RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 PNMA2Q9UL42 364 aa22.29■■□□□ 1.16
HLA-DRB1-201ENST00000360004 A0A0G2JMZ2 1700 aa22.28■■□□□ 1.16
HLA-DRB1-201ENST00000360004 PALM3A6NDB9 673 aaPredicted RBP22.28■■□□□ 1.16
HLA-DRB1-201ENST00000360004 PRKCZQ05513 592 aa22.28■■□□□ 1.16
HLA-DRB1-201ENST00000360004 KCTD2Q14681 263 aa22.28■■□□□ 1.16
HLA-DRB1-201ENST00000360004 CDC37Q16543 378 aaPredicted RBP22.28■■□□□ 1.16
HLA-DRB1-201ENST00000360004 FBXO46Q6PJ61 603 aaPredicted RBP22.28■■□□□ 1.16
HLA-DRB1-201ENST00000360004 REPS2Q8NFH8 660 aa22.28■■□□□ 1.16
HLA-DRB1-201ENST00000360004 LZTS2Q9BRK4 669 aa22.28■■□□□ 1.16
HLA-DRB1-201ENST00000360004 RANBP17Q9H2T7 1088 aaKnown RBP22.28■■□□□ 1.16
HLA-DRB1-201ENST00000360004 FBXO40Q9UH90 709 aa22.28■■□□□ 1.16
HLA-DRB1-201ENST00000360004 RLFQ13129 1914 aa22.27■■□□□ 1.16
HLA-DRB1-201ENST00000360004 PARP14Q460N5 1801 aa22.27■■□□□ 1.16
HLA-DRB1-201ENST00000360004 ATP2A1O14983 1001 aa22.27■■□□□ 1.16
HLA-DRB1-201ENST00000360004 FCER1AP12319 257 aa22.27■■□□□ 1.16
HLA-DRB1-201ENST00000360004 RTN1Q16799 776 aa22.27■■□□□ 1.16
HLA-DRB1-201ENST00000360004 HOMER1Q86YM7 354 aa22.27■■□□□ 1.16
HLA-DRB1-201ENST00000360004 TNS4Q8IZW8 715 aa22.27■■□□□ 1.16
HLA-DRB1-201ENST00000360004 FANCBQ8NB91 859 aa22.27■■□□□ 1.16
HLA-DRB1-201ENST00000360004 AGBL1Q96MI9 1066 aa22.27■■□□□ 1.16
HLA-DRB1-201ENST00000360004 MMP19Q99542 508 aa22.27■■□□□ 1.16
HLA-DRB1-201ENST00000360004 MCOLN1Q9GZU1 580 aa22.27■■□□□ 1.16
HLA-DRB1-201ENST00000360004 RBM28Q9NW13 759 aaKnown RBP22.27■■□□□ 1.16
HLA-DRB1-201ENST00000360004 PTPN22Q9Y2R2 807 aa22.27■■□□□ 1.16
HLA-DRB1-201ENST00000360004 SLC15A5A6NIM6 579 aa22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 STRNO43815 780 aa22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 ICAM1P05362 532 aa22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 FLT3LGP49771 235 aa22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 METAP2P50579 478 aaKnown RBP eCLIP22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 TKFCQ3LXA3 575 aa22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 DPP9Q86TI2 863 aa22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 PIBF1Q8WXW3 757 aa22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 RNF146Q9NTX7 359 aa22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 SLC5A4Q9NY91 659 aa22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 BIN2Q9UBW5 565 aaPredicted RBP22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 SEC63Q9UGP8 760 aaKnown RBP22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 BRPF3Q9ULD4 1205 aa22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 GABRQQ9UN88 632 aa22.26■■□□□ 1.15
HLA-DRB1-201ENST00000360004 ZSWIM8A7E2V4 1837 aa22.25■■□□□ 1.15
HLA-DRB1-201ENST00000360004 CYP2B6P20813 491 aa22.25■■□□□ 1.15
HLA-DRB1-201ENST00000360004 PTPREP23469 700 aa22.25■■□□□ 1.15
HLA-DRB1-201ENST00000360004 RGS2P41220 211 aa22.25■■□□□ 1.15
HLA-DRB1-201ENST00000360004 NEK4P51957 841 aa22.25■■□□□ 1.15
HLA-DRB1-201ENST00000360004 CAP1Q01518 475 aa22.25■■□□□ 1.15
HLA-DRB1-201ENST00000360004 ANKRD1Q15327 319 aa22.25■■□□□ 1.15
HLA-DRB1-201ENST00000360004 USH1GQ495M9 461 aa22.25■■□□□ 1.15
HLA-DRB1-201ENST00000360004 CHST13Q8NET6 341 aa22.25■■□□□ 1.15
HLA-DRB1-201ENST00000360004 DDX11Q96FC9 970 aa22.25■■□□□ 1.15
HLA-DRB1-201ENST00000360004 TRERF1Q96PN7 1200 aa22.25■■□□□ 1.15
HLA-DRB1-201ENST00000360004 ACAD9Q9H845 621 aa22.25■■□□□ 1.15
HLA-DRB1-201ENST00000360004 PTCH2Q9Y6C5 1203 aa22.25■■□□□ 1.15
HLA-DRB1-201ENST00000360004 COL11A1P12107 1806 aaPredicted RBP22.24■■□□□ 1.15
HLA-DRB1-201ENST00000360004 CCDC196A0A1B0GTZ2 297 aa22.24■■□□□ 1.15
HLA-DRB1-201ENST00000360004 TRAF1Q13077 416 aa22.24■■□□□ 1.15
HLA-DRB1-201ENST00000360004 FBXO11Q86XK2 927 aa22.24■■□□□ 1.15
HLA-DRB1-201ENST00000360004 ANKRD35Q8N283 1001 aa22.24■■□□□ 1.15
HLA-DRB1-201ENST00000360004 CCDC82Q8N4S0 544 aa22.24■■□□□ 1.15
HLA-DRB1-201ENST00000360004 RRP36Q96EU6 259 aaKnown RBP22.24■■□□□ 1.15
HLA-DRB1-201ENST00000360004 JMJD4Q9H9V9 463 aa22.24■■□□□ 1.15
HLA-DRB1-201ENST00000360004 RIPK3Q9Y572 518 aa22.24■■□□□ 1.15
HLA-DRB1-201ENST00000360004 MGAMO43451 1857 aa22.24■■□□□ 1.15
HLA-DRB1-201ENST00000360004 PLEKHA8P1O95397 391 aa22.23■■□□□ 1.15
HLA-DRB1-201ENST00000360004 ADORA2AP29274 412 aa22.23■■□□□ 1.15
HLA-DRB1-201ENST00000360004 RCAN1P53805 252 aa22.23■■□□□ 1.15
HLA-DRB1-201ENST00000360004 MAP2K5Q13163 448 aa22.23■■□□□ 1.15
HLA-DRB1-201ENST00000360004 QRICH1Q2TAL8 776 aa22.23■■□□□ 1.15
HLA-DRB1-201ENST00000360004 SLC9C1Q4G0N8 1177 aa22.23■■□□□ 1.15
HLA-DRB1-201ENST00000360004 NOL8Q76FK4 1167 aaKnown RBP22.23■■□□□ 1.15
HLA-DRB1-201ENST00000360004 BACH2Q9BYV9 841 aa22.23■■□□□ 1.15
HLA-DRB1-201ENST00000360004 ZNF536O15090 1300 aa22.23■■□□□ 1.15
HLA-DRB1-201ENST00000360004 ZBTB5O15062 677 aa22.22■■□□□ 1.15
HLA-DRB1-201ENST00000360004 ADCY3O60266 1144 aa22.22■■□□□ 1.15
HLA-DRB1-201ENST00000360004 TOB2Q14106 344 aaPredicted RBP22.22■■□□□ 1.15
HLA-DRB1-201ENST00000360004 PPP2R5BQ15173 497 aa22.22■■□□□ 1.15
HLA-DRB1-201ENST00000360004 NSMFQ6X4W1 530 aa22.22■■□□□ 1.15
HLA-DRB1-201ENST00000360004 CMTR1Q8N1G2 835 aaKnown RBP22.22■■□□□ 1.15
HLA-DRB1-201ENST00000360004 FBXL16Q8N461 479 aa22.22■■□□□ 1.15
HLA-DRB1-201ENST00000360004 PIGSQ96S52 555 aa22.22■■□□□ 1.15
HLA-DRB1-201ENST00000360004 LARP6Q9BRS8 491 aaKnown RBP22.22■■□□□ 1.15
HLA-DRB1-201ENST00000360004 AMNQ9BXJ7 453 aa22.22■■□□□ 1.15
HLA-DRB1-201ENST00000360004 RBM25P49756 843 aaKnown RBP22.21■■□□□ 1.15
HLA-DRB1-201ENST00000360004 STK3Q13188 491 aa22.21■■□□□ 1.15
HLA-DRB1-201ENST00000360004 GRB14Q14449 540 aa22.21■■□□□ 1.15
HLA-DRB1-201ENST00000360004 MORN1Q5T089 497 aa22.21■■□□□ 1.15
HLA-DRB1-201ENST00000360004 TMTC3Q6ZXV5 915 aa22.21■■□□□ 1.15
HLA-DRB1-201ENST00000360004 NBPF11Q86T75 865 aa22.21■■□□□ 1.15
HLA-DRB1-201ENST00000360004 ABRAQ8N0Z2 381 aa22.21■■□□□ 1.15
HLA-DRB1-201ENST00000360004 SLAIN1Q8ND83 568 aa22.21■■□□□ 1.15
HLA-DRB1-201ENST00000360004 APBA2Q99767 749 aa22.21■■□□□ 1.15
HLA-DRB1-201ENST00000360004 SPZ1Q9BXG8 430 aa22.21■■□□□ 1.15
HLA-DRB1-201ENST00000360004 AGXT2Q9BYV1 514 aa22.21■■□□□ 1.15
HLA-DRB1-201ENST00000360004 RIOX1Q9H6W3 641 aa22.21■■□□□ 1.15
HLA-DRB1-201ENST00000360004 ABCB11O95342 1321 aa22.21■■□□□ 1.15
HLA-DRB1-201ENST00000360004 CPLX1O14810 134 aa22.2■■□□□ 1.14
HLA-DRB1-201ENST00000360004 TAL1P17542 331 aaPredicted RBP22.2■■□□□ 1.14
HLA-DRB1-201ENST00000360004 SMARCA1P28370 1054 aa22.2■■□□□ 1.14
HLA-DRB1-201ENST00000360004 GRK4P32298 578 aa22.2■■□□□ 1.14
HLA-DRB1-201ENST00000360004 AK2P54819 239 aa22.2■■□□□ 1.14
HLA-DRB1-201ENST00000360004 CCT2P78371 535 aaKnown RBP22.2■■□□□ 1.14
HLA-DRB1-201ENST00000360004 IRF5Q13568 498 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms