RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 CTAGE5O15320 804 aa13.28□□□□□ -0.28
C2orf88-201ENST00000340623 NEMFO60524 1076 aa13.28□□□□□ -0.28
C2orf88-201ENST00000340623 CTDNEP1O95476 244 aa13.28□□□□□ -0.28
C2orf88-201ENST00000340623 YEATS4O95619 227 aa13.28□□□□□ -0.28
C2orf88-201ENST00000340623 RESTQ13127 1097 aa13.28□□□□□ -0.28
C2orf88-201ENST00000340623 CALCRLQ16602 461 aa13.28□□□□□ -0.28
C2orf88-201ENST00000340623 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.28□□□□□ -0.28
C2orf88-201ENST00000340623 FOXP1Q9H334 677 aaPredicted RBP13.28□□□□□ -0.28
C2orf88-201ENST00000340623 GPBP1L1Q9HC44 474 aaPredicted RBP13.28□□□□□ -0.28
C2orf88-201ENST00000340623 RAVER2Q9HCJ3 691 aaKnown RBP13.28□□□□□ -0.28
C2orf88-201ENST00000340623 TAF1P21675 1872 aa13.28□□□□□ -0.28
C2orf88-201ENST00000340623 VGLL3A8MV65 326 aa13.28□□□□□ -0.28
C2orf88-201ENST00000340623 MAP3K9P80192 1104 aa13.28□□□□□ -0.28
C2orf88-201ENST00000340623 PRR16Q569H4 304 aa13.28□□□□□ -0.28
C2orf88-201ENST00000340623 CCAR2Q8N163 923 aaKnown RBP13.28□□□□□ -0.28
C2orf88-201ENST00000340623 ASTN2O75129 1339 aaPredicted RBP13.28□□□□□ -0.28
C2orf88-201ENST00000340623 SMARCE1Q969G3 411 aa13.28□□□□□ -0.28
C2orf88-201ENST00000340623 CLIC6Q96NY7 704 aa13.28□□□□□ -0.28
C2orf88-201ENST00000340623 SLF1Q9BQI6 1058 aa13.28□□□□□ -0.28
C2orf88-201ENST00000340623 USP17L15C9J2P7 530 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 USP17L13C9JLJ4 530 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 USP17L11C9JVI0 530 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 USP17L18D6R9N7 530 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 USP17L22D6RA61 530 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 USP17L17D6RBQ6 530 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 USP17L19D6RCP7 530 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 USP17L20D6RJB6 530 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 USP17L24Q0WX57 530 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 PTGDRQ13258 359 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 WWC2Q6AWC2 1192 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 GALNT17Q6IS24 598 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 USP17L6PQ6QN14 398 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 ZNF280CQ8ND82 737 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 TBCKQ8TEA7 893 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 ZFP91Q96JP5 570 aaPredicted RBP13.27□□□□□ -0.28
C2orf88-201ENST00000340623 RPAP3Q9H6T3 665 aaPredicted RBP13.27□□□□□ -0.28
C2orf88-201ENST00000340623 VCPKMTQ9H867 229 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 MYH3P11055 1940 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 STK36Q9NRP7 1315 aa13.27□□□□□ -0.28
C2orf88-201ENST00000340623 B4DLN1 442 aa13.27□□□□□ -0.29
C2orf88-201ENST00000340623 FBXO28Q9NVF7 368 aa13.27□□□□□ -0.29
C2orf88-201ENST00000340623 ANO10Q9NW15 660 aa13.27□□□□□ -0.29
C2orf88-201ENST00000340623 TESPA1A2RU30 521 aaPredicted RBP13.27□□□□□ -0.29
C2orf88-201ENST00000340623 CTNND1O60716 968 aaKnown RBP13.27□□□□□ -0.29
C2orf88-201ENST00000340623 TPM3P06753 285 aa13.27□□□□□ -0.29
C2orf88-201ENST00000340623 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
C2orf88-201ENST00000340623 DACH1Q9UI36 760 aa13.27□□□□□ -0.29
C2orf88-201ENST00000340623 ZDHHC9Q9Y397 364 aa13.27□□□□□ -0.29
C2orf88-201ENST00000340623 POLR2DO15514 142 aaKnown RBP13.26□□□□□ -0.29
C2orf88-201ENST00000340623 FDPSP14324 419 aaKnown RBP13.26□□□□□ -0.29
C2orf88-201ENST00000340623 KCNH3Q9ULD8 1083 aa13.26□□□□□ -0.29
C2orf88-201ENST00000340623 CUTAO60888 179 aa13.26□□□□□ -0.29
C2orf88-201ENST00000340623 FAM160A1Q05DH4 1040 aa13.26□□□□□ -0.29
C2orf88-201ENST00000340623 ARHGEF16Q5VV41 709 aa13.26□□□□□ -0.29
C2orf88-201ENST00000340623 NCAPH2Q6IBW4 605 aa13.26□□□□□ -0.29
C2orf88-201ENST00000340623 PRPF38AQ8NAV1 312 aaKnown RBP13.26□□□□□ -0.29
C2orf88-201ENST00000340623 STAMQ92783 540 aa13.26□□□□□ -0.29
C2orf88-201ENST00000340623 LRWD1Q9UFC0 647 aa13.26□□□□□ -0.29
C2orf88-201ENST00000340623 BACH1O14867 736 aa13.26□□□□□ -0.29
C2orf88-201ENST00000340623 CELF2O95319 508 aaKnown RBP13.26□□□□□ -0.29
C2orf88-201ENST00000340623 EGFRP00533 1210 aa13.26□□□□□ -0.29
C2orf88-201ENST00000340623 CDAN1Q8IWY9 1227 aa13.26□□□□□ -0.29
C2orf88-201ENST00000340623 RTEL1Q9NZ71 1219 aa13.26□□□□□ -0.29
C2orf88-201ENST00000340623 SORBS3O60504 671 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 MMP14P50281 582 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 FKBP1CQ5VVH2 108 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 MCF2L2Q86YR7 1114 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 SCYL3Q8IZE3 742 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 FAM177A1Q8N128 213 aaPredicted RBP13.25□□□□□ -0.29
C2orf88-201ENST00000340623 NAP1L4Q99733 375 aaKnown RBP13.25□□□□□ -0.29
C2orf88-201ENST00000340623 FEM1BQ9UK73 627 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 PCDHA7Q9UN72 937 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 PCDHB6Q9Y5E3 794 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 LIG1P18858 919 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 OSBPP22059 807 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 CCT6AP40227 531 aaKnown RBP13.25□□□□□ -0.29
C2orf88-201ENST00000340623 ZNF165P49910 485 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 AMPD3Q01432 767 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 SHROOM1Q2M3G4 852 aaPredicted RBP13.25□□□□□ -0.29
C2orf88-201ENST00000340623 C17orf53Q8N3J3 647 aaPredicted RBP13.25□□□□□ -0.29
C2orf88-201ENST00000340623 IQUBQ8NA54 791 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 SERPINC1P01008 464 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 TECP42680 631 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 ASIC1P78348 528 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
C2orf88-201ENST00000340623 KANK3Q6NY19 840 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 PYM1Q9BRP8 204 aaKnown RBP13.25□□□□□ -0.29
C2orf88-201ENST00000340623 SPZ1Q9BXG8 430 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 TMEM260Q9NX78 707 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 ANKRD36CQ5JPF3 1778 aa13.25□□□□□ -0.29
C2orf88-201ENST00000340623 ANKRD13AQ8IZ07 590 aa13.24□□□□□ -0.29
C2orf88-201ENST00000340623 SNX29Q8TEQ0 813 aa13.24□□□□□ -0.29
C2orf88-201ENST00000340623 AGXT2Q9BYV1 514 aa13.24□□□□□ -0.29
C2orf88-201ENST00000340623 DNAJC25Q9H1X3 360 aa13.24□□□□□ -0.29
C2orf88-201ENST00000340623 CNTNAP5Q8WYK1 1306 aa13.24□□□□□ -0.29
C2orf88-201ENST00000340623 BARHL2Q9NY43 387 aa13.24□□□□□ -0.29
C2orf88-201ENST00000340623 MAGEC2Q9UBF1 373 aaPredicted RBP13.24□□□□□ -0.29
C2orf88-201ENST00000340623 DDX25Q9UHL0 483 aaKnown RBP13.24□□□□□ -0.29
C2orf88-201ENST00000340623 PRR12Q9ULL5 1215 aa13.24□□□□□ -0.29
C2orf88-201ENST00000340623 ELP1O95163 1332 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms