE1-201ENST00000361439 PNMA6FA0A0J9YX94 578 aa16.04■□□□□ 0.16
NSMCE1-201ENST00000361439 RXRAP19793 462 aa16.04■□□□□ 0.16
NSMCE1-201ENST00000361439 Q3C1V9 767 aa16.04■□□□□ 0.16
NSMCE1-201ENST00000361439 CPLX2Q6PUV4 134 aaKnown RBP16.04■□□□□ 0.16
NSMCE1-201ENST00000361439 CCAR1Q8IX12 1150 aaKnown RBP16.04■□□□□ 0.16
NSMCE1-201ENST00000361439 SRBD1Q8N5C6 995 aaKnown RBP16.04■□□□□ 0.16
NSMCE1-201ENST00000361439 CHST13Q8NET6 341 aa16.04■□□□□ 0.16
NSMCE1-201ENST00000361439 ZNF296Q8WUU4 475 aaPredicted RBP16.04■□□□□ 0.16
NSMCE1-201ENST00000361439 RRP36Q96EU6 259 aaKnown RBP16.04■□□□□ 0.16
NSMCE1-201ENST00000361439 FBXO40Q9UH90 709 aa16.04■□□□□ 0.16
NSMCE1-201ENST00000361439 FOXN1O15353 648 aa16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 CYTH3O43739 400 aa16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 STRNO43815 780 aa16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 CDKL5O76039 1030 aa16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 HSPA8P11142 646 aaKnown RBP16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 IFNAR1P17181 557 aa16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 CDC27P30260 824 aa16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 FCGRTP55899 365 aa16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 FUT2Q10981 343 aa16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 CDC37Q16543 378 aaPredicted RBP16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 SNRNP48Q6IEG0 339 aaKnown RBP16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 SAMD1Q6SPF0 538 aaPredicted RBP16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 NBPF11Q86T75 865 aa16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 CCDC144CPQ8IYA2 1237 aa16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 MOV10L1Q9BXT6 1211 aaKnown RBP16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 SEC63Q9UGP8 760 aaKnown RBP16.03■□□□□ 0.16
NSMCE1-201ENST00000361439 hCG_1984214I3L0E3 225 aa16.02■□□□□ 0.16
NSMCE1-201ENST00000361439 CPLX1O14810 134 aa16.02■□□□□ 0.16
NSMCE1-201ENST00000361439 PLEKHA8P1O95397 391 aa16.02■□□□□ 0.16
NSMCE1-201ENST00000361439 ADD1P35611 737 aaKnown RBP16.02■□□□□ 0.16
NSMCE1-201ENST00000361439 PLS1Q14651 629 aa16.02■□□□□ 0.16
NSMCE1-201ENST00000361439 NTRK3Q16288 839 aa16.02■□□□□ 0.16
NSMCE1-201ENST00000361439 ME3Q16798 604 aa16.02■□□□□ 0.16
NSMCE1-201ENST00000361439 TEX2Q8IWB9 1127 aa16.02■□□□□ 0.16
NSMCE1-201ENST00000361439 ABRAQ8N0Z2 381 aa16.02■□□□□ 0.16
NSMCE1-201ENST00000361439 ZNF713Q8N859 430 aaPredicted RBP16.02■□□□□ 0.16
NSMCE1-201ENST00000361439 AMNQ9BXJ7 453 aa16.02■□□□□ 0.16
NSMCE1-201ENST00000361439 RAVER2Q9HCJ3 691 aaKnown RBP16.02■□□□□ 0.16
NSMCE1-201ENST00000361439 ERCC3P19447 782 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 HOXD10P28358 340 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 SCRN1Q12765 414 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 SLC35G1Q2M3R5 365 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 QRICH1Q2TAL8 776 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 FBXO11Q86XK2 927 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 RAB11FIP4Q86YS3 637 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 CPXCR1Q8N123 301 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 SAMD3Q8N6K7 520 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 GTF3C6Q969F1 213 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 COA7Q96BR5 231 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 RNF26Q9BY78 433 aaPredicted RBP16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 CPVLQ9H3G5 476 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 VAT1LQ9HCJ6 419 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 PRDM10Q9NQV6 1147 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 CCPG1Q9ULG6 757 aa16.01■□□□□ 0.15
NSMCE1-201ENST00000361439 ABCB11O95342 1321 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 CNTNAP5Q8WYK1 1306 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 PRPF3O43395 683 aaKnown RBP16■□□□□ 0.15
NSMCE1-201ENST00000361439 PSMC4P43686 418 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 PRMT2P55345 433 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 CCT2P78371 535 aaKnown RBP16■□□□□ 0.15
NSMCE1-201ENST00000361439 CCDC174Q6PII3 467 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 GPR142Q7Z601 462 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 PLEKHH3Q7Z736 793 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 NCAPG2Q86XI2 1143 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 TRIM22Q8IYM9 498 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 FAM177A1Q8N128 213 aaPredicted RBP16■□□□□ 0.15
NSMCE1-201ENST00000361439 RGS22Q8NE09 1264 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 AGBL1Q96MI9 1066 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 PIGSQ96S52 555 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 LARP6Q9BRS8 491 aaKnown RBP16■□□□□ 0.15
NSMCE1-201ENST00000361439 PORCNQ9H237 461 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 ACAD9Q9H845 621 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 TSKSQ9UJT2 592 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 MRPL11Q9Y3B7 192 aaKnown RBP16■□□□□ 0.15
NSMCE1-201ENST00000361439 IVNS1ABPQ9Y6Y0 642 aa16■□□□□ 0.15
NSMCE1-201ENST00000361439 SLC15A5A6NIM6 579 aa15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 TNPO2O14787 897 aaKnown RBP15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 FMNL1O95466 1100 aaPredicted RBP15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 LBX1P52954 281 aa15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 AKAP17AQ02040 695 aaKnown RBP15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 STK3Q13188 491 aa15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 MCF2L2Q86YR7 1114 aa15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 SOCS4Q8WXH5 440 aa15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 SNX21Q969T3 373 aa15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 TRERF1Q96PN7 1200 aa15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 LLPHQ9BRT6 129 aaKnown RBP15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 NCOA5Q9HCD5 579 aaKnown RBP15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 CWC22Q9HCG8 908 aaKnown RBP15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 MAP3K20Q9NYL2 800 aaKnown RBP15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 PCDHA1Q9Y5I3 950 aa15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 V9GY48 417 aaPredicted RBP15.99■□□□□ 0.15
NSMCE1-201ENST00000361439 FCER1AP12319 257 aa15.98■□□□□ 0.15
NSMCE1-201ENST00000361439 SSRP1Q08945 709 aaKnown RBP15.98■□□□□ 0.15
NSMCE1-201ENST00000361439 GRB14Q14449 540 aa15.98■□□□□ 0.15
NSMCE1-201ENST00000361439 HOMER1Q86YM7 354 aa15.98■□□□□ 0.15
NSMCE1-201ENST00000361439 CMTR1Q8N1G2 835 aaKnown RBP15.98■□□□□ 0.15
NSMCE1-201ENST00000361439 CCDC82Q8N4S0 544 aa15.98■□□□□ 0.15
NSMCE1-201ENST00000361439 CD99L2Q8TCZ2 262 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms