RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ANKRD13CQ8N6S4 541 aa17.66■□□□□ 0.42
TPM1-206ENST00000358278 PIGSQ96S52 555 aa17.66■□□□□ 0.42
TPM1-206ENST00000358278 SLC26A6Q9BXS9 759 aa17.66■□□□□ 0.42
TPM1-206ENST00000358278 RNF186Q9NXI6 227 aa17.66■□□□□ 0.42
TPM1-206ENST00000358278 RABGAP1Q9Y3P9 1069 aa17.66■□□□□ 0.42
TPM1-206ENST00000358278 DOCK3Q8IZD9 2030 aa17.65■□□□□ 0.42
TPM1-206ENST00000358278 ZBTB5O15062 677 aa17.65■□□□□ 0.42
TPM1-206ENST00000358278 TLR2O60603 784 aa17.65■□□□□ 0.42
TPM1-206ENST00000358278 FUT2Q10981 343 aa17.65■□□□□ 0.42
TPM1-206ENST00000358278 ST3GAL1Q11201 340 aa17.65■□□□□ 0.42
TPM1-206ENST00000358278 CPXCR1Q8N123 301 aa17.65■□□□□ 0.42
TPM1-206ENST00000358278 ADGRA2Q96PE1 1338 aa17.65■□□□□ 0.42
TPM1-206ENST00000358278 hCG_1642624A0A1W2PR95 340 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 ANP32AP39687 249 aaKnown RBP17.64■□□□□ 0.41
TPM1-206ENST00000358278 SSRP1Q08945 709 aaKnown RBP17.64■□□□□ 0.41
TPM1-206ENST00000358278 TMEM132BQ14DG7 1078 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 QRICH1Q2TAL8 776 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 RNF26Q9BY78 433 aaPredicted RBP17.64■□□□□ 0.41
TPM1-206ENST00000358278 RAVER2Q9HCJ3 691 aaKnown RBP17.64■□□□□ 0.41
TPM1-206ENST00000358278 TXNRD2Q9NNW7 524 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 BTBD7Q9P203 1132 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 RBM27Q9P2N5 1060 aaKnown RBP17.64■□□□□ 0.41
TPM1-206ENST00000358278 CPA4Q9UI42 421 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 V9GY48 417 aaPredicted RBP17.64■□□□□ 0.41
TPM1-206ENST00000358278 PEX10O60683 326 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 TBC1D8O95759 1140 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 SLC4A3P48751 1232 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 OAZ1P54368 228 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 ERVK-9P63128 1117 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 ERVK-24P63145 666 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 BECN1Q14457 450 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 FAM110CQ1W6H9 321 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 REPS2Q8NFH8 660 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 MTMR8Q96EF0 704 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 TEX13BQ9BXU2 312 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 TSHZ2Q9NRE2 1034 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 RBPJLQ9UBG7 517 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 ZNF214Q9UL59 606 aaPredicted RBP17.64■□□□□ 0.41
TPM1-206ENST00000358278 CCPG1Q9ULG6 757 aa17.64■□□□□ 0.41
TPM1-206ENST00000358278 PNMA6FA0A0J9YX94 578 aa17.63■□□□□ 0.41
TPM1-206ENST00000358278 PTPDC1A2A3K4 754 aa17.63■□□□□ 0.41
TPM1-206ENST00000358278 FMNL1O95466 1100 aaPredicted RBP17.63■□□□□ 0.41
TPM1-206ENST00000358278 CTDNEP1O95476 244 aa17.63■□□□□ 0.41
TPM1-206ENST00000358278 ICAM1P05362 532 aa17.63■□□□□ 0.41
TPM1-206ENST00000358278 USH1GQ495M9 461 aa17.63■□□□□ 0.41
TPM1-206ENST00000358278 SNRNP48Q6IEG0 339 aaKnown RBP17.63■□□□□ 0.41
TPM1-206ENST00000358278 POTEEQ6S8J3 1075 aa17.63■□□□□ 0.41
TPM1-206ENST00000358278 FBXO11Q86XK2 927 aa17.63■□□□□ 0.41
TPM1-206ENST00000358278 NSUN7Q8NE18 718 aaKnown RBP17.63■□□□□ 0.41
TPM1-206ENST00000358278 GPRC5AQ8NFJ5 357 aa17.63■□□□□ 0.41
TPM1-206ENST00000358278 LLPHQ9BRT6 129 aaKnown RBP17.63■□□□□ 0.41
TPM1-206ENST00000358278 SPATC1LQ9H0A9 340 aa17.63■□□□□ 0.41
TPM1-206ENST00000358278 SAGE1Q9NXZ1 904 aa17.63■□□□□ 0.41
TPM1-206ENST00000358278 PRPF3O43395 683 aaKnown RBP17.62■□□□□ 0.41
TPM1-206ENST00000358278 DTNBO60941 627 aa17.62■□□□□ 0.41
TPM1-206ENST00000358278 CNMDO75829 334 aa17.62■□□□□ 0.41
TPM1-206ENST00000358278 HSP90AA1P07900 732 aaKnown RBP17.62■□□□□ 0.41
TPM1-206ENST00000358278 STAT3P40763 770 aa17.62■□□□□ 0.41
TPM1-206ENST00000358278 CCNA1P78396 465 aa17.62■□□□□ 0.41
TPM1-206ENST00000358278 AGBL1Q96MI9 1066 aa17.62■□□□□ 0.41
TPM1-206ENST00000358278 AMNQ9BXJ7 453 aa17.62■□□□□ 0.41
TPM1-206ENST00000358278 CFHR5Q9BXR6 569 aa17.62■□□□□ 0.41
TPM1-206ENST00000358278 MORF4L1Q9UBU8 362 aa17.62■□□□□ 0.41
TPM1-206ENST00000358278 PNMA2Q9UL42 364 aa17.62■□□□□ 0.41
TPM1-206ENST00000358278 ZSWIM8A7E2V4 1837 aa17.62■□□□□ 0.41
TPM1-206ENST00000358278 ZNF536O15090 1300 aa17.62■□□□□ 0.41
TPM1-206ENST00000358278 STK36Q9NRP7 1315 aa17.62■□□□□ 0.41
TPM1-206ENST00000358278 ATP2A1O14983 1001 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 JAK2O60674 1132 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 DEXIO95424 95 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 BCRP11274 1271 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 C17orf99Q6UX52 265 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 HEATR3Q7Z4Q2 680 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 CCAR1Q8IX12 1150 aaKnown RBP17.61■□□□□ 0.41
TPM1-206ENST00000358278 DDX11Q96FC9 970 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 ORC3Q9UBD5 711 aaPredicted RBP17.61■□□□□ 0.41
TPM1-206ENST00000358278 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.61■□□□□ 0.41
TPM1-206ENST00000358278 PLXNA1Q9UIW2 1896 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 ALAS1P13196 640 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 SCG2P13521 617 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 TRAF1Q13077 416 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 CUL4AQ13619 759 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 PFKFB3Q16875 520 aaPredicted RBP17.61■□□□□ 0.41
TPM1-206ENST00000358278 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 GPKOWQ92917 476 aaPredicted RBP eCLIP17.61■□□□□ 0.41
TPM1-206ENST00000358278 R3HDMLQ9H3Y0 253 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 HOMER2Q9NSB8 354 aa17.61■□□□□ 0.41
TPM1-206ENST00000358278 PPP1R11O60927 126 aaPredicted RBP17.6■□□□□ 0.41
TPM1-206ENST00000358278 TAL1P17542 331 aaPredicted RBP17.6■□□□□ 0.41
TPM1-206ENST00000358278 HMGN5P82970 282 aaKnown RBP17.6■□□□□ 0.41
TPM1-206ENST00000358278 Q3C1V9 767 aa17.6■□□□□ 0.41
TPM1-206ENST00000358278 NCAPG2Q86XI2 1143 aa17.6■□□□□ 0.41
TPM1-206ENST00000358278 MOV10L1Q9BXT6 1211 aaKnown RBP17.6■□□□□ 0.41
TPM1-206ENST00000358278 WBP1LQ9NX94 342 aa17.6■□□□□ 0.41
TPM1-206ENST00000358278 PCDHA1Q9Y5I3 950 aa17.6■□□□□ 0.41
TPM1-206ENST00000358278 SLC25A27O95847 323 aa17.59■□□□□ 0.41
TPM1-206ENST00000358278 COPB2P35606 906 aa17.59■□□□□ 0.41
TPM1-206ENST00000358278 WDR78Q5VTH9 848 aa17.59■□□□□ 0.41
TPM1-206ENST00000358278 RIOX2Q8IUF8 465 aa17.59■□□□□ 0.41
TPM1-206ENST00000358278 FAM184AQ8NB25 1140 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms