RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 KIAA1328Q86T90 577 aa23.17■■□□□ 1.3
CLPB-202ENST00000340729 SRBD1Q8N5C6 995 aaKnown RBP23.17■■□□□ 1.3
CLPB-202ENST00000340729 CRACR2AQ9BSW2 395 aa23.17■■□□□ 1.3
CLPB-202ENST00000340729 FAM107BQ9H098 131 aa23.17■■□□□ 1.3
CLPB-202ENST00000340729 CACNA1SQ13698 1873 aa23.16■■□□□ 1.3
CLPB-202ENST00000340729 CICQ96RK0 1608 aaPredicted RBP23.16■■□□□ 1.3
CLPB-202ENST00000340729 RHOBTB3O94955 611 aa23.16■■□□□ 1.3
CLPB-202ENST00000340729 CALML3P27482 149 aa23.16■■□□□ 1.3
CLPB-202ENST00000340729 MCM7P33993 719 aa23.16■■□□□ 1.3
CLPB-202ENST00000340729 SF3B2Q13435 895 aaKnown RBP23.16■■□□□ 1.3
CLPB-202ENST00000340729 EFCAB13Q8IY85 973 aa23.16■■□□□ 1.3
CLPB-202ENST00000340729 SMARCC1Q92922 1105 aaPredicted RBP23.16■■□□□ 1.3
CLPB-202ENST00000340729 IQCDQ96DY2 449 aa23.16■■□□□ 1.3
CLPB-202ENST00000340729 PSMA7O14818 248 aa23.15■■□□□ 1.3
CLPB-202ENST00000340729 ZBED6P86452 979 aa23.15■■□□□ 1.3
CLPB-202ENST00000340729 TTC31Q49AM3 519 aaPredicted RBP23.15■■□□□ 1.3
CLPB-202ENST00000340729 DNAJC21Q5F1R6 531 aaKnown RBP23.15■■□□□ 1.3
CLPB-202ENST00000340729 FIGNQ5HY92 759 aa23.15■■□□□ 1.3
CLPB-202ENST00000340729 DZIP3Q86Y13 1208 aaKnown RBP23.15■■□□□ 1.3
CLPB-202ENST00000340729 GIMAP8Q8ND71 665 aaPredicted RBP23.15■■□□□ 1.3
CLPB-202ENST00000340729 SELENOOQ9BVL4 669 aa23.15■■□□□ 1.3
CLPB-202ENST00000340729 TSGA10Q9BZW7 698 aa23.15■■□□□ 1.3
CLPB-202ENST00000340729 ZNHIT6Q9NWK9 470 aaKnown RBP23.15■■□□□ 1.3
CLPB-202ENST00000340729 MAGEC2Q9UBF1 373 aaPredicted RBP23.15■■□□□ 1.3
CLPB-202ENST00000340729 TRIM49BA6NDI0 452 aa23.15■■□□□ 1.3
CLPB-202ENST00000340729 KLRC4O43908 158 aa23.15■■□□□ 1.3
CLPB-202ENST00000340729 ORC4O43929 436 aa23.15■■□□□ 1.3
CLPB-202ENST00000340729 IPO7O95373 1038 aaKnown RBP23.15■■□□□ 1.3
CLPB-202ENST00000340729 TTI2Q6NXR4 508 aa23.15■■□□□ 1.3
CLPB-202ENST00000340729 AMOTL1Q8IY63 956 aa23.15■■□□□ 1.3
CLPB-202ENST00000340729 MMGT1Q8N4V1 131 aa23.15■■□□□ 1.3
CLPB-202ENST00000340729 DHTKD1Q96HY7 919 aaPredicted RBP23.15■■□□□ 1.3
CLPB-202ENST00000340729 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.15■■□□□ 1.3
CLPB-202ENST00000340729 A0A1W2PQJ5 194 aa23.14■■□□□ 1.29
CLPB-202ENST00000340729 AGPSO00116 658 aa23.14■■□□□ 1.29
CLPB-202ENST00000340729 SRGAP2O75044 1071 aa23.14■■□□□ 1.29
CLPB-202ENST00000340729 PMS1P54277 932 aaKnown RBP23.14■■□□□ 1.29
CLPB-202ENST00000340729 DDB1Q16531 1140 aa23.14■■□□□ 1.29
CLPB-202ENST00000340729 NAALADL2Q58DX5 795 aa23.14■■□□□ 1.29
CLPB-202ENST00000340729 CCDC70Q6NSX1 233 aa23.14■■□□□ 1.29
CLPB-202ENST00000340729 AENQ8WTP8 325 aaKnown RBP23.14■■□□□ 1.29
CLPB-202ENST00000340729 SH3GLB2Q9NR46 395 aa23.14■■□□□ 1.29
CLPB-202ENST00000340729 EXOC1Q9NV70 894 aa23.14■■□□□ 1.29
CLPB-202ENST00000340729 FAM184BQ9ULE4 1060 aa23.14■■□□□ 1.29
CLPB-202ENST00000340729 LAMB2P55268 1798 aa23.14■■□□□ 1.29
CLPB-202ENST00000340729 GGCXP38435 758 aa23.13■■□□□ 1.29
CLPB-202ENST00000340729 GNL3LQ9NVN8 582 aaKnown RBP23.13■■□□□ 1.29
CLPB-202ENST00000340729 MAPK8IP1Q9UQF2 711 aa23.13■■□□□ 1.29
CLPB-202ENST00000340729 PRLRP16471 622 aa23.13■■□□□ 1.29
CLPB-202ENST00000340729 IGHMBP2P38935 993 aaKnown RBP23.13■■□□□ 1.29
CLPB-202ENST00000340729 FAM76AQ8TAV0 307 aa23.13■■□□□ 1.29
CLPB-202ENST00000340729 TRIM47Q96LD4 638 aa23.13■■□□□ 1.29
CLPB-202ENST00000340729 LACRTQ9GZZ8 138 aa23.13■■□□□ 1.29
CLPB-202ENST00000340729 NHEJ1Q9H9Q4 299 aaPredicted RBP23.13■■□□□ 1.29
CLPB-202ENST00000340729 MAGEF1Q9HAY2 307 aa23.13■■□□□ 1.29
CLPB-202ENST00000340729 KBTBD4Q9NVX7 518 aa23.13■■□□□ 1.29
CLPB-202ENST00000340729 BAZ2AQ9UIF9 1905 aaKnown RBP23.12■■□□□ 1.29
CLPB-202ENST00000340729 VAV2P52735 878 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 EIF5P55010 431 aaKnown RBP23.12■■□□□ 1.29
CLPB-202ENST00000340729 CCDC152Q4G0S7 254 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 ACSBG1Q96GR2 724 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 CCSER1Q9C0I3 900 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 THRAP3Q9Y2W1 955 aaKnown RBP23.12■■□□□ 1.29
CLPB-202ENST00000340729 SPATA31A5Q5VU36 1347 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 SPATA31A7Q8IWB4 1347 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 MYH14Q7Z406 1995 aaKnown RBP23.12■■□□□ 1.29
CLPB-202ENST00000340729 A0A0G2JS52 829 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 SMIM22K7EJ46 135 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 PPP1R2P41236 205 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 GBP6Q6ZN66 633 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 CAGE1Q8TC20 777 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 CAPZA3Q96KX2 299 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 TUBGCP2Q9BSJ2 902 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 CDCA7Q9BWT1 371 aaPredicted RBP23.12■■□□□ 1.29
CLPB-202ENST00000340729 CUEDC2Q9H467 287 aa23.12■■□□□ 1.29
CLPB-202ENST00000340729 RNF216Q9NWF9 866 aaPredicted RBP23.12■■□□□ 1.29
CLPB-202ENST00000340729 A0A1B0GUL6 1792 aa23.11■■□□□ 1.29
CLPB-202ENST00000340729 RCCD1A6NED2 376 aa23.11■■□□□ 1.29
CLPB-202ENST00000340729 RASSF10A6NK89 507 aa23.11■■□□□ 1.29
CLPB-202ENST00000340729 PDE2AO00408 941 aaPredicted RBP23.11■■□□□ 1.29
CLPB-202ENST00000340729 PACS2Q86VP3 889 aa23.11■■□□□ 1.29
CLPB-202ENST00000340729 FAM114A1Q8IWE2 563 aa23.11■■□□□ 1.29
CLPB-202ENST00000340729 BLIDQ8IZY5 108 aa23.11■■□□□ 1.29
CLPB-202ENST00000340729 MARCH10Q8NA82 808 aaPredicted RBP23.11■■□□□ 1.29
CLPB-202ENST00000340729 TRIM58Q8NG06 486 aa23.11■■□□□ 1.29
CLPB-202ENST00000340729 JRKLQ9Y4A0 524 aa23.11■■□□□ 1.29
CLPB-202ENST00000340729 MYBL2P10244 700 aa23.1■■□□□ 1.29
CLPB-202ENST00000340729 TRIM21P19474 475 aaKnown RBP23.1■■□□□ 1.29
CLPB-202ENST00000340729 HNRNPH3P31942 346 aaKnown RBP23.1■■□□□ 1.29
CLPB-202ENST00000340729 KIF5AQ12840 1032 aa23.1■■□□□ 1.29
CLPB-202ENST00000340729 SUSD4Q5VX71 490 aa23.1■■□□□ 1.29
CLPB-202ENST00000340729 ZSCAN29Q8IWY8 852 aaPredicted RBP23.1■■□□□ 1.29
CLPB-202ENST00000340729 SECISBP2LQ93073 1101 aaKnown RBP23.1■■□□□ 1.29
CLPB-202ENST00000340729 ERGIC2Q96RQ1 377 aa23.1■■□□□ 1.29
CLPB-202ENST00000340729 AGPAT5Q9NUQ2 364 aa23.1■■□□□ 1.29
CLPB-202ENST00000340729 SNX12Q9UMY4 172 aa23.1■■□□□ 1.29
CLPB-202ENST00000340729 LAMB1P07942 1786 aa23.1■■□□□ 1.29
CLPB-202ENST00000340729 A0A087WUV0 522 aaPredicted RBP23.1■■□□□ 1.29
CLPB-202ENST00000340729 BICDL2A1A5D9 508 aa23.1■■□□□ 1.29
CLPB-202ENST00000340729 GOLGA6BA6NDN3 693 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms