RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 ENOX1Q8TC92 643 aaKnown RBP18.86■□□□□ 0.61
CDK11B-201ENST00000340677 A6NHS1 94 aa18.85■□□□□ 0.61
CDK11B-201ENST00000340677 MYBL1P10243 752 aa18.85■□□□□ 0.61
CDK11B-201ENST00000340677 PPP4CP60510 307 aa18.85■□□□□ 0.61
CDK11B-201ENST00000340677 NSMCE1Q8WV22 266 aa18.85■□□□□ 0.61
CDK11B-201ENST00000340677 KCND1Q9NSA2 647 aa18.85■□□□□ 0.61
CDK11B-201ENST00000340677 QPCTLQ9NXS2 382 aa18.85■□□□□ 0.61
CDK11B-201ENST00000340677 SLC26A4O43511 780 aa18.85■□□□□ 0.61
CDK11B-201ENST00000340677 NEK2P51955 445 aa18.85■□□□□ 0.61
CDK11B-201ENST00000340677 ZNF34Q8IZ26 560 aa18.85■□□□□ 0.61
CDK11B-201ENST00000340677 VTI1AQ96AJ9 217 aa18.85■□□□□ 0.61
CDK11B-201ENST00000340677 HVCN1Q96D96 273 aa18.85■□□□□ 0.61
CDK11B-201ENST00000340677 MAK16Q9BXY0 300 aaKnown RBP18.85■□□□□ 0.61
CDK11B-201ENST00000340677 RPAP3Q9H6T3 665 aaPredicted RBP18.85■□□□□ 0.61
CDK11B-201ENST00000340677 LIN7AO14910 233 aaPredicted RBP18.84■□□□□ 0.61
CDK11B-201ENST00000340677 FOSL1P15407 271 aa18.84■□□□□ 0.61
CDK11B-201ENST00000340677 ATP4AP20648 1035 aa18.84■□□□□ 0.61
CDK11B-201ENST00000340677 HOXD12P35452 270 aa18.84■□□□□ 0.61
CDK11B-201ENST00000340677 ZNF75DP51815 510 aa18.84■□□□□ 0.61
CDK11B-201ENST00000340677 NLRP10Q86W26 655 aa18.84■□□□□ 0.61
CDK11B-201ENST00000340677 SWAP70Q9UH65 585 aa18.84■□□□□ 0.61
CDK11B-201ENST00000340677 ZNF330Q9Y3S2 320 aaPredicted RBP18.84■□□□□ 0.61
CDK11B-201ENST00000340677 TTC41PQ6P2S7 1318 aa18.84■□□□□ 0.61
CDK11B-201ENST00000340677 PLA2G4DQ86XP0 818 aa18.84■□□□□ 0.61
CDK11B-201ENST00000340677 CARD6Q9BX69 1037 aa18.84■□□□□ 0.61
CDK11B-201ENST00000340677 OCEL1Q9H607 264 aa18.84■□□□□ 0.61
CDK11B-201ENST00000340677 AASDHPPTQ9NRN7 309 aa18.84■□□□□ 0.61
CDK11B-201ENST00000340677 ZMAT5Q9UDW3 170 aaKnown RBP18.84■□□□□ 0.61
CDK11B-201ENST00000340677 WDHD1O75717 1129 aaPredicted RBP18.83■□□□□ 0.61
CDK11B-201ENST00000340677 HMGB2P26583 209 aaKnown RBP18.83■□□□□ 0.61
CDK11B-201ENST00000340677 HLFQ16534 295 aa18.83■□□□□ 0.61
CDK11B-201ENST00000340677 TBC1D10BQ4KMP7 808 aaPredicted RBP18.83■□□□□ 0.61
CDK11B-201ENST00000340677 AFAP1L1Q8TED9 768 aa18.83■□□□□ 0.61
CDK11B-201ENST00000340677 SPOCK3Q9BQ16 436 aa18.83■□□□□ 0.61
CDK11B-201ENST00000340677 VCPKMTQ9H867 229 aa18.83■□□□□ 0.61
CDK11B-201ENST00000340677 CCDC151A5D8V7 595 aa18.83■□□□□ 0.6
CDK11B-201ENST00000340677 GOLGA6L9A6NEM1 432 aa18.83■□□□□ 0.6
CDK11B-201ENST00000340677 KIAA0754O94854 1291 aa18.83■□□□□ 0.6
CDK11B-201ENST00000340677 COL19A1Q14993 1142 aa18.83■□□□□ 0.6
CDK11B-201ENST00000340677 HDXQ7Z353 690 aa18.83■□□□□ 0.6
CDK11B-201ENST00000340677 COMMD10Q9Y6G5 202 aa18.83■□□□□ 0.6
CDK11B-201ENST00000340677 SHOX2O60902 331 aaPredicted RBP18.82■□□□□ 0.6
CDK11B-201ENST00000340677 ARPC4P59998 168 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 PTPN12Q05209 780 aaKnown RBP18.82■□□□□ 0.6
CDK11B-201ENST00000340677 ARID5BQ14865 1188 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 CCDC121Q6ZUS5 278 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 LCA5Q86VQ0 697 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 PALB2Q86YC2 1186 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 GBP7Q8N8V2 638 aaPredicted RBP18.82■□□□□ 0.6
CDK11B-201ENST00000340677 SSX2IPQ9Y2D8 614 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 GMEB1Q9Y692 573 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 NEMFO60524 1076 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 CAMTA2O94983 1202 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 CTCFP49711 727 aaPredicted RBP18.82■□□□□ 0.6
CDK11B-201ENST00000340677 PARP10Q53GL7 1025 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 CCSAPQ6IQ19 270 aaPredicted RBP18.82■□□□□ 0.6
CDK11B-201ENST00000340677 PRPF40BQ6NWY9 871 aaKnown RBP18.82■□□□□ 0.6
CDK11B-201ENST00000340677 FAM196AQ6ZSG2 479 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.82■□□□□ 0.6
CDK11B-201ENST00000340677 LINC00116Q8NCU8 138 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 TNMDQ9H2S6 317 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 PIDD1Q9HB75 910 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 ANO10Q9NW15 660 aa18.82■□□□□ 0.6
CDK11B-201ENST00000340677 MSL3P1P0C860 447 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 ITIH3Q06033 890 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 LMBR1LQ6UX01 489 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 C11orf96Q7Z7L8 435 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 FAM200AQ8TCP9 573 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 GDPD2Q9HCC8 539 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 PA2G4Q9UQ80 394 aaKnown RBP18.81■□□□□ 0.6
CDK11B-201ENST00000340677 C4BP0C0L5 1744 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 SDSP20132 328 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 MCM3P25205 808 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 BPIFB4P59827 614 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 EIF2B5Q13144 721 aaKnown RBP18.81■□□□□ 0.6
CDK11B-201ENST00000340677 PLCB4Q15147 1175 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 CREB3L3Q68CJ9 461 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 GIMAP6Q6P9H5 292 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 MPP4Q96JB8 637 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 CEP295NLQ96MC4 621 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 JAKMIP1Q96N16 626 aaKnown RBP18.81■□□□□ 0.6
CDK11B-201ENST00000340677 KLHL42Q9P2K6 505 aa18.81■□□□□ 0.6
CDK11B-201ENST00000340677 HOOK1Q9UJC3 728 aaKnown RBP18.81■□□□□ 0.6
CDK11B-201ENST00000340677 MEFVO15553 781 aaPredicted RBP18.8■□□□□ 0.6
CDK11B-201ENST00000340677 AKR1B10O60218 316 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 CSF1RP07333 972 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 DYNC1I2Q13409 638 aaKnown RBP18.8■□□□□ 0.6
CDK11B-201ENST00000340677 SREK1Q8WXA9 508 aaKnown RBP18.8■□□□□ 0.6
CDK11B-201ENST00000340677 VMP1Q96GC9 406 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 IL1RAPL2Q9NP60 686 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 KLF15Q9UIH9 416 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 ZNF652Q9Y2D9 606 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 PALM3A6NDB9 673 aaPredicted RBP18.8■□□□□ 0.6
CDK11B-201ENST00000340677 SART1O43290 800 aaKnown RBP18.8■□□□□ 0.6
CDK11B-201ENST00000340677 CIAO1O76071 339 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 PDGFRBP09619 1106 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 ENDOUP21128 410 aaKnown RBP18.8■□□□□ 0.6
CDK11B-201ENST00000340677 TCF7P36402 384 aaPredicted RBP18.8■□□□□ 0.6
CDK11B-201ENST00000340677 ARHGAP25P42331 645 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 BLMHQ13867 455 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms