RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 IFT81Q8WYA0 676 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 TRIM47Q96LD4 638 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 MYH13Q9UKX3 1938 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 DNA2P51530 1060 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 CFAP58Q5T655 872 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 FAM89AQ96GI7 184 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 PURBQ96QR8 312 aaKnown RBP21.06■□□□□ 0.96
PRPF39-201ENST00000355765 CCT8L2Q96SF2 557 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 OSBPL9Q96SU4 736 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 VCPKMTQ9H867 229 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 NFU1Q9UMS0 254 aa21.06■□□□□ 0.96
PRPF39-201ENST00000355765 ATXN2Q99700 1313 aaKnown RBP21.06■□□□□ 0.96
PRPF39-201ENST00000355765 ERICH2A1L162 156 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 RASSF10A6NK89 507 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 H7C1D1 291 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 NF2P35240 595 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 CARSP49589 748 aaKnown RBP21.05■□□□□ 0.96
PRPF39-201ENST00000355765 PTGISQ16647 500 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 TTC38Q5R3I4 469 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 C8orf74Q6P047 294 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 SLC40A1Q9NP59 571 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 RBM12Q9NTZ6 932 aaKnown RBP21.05■□□□□ 0.96
PRPF39-201ENST00000355765 PDHBP11177 359 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 TATP17735 454 aaPredicted RBP21.05■□□□□ 0.96
PRPF39-201ENST00000355765 NR1D1P20393 614 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 VAV2P52735 878 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 CEP85LQ5SZL2 805 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 NLRP14Q86W24 1093 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 ANKRD13CQ8N6S4 541 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 ODF2LQ9ULJ1 636 aa21.05■□□□□ 0.96
PRPF39-201ENST00000355765 E7EVH7 732 aa21.04■□□□□ 0.96
PRPF39-201ENST00000355765 ZPR1O75312 459 aa21.04■□□□□ 0.96
PRPF39-201ENST00000355765 TACC1O75410 805 aa21.04■□□□□ 0.96
PRPF39-201ENST00000355765 CABP4P57796 275 aa21.04■□□□□ 0.96
PRPF39-201ENST00000355765 UBE3CQ15386 1083 aa21.04■□□□□ 0.96
PRPF39-201ENST00000355765 KDM7AQ6ZMT4 941 aa21.04■□□□□ 0.96
PRPF39-201ENST00000355765 IFNL2Q8IZJ0 200 aa21.04■□□□□ 0.96
PRPF39-201ENST00000355765 MYCBPAPQ8TBZ2 947 aa21.04■□□□□ 0.96
PRPF39-201ENST00000355765 MS4A14Q96JA4 679 aa21.04■□□□□ 0.96
PRPF39-201ENST00000355765 A0A1W2PQC6 194 aa21.04■□□□□ 0.96
PRPF39-201ENST00000355765 PPP1R37O75864 691 aa21.04■□□□□ 0.96
PRPF39-201ENST00000355765 ATF3P18847 181 aa21.04■□□□□ 0.96
PRPF39-201ENST00000355765 HPDP32754 393 aaPredicted RBP21.04■□□□□ 0.96
PRPF39-201ENST00000355765 PREPLQ4J6C6 727 aaPredicted RBP21.04■□□□□ 0.96
PRPF39-201ENST00000355765 SYNE4Q8N205 404 aa21.04■□□□□ 0.96
PRPF39-201ENST00000355765 PPANQ9NQ55 473 aaKnown RBP21.04■□□□□ 0.96
PRPF39-201ENST00000355765 PDS5AQ29RF7 1337 aaKnown RBP21.04■□□□□ 0.96
PRPF39-201ENST00000355765 MCM7P33993 719 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 PHKA1P46020 1223 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 SPA17Q15506 151 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 ZNF662Q6ZS27 426 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 SPATS2Q86XZ4 545 aaKnown RBP21.03■□□□□ 0.96
PRPF39-201ENST00000355765 STAG1Q8WVM7 1258 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 CCDC42Q96M95 316 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 MAGEC2Q9UBF1 373 aaPredicted RBP21.03■□□□□ 0.96
PRPF39-201ENST00000355765 FRMD3A2A2Y4 597 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 NUTM2BA6NNL0 878 aaPredicted RBP21.03■□□□□ 0.96
PRPF39-201ENST00000355765 NUTM2EB1AL46 878 aaPredicted RBP21.03■□□□□ 0.96
PRPF39-201ENST00000355765 PKN1Q16512 942 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 IL17AQ16552 155 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 TYW1BQ6NUM6 668 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 TRIM58Q8NG06 486 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 CAVIN3Q969G5 261 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 PLIN2Q99541 437 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 UBAC1Q9BSL1 405 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 KRT23Q9C075 422 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 V9GY48 417 aaPredicted RBP21.03■□□□□ 0.96
PRPF39-201ENST00000355765 PATL2C9JE40 543 aaKnown RBP21.03■□□□□ 0.96
PRPF39-201ENST00000355765 GLI1P08151 1106 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 SMTNP53814 917 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 TBC1D8BQ0IIM8 1120 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 IFIT5Q13325 482 aaKnown RBP21.03■□□□□ 0.96
PRPF39-201ENST00000355765 KRT28Q7Z3Y7 464 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 RPAINQ86UA6 219 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 IFIH1Q9BYX4 1025 aaKnown RBP21.03■□□□□ 0.96
PRPF39-201ENST00000355765 TTYH3Q9C0H2 523 aa21.03■□□□□ 0.96
PRPF39-201ENST00000355765 ADAMTS7Q9UKP4 1686 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 TJP1Q07157 1748 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 TCRBV5S4A2TA0A5A2 114 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 CYP27B1O15528 508 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 C21orf2O43822 256 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 RASSF9O75901 435 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 SPRED3Q2MJR0 410 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 IQCA1Q86XH1 822 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 ADSSL1Q8N142 457 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 MAGEB6Q8N7X4 407 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 CCDC114Q96M63 670 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 TUBGCP2Q9BSJ2 902 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 PHF20Q9BVI0 1012 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 CNNM2Q9H8M5 875 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 EXOC1Q9NV70 894 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 SCN11AQ9UI33 1791 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 PKD1L3Q7Z443 1732 aa21.02■□□□□ 0.96
PRPF39-201ENST00000355765 NKRFO15226 690 aaKnown RBP eCLIP21.02■□□□□ 0.95
PRPF39-201ENST00000355765 XBP1P17861 261 aa21.02■□□□□ 0.95
PRPF39-201ENST00000355765 CCDC170Q8IYT3 715 aa21.02■□□□□ 0.95
PRPF39-201ENST00000355765 MIEF2Q96C03 454 aa21.02■□□□□ 0.95
PRPF39-201ENST00000355765 VEZTQ9HBM0 779 aa21.02■□□□□ 0.95
PRPF39-201ENST00000355765 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.02■□□□□ 0.95
PRPF39-201ENST00000355765 BAZ2BQ9UIF8 2168 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms