RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 MYOCDQ8IZQ8 938 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 POMGNT1Q8WZA1 660 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 LUC7L3O95232 432 aaKnown RBP10.58□□□□□ -0.72
CUX1-203ENST00000360264 KRT71Q3SY84 523 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 SOS2Q07890 1332 aaPredicted RBP10.58□□□□□ -0.72
CUX1-203ENST00000360264 KLHL7Q8IXQ5 586 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 LCMT1Q9UIC8 334 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 GPBP1Q86WP2 473 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 USP40Q9NVE5 1235 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 POLKQ9UBT6 870 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 APBA1Q02410 837 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 TCP10Q12799 353 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 PDCD2Q16342 344 aaPredicted RBP10.58□□□□□ -0.72
CUX1-203ENST00000360264 KRBA2Q6ZNG9 492 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 TEX12Q9BXU0 123 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 ADCY8P40145 1251 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 CTSWP56202 376 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 SYCP2Q9BX26 1530 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 GOLGA8KD6RF30 607 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 TTI1O43156 1089 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 NT5C2P49902 561 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 GTF3C6Q969F1 213 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 ST7Q9NRC1 585 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 PASKQ96RG2 1323 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 ZBTB17Q13105 803 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 EAPPQ56P03 285 aaPredicted RBP10.57□□□□□ -0.72
CUX1-203ENST00000360264 WDR17Q8IZU2 1322 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 KRIT1O00522 736 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 IQCB1Q15051 598 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 PNMA8AQ86V59 439 aaPredicted RBP10.57□□□□□ -0.72
CUX1-203ENST00000360264 PIK3CAP42336 1068 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 RAD51AP2Q09MP3 1159 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 HDAC11Q96DB2 347 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 PPP1R12CQ9BZL4 782 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 ABL1P00519 1130 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 CDHR1Q96JP9 859 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 COL4A3BPQ9Y5P4 624 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 SHANK2Q9UPX8 1470 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 TRAPPC10P48553 1259 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 CLNS1AP54105 237 aaKnown RBP10.57□□□□□ -0.72
CUX1-203ENST00000360264 ANO3Q9BYT9 981 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 KCTD2Q14681 263 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 KLC3Q6P597 504 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 HOMER3Q9NSC5 361 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 ITKQ08881 620 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 SPZ1Q9BXG8 430 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 MYO1AQ9UBC5 1043 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 TMED8Q6PL24 325 aaPredicted RBP10.57□□□□□ -0.72
CUX1-203ENST00000360264 C4orf50Q6ZRC1 276 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 MAEAQ7L5Y9 396 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 PCDHA12Q9UN75 941 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 GCP02774 474 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 ASPRV1Q53RT3 343 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 ADALQ6DHV7 355 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 NDUFAF2Q8N183 169 aa10.57□□□□□ -0.72
CUX1-203ENST00000360264 STX1BP61266 288 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 TM6SF1Q9BZW5 370 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 DDX25Q9UHL0 483 aaKnown RBP10.56□□□□□ -0.72
CUX1-203ENST00000360264 GAP43P17677 238 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 ODR4Q5SWX8 454 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 MAP3K7O43318 606 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 PYGLP06737 847 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 USP14P54578 494 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 UHRF1BP1Q6BDS2 1440 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 CTNNA1P35221 906 aaKnown RBP10.56□□□□□ -0.72
CUX1-203ENST00000360264 C10orf76Q5T2E6 689 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 CABS1Q96KC9 395 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 MED7O43513 233 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 CNKSR1Q969H4 720 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 DDX39AO00148 427 aaKnown RBP10.56□□□□□ -0.72
CUX1-203ENST00000360264 EIF3DO15371 548 aaKnown RBP eCLIP10.56□□□□□ -0.72
CUX1-203ENST00000360264 GPC4O75487 556 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 TCP1P17987 556 aaKnown RBP10.56□□□□□ -0.72
CUX1-203ENST00000360264 ZSCAN10Q96SZ4 725 aaPredicted RBP10.56□□□□□ -0.72
CUX1-203ENST00000360264 FAM207AQ9NSI2 230 aaPredicted RBP10.56□□□□□ -0.72
CUX1-203ENST00000360264 NPC1L1Q9UHC9 1359 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 GCKRQ14397 625 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 MIS18BP1Q6P0N0 1132 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 OR8K1Q8NGG5 319 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 TRIM31Q9BZY9 425 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 MAPK8IP1Q9UQF2 711 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 MAST1Q9Y2H9 1570 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 ZNF532Q9HCE3 1301 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 SMCO2A6NFE2 343 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 IFNB1P01574 187 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 TMTC4Q5T4D3 741 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 EYA1Q99502 592 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 CCDC17Q96LX7 622 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 MID2Q9UJV3 735 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 RYBPQ8N488 228 aaPredicted RBP10.56□□□□□ -0.72
CUX1-203ENST00000360264 SEPT10Q9P0V9 454 aa10.56□□□□□ -0.72
CUX1-203ENST00000360264 TXNDC9O14530 226 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 SEMA3EO15041 775 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 TIMM10P62072 90 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 FAM89AQ96GI7 184 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 PANK4Q9NVE7 773 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 PPARGP37231 505 aaPredicted RBP10.55□□□□□ -0.72
CUX1-203ENST00000360264 MAGEA1P43355 309 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 SEPT2Q15019 361 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 CERKLQ49MI3 558 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms