RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PTPN22Q9Y2R2 807 aa20.14■□□□□ 0.82
SHANK1-202ENST00000359082 UHRF1BP1Q6BDS2 1440 aa20.14■□□□□ 0.82
SHANK1-202ENST00000359082 IL1RL1Q01638 556 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 TTBK2Q6IQ55 1244 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 DCLK2Q8N568 766 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.14■□□□□ 0.81
SHANK1-202ENST00000359082 ABCC2Q92887 1545 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 SCNN1DP51172 638 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 RIPOR2Q9Y4F9 1068 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 ALDH1B1P30837 517 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 FAM193BQ96PV7 902 aaPredicted RBP20.14■□□□□ 0.81
SHANK1-202ENST00000359082 BEGAINQ9BUH8 593 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 ZMYM6O95789 1325 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 USP17L12C9JPN9 530 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 USP17L21D6R901 530 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 MFSD14BQ5SR56 506 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 HAUS1Q96CS2 278 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 IWS1Q96ST2 819 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 PPP2R2CQ9Y2T4 447 aa20.14■□□□□ 0.81
SHANK1-202ENST00000359082 PDE6BP35913 854 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 ZNF827Q17R98 1081 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 ADALQ6DHV7 355 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 NOSTRINQ8IVI9 506 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 TEKT3Q9BXF9 490 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 CSADQ9Y600 493 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 FAM71BQ8TC56 605 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 SUGCTQ9HAC7 445 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 PCDHA12Q9UN75 941 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 OR8K1Q8NGG5 319 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 HDAC11Q96DB2 347 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 VCX3AQ9NNX9 186 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 SMIM24O75264 130 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 NCAPG2Q86XI2 1143 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 KAT6BQ8WYB5 2073 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 ECE1P42892 770 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 DMP1Q13316 513 aaPredicted RBP20.13■□□□□ 0.81
SHANK1-202ENST00000359082 MAP3K21Q5TCX8 1036 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 MYSM1Q5VVJ2 828 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 BABAM1Q9NWV8 329 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 MAD1L1Q9Y6D9 718 aa20.13■□□□□ 0.81
SHANK1-202ENST00000359082 DBN1Q16643 649 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 MUM1L1Q5H9M0 696 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 CLIC6Q96NY7 704 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 SMYD2Q9NRG4 433 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 N4BP1O75113 896 aaKnown RBP20.12■□□□□ 0.81
SHANK1-202ENST00000359082 ARMCX5Q6P1M9 558 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 PPM1KQ8N3J5 372 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 TBC1D22AQ8WUA7 517 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 KIAA1468Q9P260 1216 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 BZW2Q9Y6E2 419 aaKnown RBP20.12■□□□□ 0.81
SHANK1-202ENST00000359082 RPN1P04843 607 aaKnown RBP20.12■□□□□ 0.81
SHANK1-202ENST00000359082 DOK7Q18PE1 504 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 IFNL3Q8IZI9 196 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 MMEL1Q495T6 779 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 CCDC93Q567U6 631 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 SPC25Q9HBM1 224 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 MAPKBP1O60336 1514 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 ZMYM4Q5VZL5 1548 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 GYG1P46976 350 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 BFSP1Q12934 665 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 POLA2Q14181 598 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 RINT1Q6NUQ1 792 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 RFX6Q8HWS3 928 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 DDX17Q92841 729 aaKnown RBP20.12■□□□□ 0.81
SHANK1-202ENST00000359082 APOL6Q9BWW8 343 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 KCNG1Q9UIX4 513 aa20.12■□□□□ 0.81
SHANK1-202ENST00000359082 CFAP43Q8NDM7 1665 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 OR52Z1P0C646 297 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 NAA35Q5VZE5 725 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 PDZD8Q8NEN9 1154 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 NCAPGQ9BPX3 1015 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 NEURL1BA8MQ27 555 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 SERPINB6P35237 376 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 PTH1RQ03431 593 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 BRD3Q15059 726 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 POLGP54098 1239 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-202ENST00000359082 GARSP41250 739 aaKnown RBP20.11■□□□□ 0.81
SHANK1-202ENST00000359082 IRX4P78413 519 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 COG7P83436 770 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 RPGRIP1Q96KN7 1286 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 CAPS2Q9BXY5 557 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 TMEM63CQ9P1W3 806 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 ARMCX3Q9UH62 379 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-202ENST00000359082 MRPL11Q9Y3B7 192 aaKnown RBP20.11■□□□□ 0.81
SHANK1-202ENST00000359082 ESYT2A0FGR8 921 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 H7C1D1 291 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 ATP5JP18859 108 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 ZNF277Q9NRM2 450 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-202ENST00000359082 SLC5A4Q9NY91 659 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 TRIM35Q9UPQ4 493 aa20.11■□□□□ 0.81
SHANK1-202ENST00000359082 PDZD4Q76G19 769 aaPredicted RBP20.1■□□□□ 0.81
SHANK1-202ENST00000359082 CCDC127Q96BQ5 260 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 TYW1Q9NV66 732 aaKnown RBP20.1■□□□□ 0.81
SHANK1-202ENST00000359082 H7C0C1 242 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 HOXB7P09629 217 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 ATP5OP48047 213 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 FAM178BQ8IXR5 827 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 ATP10AO60312 1499 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 TMEM191BP0C7N4 346 aa20.1■□□□□ 0.81
SHANK1-202ENST00000359082 ADAM9Q13443 819 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms