RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 FERMT3Q86UX7 667 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 ALYREFQ86V81 257 aaKnown RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 CCDC83Q8IWF9 413 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 DHX40Q8IX18 779 aaKnown RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 CCDC155Q8N6L0 562 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 PI4K2BQ8TCG2 481 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 TTC14Q96N46 770 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 MYD88Q99836 296 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 PHAXQ9H814 394 aaKnown RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 VEZTQ9HBM0 779 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 MED23Q9ULK4 1368 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 AKAP11Q9UKA4 1901 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 MPHOSPH10O00566 681 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 NRDCO43847 1150 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 SURF6O75683 361 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 LARGE1O95461 756 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 ERCC3P19447 782 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 GPTP24298 496 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 HOXA7P31268 230 aaPredicted RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 CTSWP56202 376 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 PPP2R3AQ06190 1150 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 IFIT5Q13325 482 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 CCDC57Q2TAC2 916 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 BEND6Q5SZJ8 279 aaPredicted RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 SLC4A10Q6U841 1118 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 NLRP10Q86W26 655 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 LINC00528Q8N1L1 170 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 CCDC150Q8NCX0 1101 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 HNRNPLLQ8WVV9 542 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 N4BP2L2Q92802 583 aaPredicted RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 RILPL2Q969X0 211 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 CCDC102AQ96A19 550 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 SPATA32Q96LK8 384 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 CLIC6Q96NY7 704 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 SCAND2PQ9GZW5 306 aaPredicted RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 FAM204AQ9H8W3 233 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 BSDC1Q9NW68 430 aaPredicted RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 TFIP11Q9UBB9 837 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 GOLGB1Q14789 3259 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 PASKQ96RG2 1323 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 MYH14Q7Z406 1995 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 KLRG2A4D1S0 409 aaPredicted RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 ANKRD33BA6NCL7 494 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 CCP110O43303 1012 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 CAMTA2O94983 1202 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 GCFC2P16383 781 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 EIF2S2P20042 333 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 IRX1P78414 480 aaPredicted RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 PTPN12Q05209 780 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 DDR1Q08345 913 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 UBE3CQ15386 1083 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 HSP90B2PQ58FF3 399 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 TNNI3KQ59H18 835 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 LARP1BQ659C4 914 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 WWC2Q6AWC2 1192 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 INTS5Q6P9B9 1019 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 SMIM5Q71RC9 77 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 TMC6Q7Z403 805 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 DZIP3Q86Y13 1208 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 TEX11Q8IYF3 940 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 MSL3Q8N5Y2 521 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 FAM71BQ8TC56 605 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 BICD2Q8TD16 824 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 LEO1Q8WVC0 666 aaPredicted RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 LPIN2Q92539 896 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 GOLGA1Q92805 767 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 ITFG2Q969R8 447 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 DDX11Q96FC9 970 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 SUCLG2Q96I99 432 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 NUDT12Q9BQG2 462 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 LLPHQ9BRT6 129 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 MAF1Q9H063 256 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 SUGCTQ9HAC7 445 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 CEP126Q9P2H0 1117 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 MCM8Q9UJA3 840 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 L1RE1Q9UN81 338 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 FAM169AQ9Y6X4 670 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 FPGT-TNNI3KV9GXZ4 949 aa4.52□□□□□ -1.69
CNGA1-201ENST00000358519 DDX60LQ5H9U9 1706 aaKnown RBP4.52□□□□□ -1.69
CNGA1-201ENST00000358519 A0A087WWV3 80 aa4.51□□□□□ -1.69
CNGA1-201ENST00000358519 SLC5A1P13866 664 aa4.51□□□□□ -1.69
CNGA1-201ENST00000358519 ZKSCAN1P17029 563 aaPredicted RBP4.51□□□□□ -1.69
CNGA1-201ENST00000358519 NF2P35240 595 aa4.51□□□□□ -1.69
CNGA1-201ENST00000358519 TBC1D8BQ0IIM8 1120 aa4.51□□□□□ -1.69
CNGA1-201ENST00000358519 OS9Q13438 667 aaPredicted RBP4.51□□□□□ -1.69
CNGA1-201ENST00000358519 PUM3Q15397 648 aaKnown RBP4.51□□□□□ -1.69
CNGA1-201ENST00000358519 STX1AQ16623 288 aa4.51□□□□□ -1.69
CNGA1-201ENST00000358519 SPTY2D1Q68D10 685 aaPredicted RBP4.51□□□□□ -1.69
CNGA1-201ENST00000358519 CDC37L1Q7L3B6 337 aa4.51□□□□□ -1.69
CNGA1-201ENST00000358519 NBPF5PQ86XG9 351 aaPredicted RBP4.51□□□□□ -1.69
CNGA1-201ENST00000358519 FMNL3Q8IVF7 1028 aa4.51□□□□□ -1.69
CNGA1-201ENST00000358519 PRPF38AQ8NAV1 312 aaKnown RBP4.51□□□□□ -1.69
CNGA1-201ENST00000358519 PGBD1Q96JS3 809 aa4.51□□□□□ -1.69
CNGA1-201ENST00000358519 CABS1Q96KC9 395 aa4.51□□□□□ -1.69
CNGA1-201ENST00000358519 MPHOSPH8Q99549 860 aa4.51□□□□□ -1.69
CNGA1-201ENST00000358519 MRIQ9BWK5 157 aa4.51□□□□□ -1.69
CNGA1-201ENST00000358519 TRIM6Q9C030 488 aaPredicted RBP4.51□□□□□ -1.69
CNGA1-201ENST00000358519 IL25Q9H293 177 aa4.51□□□□□ -1.69
CNGA1-201ENST00000358519 ZFAND3Q9H8U3 227 aa4.51□□□□□ -1.69
CNGA1-201ENST00000358519 LEMD3Q9Y2U8 911 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms