RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 MYH6P13533 1939 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 TAF1LQ8IZX4 1826 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 PALM3A6NDB9 673 aaPredicted RBP11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 TBC1D7Q9P0N9 293 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 SYNRGQ9UMZ2 1314 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 TRIM49BA6NDI0 452 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 RCAN1P53805 252 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 ABCB5Q2M3G0 1257 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 LRRC8AQ8IWT6 810 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 KIAA1524Q8TCG1 905 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 PSMD14O00487 310 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 ATP2C1P98194 919 aaPredicted RBP11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 PRAMEF18Q5VWM3 479 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 ZBTB9Q96C00 473 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 TAB2Q9NYJ8 693 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 PCDHA1Q9Y5I3 950 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 GAKO14976 1311 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 TPM3P06753 285 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 SLFN14P0C7P3 912 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 NEK8Q86SG6 692 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 KIFC2Q96AC6 838 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 TMEM39BQ9GZU3 492 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 RREB1Q92766 1687 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 SBF2Q86WG5 1849 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 FAM170AA1A519 330 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 CD44P16070 742 aaKnown RBP11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 DACT2Q5SW24 774 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 CABP7Q86V35 215 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 HOMER2Q9NSB8 354 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 DACH1Q9UI36 760 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 FZD1Q9UP38 647 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 SNED1Q8TER0 1413 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 YDJCA8MPS7 323 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 BMP15O95972 392 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 ECE1P42892 770 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 NCAPHQ15003 741 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 CALCRLQ16602 461 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 TIGD1Q96MW7 591 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 FAM198AQ9UFP1 575 aa11.49□□□□□ -0.57
RBFOX1-202ENST00000340209 OR52Z1P0C646 297 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 PLCG1P19174 1290 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 ZNF76P36508 570 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 KANK3Q6NY19 840 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 DNAJC18Q9H819 358 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 CCDC88AQ3V6T2 1871 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 STRIP1Q5VSL9 837 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 C15orf52Q6ZUT6 534 aaKnown RBP11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 MRFAP1L1Q96HT8 127 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 TRIM47Q96LD4 638 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 DESI2Q9BSY9 194 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 PSTPIP2Q9H939 334 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 JMJD4Q9H9V9 463 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 PI4KBQ9UBF8 816 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 CHMP2AO43633 222 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 KRT18P05783 430 aaKnown RBP11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 NIM1KQ8IY84 436 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 LRWD1Q9UFC0 647 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 TUBE1Q9UJT0 475 aa11.48□□□□□ -0.57
RBFOX1-202ENST00000340209 UBR3Q6ZT12 1888 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 N4BP3O15049 544 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 CFBP00751 764 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 KRT25Q7Z3Z0 450 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 CPXCR1Q8N123 301 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 SNX29Q8TEQ0 813 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 RGS17Q9UGC6 210 aaPredicted RBP11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 A0A1B0GUL6 1792 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 TEX33O43247 280 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 CBFA2T2O43439 604 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 SLC37A4O43826 429 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 CDC37Q16543 378 aaPredicted RBP11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 QRICH1Q2TAL8 776 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 CERS3Q8IU89 383 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 CCAR2Q8N163 923 aaKnown RBP11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 TNFRSF25Q93038 417 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 ZNF543Q08ER8 600 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 R3HDM1Q15032 1099 aaKnown RBP11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 PTPN14Q15678 1187 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 CCDC93Q567U6 631 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 SH3BP5LQ7L8J4 393 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 ACER1Q8TDN7 264 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 NOC3LQ8WTT2 800 aaKnown RBP11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 NELFBQ8WX92 580 aa11.47□□□□□ -0.57
RBFOX1-202ENST00000340209 F5H6K3 240 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 KLRC3Q07444 240 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 ARMCX5Q6P1M9 558 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 JDP2Q8WYK2 163 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 CALML4Q96GE6 196 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 SLC39A2Q9NP94 309 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 RPN1P04843 607 aaKnown RBP11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 STAT3P40763 770 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 PDE4DQ08499 809 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 DGKZQ13574 1117 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 LRRC41Q15345 812 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 TMEM266Q2M3C6 531 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 ASPRV1Q53RT3 343 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 PRR16Q569H4 304 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 CC2D2BQ6DHV5 1058 aa11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.46□□□□□ -0.57
RBFOX1-202ENST00000340209 MLKLQ8NB16 471 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms