RNA–Protein interactions for RNA: ENST00000356994.6

SCRIB-202, Transcript of scribbled planar cell polarity protein, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SCRIB, Length 5,218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-202ENST00000356994 ARMCX3Q9UH62 379 aaPredicted RBP18.29■□□□□ 0.52
SCRIB-202ENST00000356994 BZW2Q9Y6E2 419 aaKnown RBP18.29■□□□□ 0.52
SCRIB-202ENST00000356994 KCNK3O14649 394 aa18.29■□□□□ 0.52
SCRIB-202ENST00000356994 DNAJC10Q8IXB1 793 aa18.29■□□□□ 0.52
SCRIB-202ENST00000356994 TBC1D7Q9P0N9 293 aa18.29■□□□□ 0.52
SCRIB-202ENST00000356994 ANKRD20A3Q5VUR7 823 aa18.29■□□□□ 0.52
SCRIB-202ENST00000356994 CARMIL3Q8ND23 1372 aa18.29■□□□□ 0.52
SCRIB-202ENST00000356994 LRRD1A4D1F6 860 aa18.28■□□□□ 0.52
SCRIB-202ENST00000356994 KLHL14Q9P2G3 628 aa18.28■□□□□ 0.52
SCRIB-202ENST00000356994 BTBD18B2RXH4 712 aa18.28■□□□□ 0.52
SCRIB-202ENST00000356994 NSUN7Q8NE18 718 aaKnown RBP18.28■□□□□ 0.52
SCRIB-202ENST00000356994 TYW1Q9NV66 732 aaKnown RBP18.28■□□□□ 0.52
SCRIB-202ENST00000356994 MYL1P05976 194 aa18.28■□□□□ 0.52
SCRIB-202ENST00000356994 PPP1R21Q6ZMI0 780 aa18.28■□□□□ 0.52
SCRIB-202ENST00000356994 GPBP1Q86WP2 473 aa18.28■□□□□ 0.52
SCRIB-202ENST00000356994 BBOF1Q8ND07 529 aa18.28■□□□□ 0.52
SCRIB-202ENST00000356994 HOOK2Q96ED9 719 aa18.28■□□□□ 0.52
SCRIB-202ENST00000356994 PPANQ9NQ55 473 aaKnown RBP18.28■□□□□ 0.52
SCRIB-202ENST00000356994 BTG4Q9NY30 223 aa18.28■□□□□ 0.52
SCRIB-202ENST00000356994 PKD2L1Q9P0L9 805 aa18.28■□□□□ 0.52
SCRIB-202ENST00000356994 PCDHA5Q9Y5H7 936 aa18.28■□□□□ 0.52
SCRIB-202ENST00000356994 USH1CQ9Y6N9 552 aa18.28■□□□□ 0.52
SCRIB-202ENST00000356994 EIF6P56537 245 aaKnown RBP18.28■□□□□ 0.52
SCRIB-202ENST00000356994 SDCCAG8Q86SQ7 713 aaPredicted RBP18.28■□□□□ 0.52
SCRIB-202ENST00000356994 RNF26Q9BY78 433 aaPredicted RBP18.28■□□□□ 0.52
SCRIB-202ENST00000356994 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.27■□□□□ 0.52
SCRIB-202ENST00000356994 USP17L12C9JPN9 530 aa18.27■□□□□ 0.52
SCRIB-202ENST00000356994 USP17L21D6R901 530 aa18.27■□□□□ 0.52
SCRIB-202ENST00000356994 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.52
SCRIB-202ENST00000356994 BCAS4Q8TDM0 211 aa18.27■□□□□ 0.52
SCRIB-202ENST00000356994 VTI1AQ96AJ9 217 aa18.27■□□□□ 0.52
SCRIB-202ENST00000356994 DHTKD1Q96HY7 919 aaPredicted RBP18.27■□□□□ 0.52
SCRIB-202ENST00000356994 H2AFZP0C0S5 128 aa18.27■□□□□ 0.52
SCRIB-202ENST00000356994 PHKG2P15735 406 aa18.27■□□□□ 0.52
SCRIB-202ENST00000356994 H2AFVQ71UI9 128 aa18.27■□□□□ 0.52
SCRIB-202ENST00000356994 SYMPKQ92797 1274 aaKnown RBP18.27■□□□□ 0.52
SCRIB-202ENST00000356994 LIG3P49916 1009 aa18.27■□□□□ 0.51
SCRIB-202ENST00000356994 GUCY2FP51841 1108 aa18.27■□□□□ 0.51
SCRIB-202ENST00000356994 FMNL1O95466 1100 aaPredicted RBP18.26■□□□□ 0.51
SCRIB-202ENST00000356994 PHBP35232 272 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 IRX4P78413 519 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 FAM47AQ5JRC9 791 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 RNF14Q9UBS8 474 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 TMEM2Q9UHN6 1383 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 ZSCAN20P17040 1043 aaPredicted RBP18.26■□□□□ 0.51
SCRIB-202ENST00000356994 RWDD2BP57060 319 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 MAPKAPK5Q8IW41 473 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 CCT6BQ92526 530 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 RABEP2Q9H5N1 569 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 VCX3AQ9NNX9 186 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 CA8P35219 290 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 MAP3K21Q5TCX8 1036 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 TGFBRAP1Q8WUH2 860 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 AK8Q96MA6 479 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 CLIC6Q96NY7 704 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 BIN2Q9UBW5 565 aaPredicted RBP18.26■□□□□ 0.51
SCRIB-202ENST00000356994 BAIAP2L1Q9UHR4 511 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 hCG_1642624A0A1W2PR95 340 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 PPP1R12CQ9BZL4 782 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 TFCP2L1Q9NZI6 479 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 SP4Q02446 784 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 PANK4Q9NVE7 773 aa18.26■□□□□ 0.51
SCRIB-202ENST00000356994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.26■□□□□ 0.511e-6■■■□□ 16.8
SCRIB-202ENST00000356994 HARSP12081 509 aaKnown RBP18.25■□□□□ 0.51
SCRIB-202ENST00000356994 ZNF827Q17R98 1081 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 PDCD7Q8N8D1 485 aaKnown RBP18.25■□□□□ 0.51
SCRIB-202ENST00000356994 CCDC89Q8N998 374 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 PNMA1Q8ND90 353 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 RIC8AQ9NPQ8 531 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 MLH3Q9UHC1 1453 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 DTNBO60941 627 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 ATP2A3Q93084 1043 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 GBP5Q96PP8 586 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 PDE11AQ9HCR9 933 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 TMOD4Q9NZQ9 345 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 PCDHA12Q9UN75 941 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 CASQ2O14958 399 aaPredicted RBP18.25■□□□□ 0.51
SCRIB-202ENST00000356994 PTGDRQ13258 359 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 VPS37BQ9H9H4 285 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 MAGI3Q5TCQ9 1506 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 CCDC151A5D8V7 595 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 DNAJC8O75937 253 aaPredicted RBP18.25■□□□□ 0.51
SCRIB-202ENST00000356994 CD2BP2O95400 341 aaKnown RBP18.25■□□□□ 0.51
SCRIB-202ENST00000356994 RFC1P35251 1148 aaPredicted RBP18.25■□□□□ 0.51
SCRIB-202ENST00000356994 ARHGAP44Q17R89 818 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 LINC00301Q8NCQ3 95 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 CACTINQ8WUQ7 758 aaKnown RBP18.25■□□□□ 0.51
SCRIB-202ENST00000356994 USTQ9Y2C2 406 aa18.25■□□□□ 0.51
SCRIB-202ENST00000356994 H0YCG3 227 aa18.24■□□□□ 0.51
SCRIB-202ENST00000356994 ZBED4O75132 1171 aa18.24■□□□□ 0.51
SCRIB-202ENST00000356994 TBC1D8O95759 1140 aa18.24■□□□□ 0.51
SCRIB-202ENST00000356994 CASP14P31944 242 aa18.24■□□□□ 0.51
SCRIB-202ENST00000356994 EPHB4P54760 987 aa18.24■□□□□ 0.51
SCRIB-202ENST00000356994 OTUD6AQ7L8S5 288 aa18.24■□□□□ 0.51
SCRIB-202ENST00000356994 CCDC117Q8IWD4 279 aaPredicted RBP18.24■□□□□ 0.51
SCRIB-202ENST00000356994 GDAP1L1Q96MZ0 367 aa18.24■□□□□ 0.51
SCRIB-202ENST00000356994 ATG3Q9NT62 314 aa18.24■□□□□ 0.51
SCRIB-202ENST00000356994 RABGAP1Q9Y3P9 1069 aa18.24■□□□□ 0.51
SCRIB-202ENST00000356994 COL4A3BPQ9Y5P4 624 aa18.24■□□□□ 0.51
SCRIB-202ENST00000356994 PTCH1Q13635 1447 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms