RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 TNNI2P48788 182 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 LRRC41Q15345 812 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 E2F4Q16254 413 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 CDKAL1Q5VV42 579 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 KIFC2Q96AC6 838 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 CDK5RAP3Q96JB5 506 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 PANX2Q96RD6 677 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 PLEKHA4Q9H4M7 779 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 KCND1Q9NSA2 647 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 ABHD10Q9NUJ1 306 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 AGPAT5Q9NUQ2 364 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 MAD2L2Q9UI95 211 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 USP17L5A8MUK1 530 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 NKRFO15226 690 aaKnown RBP eCLIP9.28□□□□□ -0.92
CD46-205ENST00000358170 MYO1BO43795 1136 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 OAS2P29728 719 aaKnown RBP9.28□□□□□ -0.92
CD46-205ENST00000358170 SLC16A2P36021 539 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 SCNN1DP51172 638 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 RCAN1P53805 252 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 GTF2IP78347 998 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 CCDC122Q5T0U0 273 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 FCHSD1Q86WN1 690 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 MTA3Q9BTC8 594 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 KANSL2Q9H9L4 492 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 FAM207AQ9NSI2 230 aaPredicted RBP9.28□□□□□ -0.92
CD46-205ENST00000358170 EXOC1Q9NV70 894 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 RMND1Q9NWS8 449 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 G3V3G9 751 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 RPS6KA4O75676 772 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 CDK8P49336 464 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 FAM193AP78312 1265 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 STK4Q13043 487 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 MAPK8IP2Q13387 824 aaPredicted RBP9.28□□□□□ -0.92
CD46-205ENST00000358170 UTP14CQ5TAP6 766 aaKnown RBP9.28□□□□□ -0.92
CD46-205ENST00000358170 DCAF8Q5TAQ9 597 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 CC2D1AQ6P1N0 951 aaPredicted RBP9.28□□□□□ -0.92
CD46-205ENST00000358170 ANKRD13CQ8N6S4 541 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 WDR66Q8TBY9 1149 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 CAGE1Q8TC20 777 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 TBCKQ8TEA7 893 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 CEP95Q96GE4 821 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 POLD4Q9HCU8 107 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 RWDD2AQ9UIY3 292 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 EPN1Q9Y6I3 576 aaPredicted RBP9.28□□□□□ -0.92
CD46-205ENST00000358170 MYH3P11055 1940 aa9.28□□□□□ -0.92
CD46-205ENST00000358170 IPO7O95373 1038 aaKnown RBP9.27□□□□□ -0.92
CD46-205ENST00000358170 TUBB4AP04350 444 aa9.27□□□□□ -0.92
CD46-205ENST00000358170 NAP1L1P55209 391 aaKnown RBP9.27□□□□□ -0.92
CD46-205ENST00000358170 GPSM2P81274 684 aa9.27□□□□□ -0.92
CD46-205ENST00000358170 CACNB1Q02641 598 aaPredicted RBP9.27□□□□□ -0.92
CD46-205ENST00000358170 SMC1AQ14683 1233 aaKnown RBP9.27□□□□□ -0.92
CD46-205ENST00000358170 NAALADL2Q58DX5 795 aa9.27□□□□□ -0.92
CD46-205ENST00000358170 CYP26C1Q6V0L0 522 aa9.27□□□□□ -0.92
CD46-205ENST00000358170 ZNF804AQ7Z570 1209 aa9.27□□□□□ -0.92
CD46-205ENST00000358170 RGS22Q8NE09 1264 aa9.27□□□□□ -0.92
CD46-205ENST00000358170 CCDC102AQ96A19 550 aa9.27□□□□□ -0.92
CD46-205ENST00000358170 MMRN2Q9H8L6 949 aa9.27□□□□□ -0.92
CD46-205ENST00000358170 DUSP10Q9Y6W6 482 aa9.27□□□□□ -0.92
CD46-205ENST00000358170 MYH13Q9UKX3 1938 aa9.27□□□□□ -0.92
CD46-205ENST00000358170 FAM196BA6NMK8 535 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 RASA1P20936 1047 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 LONP1P36776 959 aaKnown RBP9.27□□□□□ -0.93
CD46-205ENST00000358170 TNNT3P45378 269 aaPredicted RBP9.27□□□□□ -0.93
CD46-205ENST00000358170 ST5P78524 1137 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 GABPB1Q06547 395 aaPredicted RBP9.27□□□□□ -0.93
CD46-205ENST00000358170 CCDC96Q2M329 555 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 DGKHQ86XP1 1220 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 TMTC1Q8IUR5 882 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 GPR161Q8N6U8 529 aaKnown RBP9.27□□□□□ -0.93
CD46-205ENST00000358170 SHANK3Q9BYB0 1731 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.27□□□□□ -0.93
CD46-205ENST00000358170 CTAGE15A4D2H0 777 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 POTEMA6NI47 508 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 CTAGE8P0CG41 777 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 ARID5AQ03989 594 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 SPAG1Q07617 926 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 NONOQ15233 471 aaKnown RBP eCLIP9.27□□□□□ -0.93
CD46-205ENST00000358170 UBE2SQ16763 222 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 DOK7Q18PE1 504 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 LONRF2Q1L5Z9 754 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 KRT26Q7Z3Y9 468 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 CTAGE6Q86UF2 777 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 POTEDQ86YR6 584 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 CTAGE4Q8IX94 777 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 NOA1Q8NC60 698 aaKnown RBP9.27□□□□□ -0.93
CD46-205ENST00000358170 CCDC148Q8NFR7 591 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 OR8K1Q8NGG5 319 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 LRRC15Q8TF66 581 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 CCDC47Q96A33 483 aaKnown RBP9.27□□□□□ -0.93
CD46-205ENST00000358170 RRP36Q96EU6 259 aaKnown RBP9.27□□□□□ -0.93
CD46-205ENST00000358170 NAPGQ99747 312 aaPredicted RBP9.27□□□□□ -0.93
CD46-205ENST00000358170 TUBGCP2Q9BSJ2 902 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 NOC4LQ9BVI4 516 aaKnown RBP9.27□□□□□ -0.93
CD46-205ENST00000358170 JADE2Q9NQC1 790 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 CDC23Q9UJX2 597 aa9.27□□□□□ -0.93
CD46-205ENST00000358170 THRAP3Q9Y2W1 955 aaKnown RBP9.27□□□□□ -0.93
CD46-205ENST00000358170 SEMA3EO15041 775 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 TBC1D8O95759 1140 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 LDHCP07864 332 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 LMAN1P49257 510 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms