RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 MAGEA1P43355 309 aa16.95■□□□□ 0.3
STRN3-201ENST00000355683 FXR1P51114 621 aaKnown RBP eCLIP16.95■□□□□ 0.3
STRN3-201ENST00000355683 CYP26C1Q6V0L0 522 aa16.95■□□□□ 0.3
STRN3-201ENST00000355683 MEGF6O75095 1541 aa16.95■□□□□ 0.3
STRN3-201ENST00000355683 PPP6R2O75170 966 aa16.95■□□□□ 0.3
STRN3-201ENST00000355683 ABCB4P21439 1286 aa16.95■□□□□ 0.3
STRN3-201ENST00000355683 NONOQ15233 471 aaKnown RBP eCLIP16.95■□□□□ 0.32e-6■■■□□ 18.2
STRN3-201ENST00000355683 C3orf67Q6ZVT6 689 aa16.95■□□□□ 0.3
STRN3-201ENST00000355683 ZNF804AQ7Z570 1209 aa16.95■□□□□ 0.3
STRN3-201ENST00000355683 DNAAF5Q86Y56 855 aa16.95■□□□□ 0.3
STRN3-201ENST00000355683 CEP112Q8N8E3 955 aa16.95■□□□□ 0.3
STRN3-201ENST00000355683 RIN2Q8WYP3 895 aaPredicted RBP16.95■□□□□ 0.3
STRN3-201ENST00000355683 SH2D3AQ9BRG2 576 aa16.95■□□□□ 0.3
STRN3-201ENST00000355683 SLFN14P0C7P3 912 aa16.95■□□□□ 0.3
STRN3-201ENST00000355683 MKRN4PQ13434 485 aaPredicted RBP16.95■□□□□ 0.3
STRN3-201ENST00000355683 LONRF2Q1L5Z9 754 aa16.95■□□□□ 0.3
STRN3-201ENST00000355683 MRRFQ96E11 262 aaKnown RBP16.95■□□□□ 0.3
STRN3-201ENST00000355683 TTF2Q9UNY4 1162 aaKnown RBP16.95■□□□□ 0.3
STRN3-201ENST00000355683 FAN1Q9Y2M0 1017 aa16.95■□□□□ 0.3
STRN3-201ENST00000355683 ANKRD62A6NC57 917 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 KLK7P49862 253 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 WDR78Q5VTH9 848 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 NBPF11Q86T75 865 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 REXO1Q8N1G1 1221 aaKnown RBP16.94■□□□□ 0.3
STRN3-201ENST00000355683 STK32BQ9NY57 414 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 GOLGB1Q14789 3259 aaKnown RBP16.94■□□□□ 0.3
STRN3-201ENST00000355683 CFBP00751 764 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 FCER1AP12319 257 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 PRCPP42785 496 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 CALCRLQ16602 461 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 TMC4Q7Z404 712 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 CCDC25Q86WR0 208 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 OR8K1Q8NGG5 319 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 TBCKQ8TEA7 893 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 TACC1O75410 805 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 ERLIN2O94905 339 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 PRKG1Q13976 671 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 ALS2CR12Q96Q35 445 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 TUBGCP2Q9BSJ2 902 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 RBM28Q9NW13 759 aaKnown RBP16.94■□□□□ 0.3
STRN3-201ENST00000355683 PALLDQ8WX93 1383 aa16.94■□□□□ 0.3
STRN3-201ENST00000355683 GOLGA6L7A0A1B0GV03 622 aa16.93■□□□□ 0.3
STRN3-201ENST00000355683 RASSF7Q02833 373 aa16.93■□□□□ 0.3
STRN3-201ENST00000355683 C2orf54Q08AI8 447 aa16.93■□□□□ 0.3
STRN3-201ENST00000355683 DBNDD1Q9H9R9 158 aa16.93■□□□□ 0.3
STRN3-201ENST00000355683 SRPRBQ9Y5M8 271 aaKnown RBP16.93■□□□□ 0.3
STRN3-201ENST00000355683 PLCG1P19174 1290 aa16.93■□□□□ 0.3
STRN3-201ENST00000355683 ST5P78524 1137 aa16.93■□□□□ 0.3
STRN3-201ENST00000355683 IFIH1Q9BYX4 1025 aaKnown RBP16.93■□□□□ 0.3
STRN3-201ENST00000355683 FOXP1Q9H334 677 aaPredicted RBP16.93■□□□□ 0.3
STRN3-201ENST00000355683 KDM6AO15550 1401 aaPredicted RBP16.92■□□□□ 0.3
STRN3-201ENST00000355683 CHD2O14647 1828 aaKnown RBP16.92■□□□□ 0.3
STRN3-201ENST00000355683 GDF11O95390 407 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 GNA11P29992 359 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 TOB1P50616 345 aaPredicted RBP16.92■□□□□ 0.3
STRN3-201ENST00000355683 ITPK1Q13572 414 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 ARHGAP44Q17R89 818 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 SLC30A10Q6XR72 485 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 PTF1AQ7RTS3 328 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 FAM84BQ96KN1 310 aaPredicted RBP16.92■□□□□ 0.3
STRN3-201ENST00000355683 ABCB6Q9NP58 842 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 ZNF185O15231 689 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 BMP15O95972 392 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 LIFRP42702 1097 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 CASP7P55210 303 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 CCDC174Q6PII3 467 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 DDX41Q9UJV9 622 aaKnown RBP16.92■□□□□ 0.3
STRN3-201ENST00000355683 PACSIN2Q9UNF0 486 aaPredicted RBP16.92■□□□□ 0.3
STRN3-201ENST00000355683 ESYT3A0FGR9 886 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 EBAG9O00559 213 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 STX10O60499 249 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 SLC1A4P43007 532 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 PRR16Q569H4 304 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 SARM1Q6SZW1 724 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 RAD9BQ6WBX8 426 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 HDXQ7Z353 690 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 PRM3Q9NNZ6 103 aa16.92■□□□□ 0.3
STRN3-201ENST00000355683 PSDA5PKW4 1024 aaPredicted RBP16.91■□□□□ 0.3
STRN3-201ENST00000355683 FTCDO95954 541 aa16.91■□□□□ 0.3
STRN3-201ENST00000355683 CD44P16070 742 aaKnown RBP16.91■□□□□ 0.3
STRN3-201ENST00000355683 GNAQP50148 359 aa16.91■□□□□ 0.3
STRN3-201ENST00000355683 NFIXQ14938 502 aa16.91■□□□□ 0.3
STRN3-201ENST00000355683 TERF2Q15554 542 aa16.91■□□□□ 0.3
STRN3-201ENST00000355683 FERMT2Q96AC1 680 aa16.91■□□□□ 0.3
STRN3-201ENST00000355683 CNOT6LQ96LI5 555 aaKnown RBP16.91■□□□□ 0.3
STRN3-201ENST00000355683 DCP1AQ9NPI6 582 aaPredicted RBP16.91■□□□□ 0.3
STRN3-201ENST00000355683 MYO6Q9UM54 1294 aa16.91■□□□□ 0.3
STRN3-201ENST00000355683 POTEB2H3BUK9 544 aa16.91■□□□□ 0.3
STRN3-201ENST00000355683 IKBKBO14920 756 aa16.91■□□□□ 0.3
STRN3-201ENST00000355683 POLR2FP61218 127 aaKnown RBP16.91■□□□□ 0.3
STRN3-201ENST00000355683 PABPC4Q13310 644 aaKnown RBP eCLIP16.91■□□□□ 0.3
STRN3-201ENST00000355683 TMTC1Q8IUR5 882 aa16.91■□□□□ 0.3
STRN3-201ENST00000355683 RGPD8O14715 1765 aaPredicted RBP16.91■□□□□ 0.3
STRN3-201ENST00000355683 KRT13P13646 458 aa16.91■□□□□ 0.3
STRN3-201ENST00000355683 TTC31Q49AM3 519 aaPredicted RBP16.91■□□□□ 0.3
STRN3-201ENST00000355683 PHLDB2Q86SQ0 1253 aa16.91■□□□□ 0.3
STRN3-201ENST00000355683 ANKRD7Q92527 254 aa16.91■□□□□ 0.3
STRN3-201ENST00000355683 RNF26Q9BY78 433 aaPredicted RBP16.91■□□□□ 0.3
STRN3-201ENST00000355683 USP40Q9NVE5 1235 aa16.91■□□□□ 0.3
STRN3-201ENST00000355683 FBXO2Q9UK22 296 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms