RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 GUCY2DQ02846 1103 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 LMBR1LQ6UX01 489 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 SNX29Q8TEQ0 813 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 NACA2Q9H009 215 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 LRWD1Q9UFC0 647 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 SHROOM2Q13796 1616 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 PYGLP06737 847 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 CDC37L1Q7L3B6 337 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 MAPK13O15264 365 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 CDR2Q01850 454 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 RUBCNQ92622 972 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 MID2Q9UJV3 735 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 ICE2Q659A1 982 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 RTEL1Q9NZ71 1219 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 ARMCX3Q9UH62 379 aaPredicted RBP21.11■□□□□ 0.97
HDAC4-201ENST00000345617 SERPINB10P48595 397 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 APPBP2Q92624 585 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 SH3GL3Q99963 347 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 CLASP1Q7Z460 1538 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 FAM83GA6ND36 823 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 CEP19Q96LK0 163 aa21.11■□□□□ 0.97
HDAC4-201ENST00000345617 EPN1Q9Y6I3 576 aaPredicted RBP21.11■□□□□ 0.97
HDAC4-201ENST00000345617 BRD1O95696 1058 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.1■□□□□ 0.97
HDAC4-201ENST00000345617 ABTB1Q969K4 478 aaPredicted RBP21.1■□□□□ 0.97
HDAC4-201ENST00000345617 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.1■□□□□ 0.97
HDAC4-201ENST00000345617 ARHGAP10A1A4S6 786 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 PGRMC1O00264 195 aaKnown RBP21.1■□□□□ 0.97
HDAC4-201ENST00000345617 PICALMQ13492 652 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 OTUD6AQ7L8S5 288 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 KLHL29Q96CT2 875 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 C14orf93Q9H972 538 aaKnown RBP21.1■□□□□ 0.97
HDAC4-201ENST00000345617 ADCY2Q08462 1091 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 PRPSAP1Q14558 356 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 PBKQ96KB5 322 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 TTC25Q96NG3 672 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 MCF2P10911 925 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 EEF1B2P24534 225 aaKnown RBP21.1■□□□□ 0.97
HDAC4-201ENST00000345617 ATG16L1Q676U5 607 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 GUCY2CP25092 1073 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 F8W8V4 182 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 KMT5BQ4FZB7 885 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 LCMT1Q9UIC8 334 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 USTQ9Y2C2 406 aa21.1■□□□□ 0.97
HDAC4-201ENST00000345617 NEK2P51955 445 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 OCA2Q04671 838 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 NOSTRINQ8IVI9 506 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 DSCC1Q9BVC3 393 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 BICC1Q9H694 974 aaKnown RBP21.09■□□□□ 0.97
HDAC4-201ENST00000345617 FANCAO15360 1455 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 TFCP2Q12800 502 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 SLFNL1Q499Z3 407 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 MYOCDQ8IZQ8 938 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 AOC3Q16853 763 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 MAP7D3Q8IWC1 876 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 DIS3L2Q8IYB7 885 aaKnown RBP21.09■□□□□ 0.97
HDAC4-201ENST00000345617 ZNF274Q96GC6 653 aaPredicted RBP21.09■□□□□ 0.97
HDAC4-201ENST00000345617 PLIN2Q99541 437 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 TEX12Q9BXU0 123 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 GNGT2O14610 69 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 ATF7P17544 494 aaPredicted RBP21.09■□□□□ 0.97
HDAC4-201ENST00000345617 SCYL1Q96KG9 808 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 EYA3Q99504 573 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 PNOCQ13519 176 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 GIMAP4Q9NUV9 329 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 CCPG1Q9ULG6 757 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 ZBTB21Q9ULJ3 1066 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 CFAP74Q9C0B2 1584 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 MAP3K10Q02779 954 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 TTC19Q6DKK2 380 aaPredicted RBP21.09■□□□□ 0.97
HDAC4-201ENST00000345617 ABCC2Q92887 1545 aa21.09■□□□□ 0.97
HDAC4-201ENST00000345617 NR1D1P20393 614 aa21.08■□□□□ 0.97
HDAC4-201ENST00000345617 WDR7Q9Y4E6 1490 aa21.08■□□□□ 0.97
HDAC4-201ENST00000345617 NOP56O00567 594 aaKnown RBP21.08■□□□□ 0.97
HDAC4-201ENST00000345617 ECE1P42892 770 aa21.08■□□□□ 0.97
HDAC4-201ENST00000345617 PPP2R5AQ15172 486 aa21.08■□□□□ 0.97
HDAC4-201ENST00000345617 TADA2BQ86TJ2 420 aa21.08■□□□□ 0.97
HDAC4-201ENST00000345617 FMO2Q99518 471 aa21.08■□□□□ 0.97
HDAC4-201ENST00000345617 GLE1Q53GS7 698 aaKnown RBP21.08■□□□□ 0.97
HDAC4-201ENST00000345617 PLCH2O75038 1416 aa21.08■□□□□ 0.97
HDAC4-201ENST00000345617 FRMD3A2A2Y4 597 aa21.08■□□□□ 0.96
HDAC4-201ENST00000345617 NR1I2O75469 434 aa21.08■□□□□ 0.96
HDAC4-201ENST00000345617 COPS6Q7L5N1 327 aa21.08■□□□□ 0.96
HDAC4-201ENST00000345617 PIP4K2CQ8TBX8 421 aa21.08■□□□□ 0.96
HDAC4-201ENST00000345617 EP400NLQ6ZTU2 488 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 CHUKO15111 745 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 CMA1P23946 247 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 DMP1Q13316 513 aaPredicted RBP21.07■□□□□ 0.96
HDAC4-201ENST00000345617 WAPLQ7Z5K2 1190 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 NPATQ14207 1427 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 PCP11498 1178 aaKnown RBP21.07■□□□□ 0.96
HDAC4-201ENST00000345617 VPS41P49754 854 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 TRAIPQ9BWF2 469 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 PYGBP11216 843 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 TEDDM1Q5T9Z0 273 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 MAPK8IP1Q9UQF2 711 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 A0A1W2PQ27 194 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 A0A1W2PQ64 194 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 A0A1W2PQD8 194 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 SPATA1Q5VX52 437 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms