RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 LINC00116Q8NCU8 138 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 TMEM60Q9H2L4 133 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 HAUS4Q9H6D7 363 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 PCDHA6Q9UN73 950 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 PCDHA8Q9Y5H6 950 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 NT5C2P49902 561 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 PMS1P54277 932 aaKnown RBP13.6□□□□□ -0.23
DDX4-201ENST00000353507 SLC10A5Q5PT55 438 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 C12orf60Q5U649 245 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 GALNT17Q6IS24 598 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 NBPF5PQ86XG9 351 aaPredicted RBP13.6□□□□□ -0.23
DDX4-201ENST00000353507 NOC3LQ8WTT2 800 aaKnown RBP13.6□□□□□ -0.23
DDX4-201ENST00000353507 DYNLL2Q96FJ2 89 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 PDE11AQ9HCR9 933 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 ABCB6Q9NP58 842 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 IL17RBQ9NRM6 502 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 H3BQF6 201 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 LAD1O00515 517 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 KCNQ2O43526 872 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 IPO7O95373 1038 aaKnown RBP13.6□□□□□ -0.23
DDX4-201ENST00000353507 TUBBP07437 444 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 KIAA1328Q86T90 577 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 CCSER1Q9C0I3 900 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 TCP11L1Q9NUJ3 509 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 MAD2L2Q9UI95 211 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 STX8Q9UNK0 236 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 NRAPQ86VF7 1730 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 USP17L3A6NCW0 530 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 USP17L4A6NCW7 530 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 RHOBTB3O94955 611 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 DNM2P50570 870 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 VSNL1P62760 191 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 CCDC122Q5T0U0 273 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 NCAPH2Q6IBW4 605 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 USP17L1Q7RTZ2 530 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 ZNF444Q8N0Y2 327 aaPredicted RBP13.6□□□□□ -0.23
DDX4-201ENST00000353507 CSGALNACT2Q8N6G5 542 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 DAGLBQ8NCG7 672 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 SETDB2Q96T68 719 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 DNAJC7Q99615 494 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 ZNHIT6Q9NWK9 470 aaKnown RBP13.6□□□□□ -0.23
DDX4-201ENST00000353507 TRIM10Q9UDY6 481 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 CAPN11Q9UMQ6 739 aa13.6□□□□□ -0.23
DDX4-201ENST00000353507 REXO2Q9Y3B8 237 aaKnown RBP13.6□□□□□ -0.23
DDX4-201ENST00000353507 B4DLN1 442 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 M0R2N6 131 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 KLRC4O43908 158 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 LDHBP07195 334 aaKnown RBP13.59□□□□□ -0.23
DDX4-201ENST00000353507 TRIM21P19474 475 aaKnown RBP13.59□□□□□ -0.23
DDX4-201ENST00000353507 HNRNPH2P55795 449 aaKnown RBP13.59□□□□□ -0.23
DDX4-201ENST00000353507 KRT83P78385 493 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 AMPD2Q01433 879 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 GIMAP8Q8ND71 665 aaPredicted RBP13.59□□□□□ -0.23
DDX4-201ENST00000353507 NAV1Q8NEY1 1877 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 PCMTD1Q96MG8 357 aaPredicted RBP13.59□□□□□ -0.23
DDX4-201ENST00000353507 EXOC1Q9NV70 894 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 KBTBD4Q9NVX7 518 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 BARHL2Q9NY43 387 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 STXBP3O00186 592 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 CYLC1P35663 651 aaPredicted RBP13.59□□□□□ -0.23
DDX4-201ENST00000353507 GYS2P54840 703 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 SEMA3FQ13275 785 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 CABP7Q86V35 215 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 EHBP1Q8NDI1 1231 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 EXOC4Q96A65 974 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 DHTKD1Q96HY7 919 aaPredicted RBP13.59□□□□□ -0.23
DDX4-201ENST00000353507 CUEDC2Q9H467 287 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 MAGEF1Q9HAY2 307 aa13.59□□□□□ -0.23
DDX4-201ENST00000353507 BICDL2A1A5D9 508 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 PRPHP41219 470 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 LMAN1P49257 510 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 KCNQ4P56696 695 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 FAM114A1Q8IWE2 563 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 CCDC24Q8N4L8 307 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 NOA1Q8NC60 698 aaKnown RBP13.58□□□□□ -0.24
DDX4-201ENST00000353507 ZNF507Q8TCN5 953 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 SH3RF3Q8TEJ3 882 aaPredicted RBP13.58□□□□□ -0.24
DDX4-201ENST00000353507 ANKS1AQ92625 1134 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 TUBGCP2Q9BSJ2 902 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 ACBD3Q9H3P7 528 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 VPS18Q9P253 973 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 ADAM21Q9UKJ8 722 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 L1RE1Q9UN81 338 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 PSMD14O00487 310 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 ENC1O14682 589 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 KRT86O43790 486 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 BAG3O95817 575 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 OR52Z1P0C646 297 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 PLCG1P19174 1290 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 MTIF2P46199 727 aaKnown RBP13.58□□□□□ -0.24
DDX4-201ENST00000353507 NAPAP54920 295 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 ASIC1P78348 528 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 PDE4DQ08499 809 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 HSP90B2PQ58FF3 399 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 TTI2Q6NXR4 508 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 TXNRD3Q86VQ6 643 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 NUP58Q9BVL2 599 aa13.58□□□□□ -0.24
DDX4-201ENST00000353507 ROBO3Q96MS0 1386 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 CYTH3O43739 400 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 HERVK_113P62684 666 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms