RNA–Protein interactions for RNA: ENST00000341926.7

CAST-204, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-204ENST00000341926 MAP3K11Q16584 847 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 ZNF362Q5T0B9 420 aaPredicted RBP9.08□□□□□ -0.96
CAST-204ENST00000341926 TMC4Q7Z404 712 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 FCHSD1Q86WN1 690 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 ZNF713Q8N859 430 aaPredicted RBP9.08□□□□□ -0.96
CAST-204ENST00000341926 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.08□□□□□ -0.96
CAST-204ENST00000341926 USP6NLQ92738 828 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 IFT43Q96FT9 208 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 GPATCH3Q96I76 525 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 FGD4Q96M96 766 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 TUBB2BQ9BVA1 445 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 CDCA7Q9BWT1 371 aaPredicted RBP9.08□□□□□ -0.96
CAST-204ENST00000341926 RTFDC1Q9BY42 306 aaPredicted RBP9.08□□□□□ -0.96
CAST-204ENST00000341926 ATAD3AQ9NVI7 634 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 SCINQ9Y6U3 715 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 KAT6BQ8WYB5 2073 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 USP47Q96K76 1375 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 TRAPPC8Q9Y2L5 1435 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 RPRD2Q5VT52 1461 aaKnown RBP9.08□□□□□ -0.96
CAST-204ENST00000341926 A0A1B0GVL5 298 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 STK25O00506 426 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 VAMP4O75379 141 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 CDC45O75419 566 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 GSTA2P09210 222 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 UBL4AP11441 157 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 USP46P62068 366 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 ARID5BQ14865 1188 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 CFAP58Q5T655 872 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 RNF187Q5TA31 235 aaPredicted RBP9.08□□□□□ -0.96
CAST-204ENST00000341926 Q6ZUG5 572 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 CCAR1Q8IX12 1150 aaKnown RBP9.08□□□□□ -0.96
CAST-204ENST00000341926 ARHGAP18Q8N392 663 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 DQX1Q8TE96 717 aaKnown RBP9.08□□□□□ -0.96
CAST-204ENST00000341926 FBXW7Q969H0 707 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 C8orf76Q96K31 380 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 SRPK1Q96SB4 655 aaKnown RBP9.08□□□□□ -0.96
CAST-204ENST00000341926 HNRNPABQ99729 332 aaKnown RBP9.08□□□□□ -0.96
CAST-204ENST00000341926 FAM192AQ9GZU8 254 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 SIL1Q9H173 461 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 TBCCD1Q9NVR7 557 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 FKBP14Q9NWM8 211 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 STK39Q9UEW8 545 aa9.08□□□□□ -0.96
CAST-204ENST00000341926 TTC7AQ9ULT0 858 aaPredicted RBP9.08□□□□□ -0.96
CAST-204ENST00000341926 ALADP13716 330 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 POLE2P56282 527 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 ELF3P78545 371 aaPredicted RBP9.07□□□□□ -0.96
CAST-204ENST00000341926 STIM1Q13586 685 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 NEUROD2Q15784 382 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 PCNX4Q63HM2 1172 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 RBM43Q6ZSC3 357 aaKnown RBP9.07□□□□□ -0.96
CAST-204ENST00000341926 LINC00469Q8N7U9 141 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 CNBD1Q8NA66 436 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 LILRB1Q8NHL6 650 aaPredicted RBP9.07□□□□□ -0.96
CAST-204ENST00000341926 AZIN2Q96A70 460 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 CEP295NLQ96MC4 621 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 TCF12Q99081 682 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 DRC3Q9H069 523 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 HAUS2Q9NVX0 235 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 POLR3AO14802 1390 aaPredicted RBP9.07□□□□□ -0.96
CAST-204ENST00000341926 SPDYE2BA6NHP3 402 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 SPDYE6P0CI01 402 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 TOP1P11387 765 aaKnown RBP9.07□□□□□ -0.96
CAST-204ENST00000341926 PORP16435 677 aaPredicted RBP9.07□□□□□ -0.96
CAST-204ENST00000341926 EIF2S2P20042 333 aaKnown RBP9.07□□□□□ -0.96
CAST-204ENST00000341926 SPDYE2Q495Y8 402 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 GRAMD4Q6IC98 578 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 WDR93Q6P2C0 686 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 C3orf67Q6ZVT6 689 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 LILRB2Q8N423 598 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 SCAIQ8N9R8 606 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 SPERTQ8NA61 448 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.07□□□□□ -0.96
CAST-204ENST00000341926 ANKRD49Q8WVL7 239 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 CEP63Q96MT8 703 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 DCTPP1Q9H773 170 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 IL20Q9NYY1 176 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 CABP1Q9NZU7 370 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 IP6K2Q9UHH9 426 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 MTUS1Q9ULD2 1270 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 AMOTL2Q9Y2J4 779 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 CPS1P31327 1500 aa9.07□□□□□ -0.96
CAST-204ENST00000341926 DIP2CQ9Y2E4 1556 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 NCKAP5LQ9HCH0 1330 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 SPDYE5A6NIY4 337 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 TSPAN1O60635 241 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 ZNF202O95125 648 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 GHRP10912 638 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 TUBA3CQ13748 450 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 GKAP1Q5VSY0 366 aaPredicted RBP9.06□□□□□ -0.96
CAST-204ENST00000341926 ZCCHC8Q6NZY4 707 aaKnown RBP9.06□□□□□ -0.96
CAST-204ENST00000341926 NLRP9Q7RTR0 991 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 CLMNQ96JQ2 1002 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 ALDH8A1Q9H2A2 487 aaPredicted RBP9.06□□□□□ -0.96
CAST-204ENST00000341926 TCF7L2Q9NQB0 619 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 RMND1Q9NWS8 449 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 GABBR1Q9UBS5 961 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 ZNF180Q9UJW8 692 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 SUPT6HQ7KZ85 1726 aaKnown RBP9.06□□□□□ -0.96
CAST-204ENST00000341926 CLTCL1P53675 1640 aa9.06□□□□□ -0.96
CAST-204ENST00000341926 NUP153P49790 1475 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms