RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 VCPKMTQ9H867 229 aa24.24■■□□□ 1.47
VRK2-201ENST00000340157 HPSEQ9Y251 543 aa24.24■■□□□ 1.47
VRK2-201ENST00000340157 CCDC194A0A1B0GVG4 234 aa24.24■■□□□ 1.47
VRK2-201ENST00000340157 INPP5BP32019 993 aa24.24■■□□□ 1.47
VRK2-201ENST00000340157 L1TD1Q5T7N2 865 aaKnown RBP24.24■■□□□ 1.47
VRK2-201ENST00000340157 PPP1R18Q6NYC8 613 aa24.24■■□□□ 1.47
VRK2-201ENST00000340157 GOPCQ9HD26 462 aa24.24■■□□□ 1.47
VRK2-201ENST00000340157 SRPRBQ9Y5M8 271 aaKnown RBP24.24■■□□□ 1.47
VRK2-201ENST00000340157 CTNND1O60716 968 aaKnown RBP24.23■■□□□ 1.47
VRK2-201ENST00000340157 SNAP25P60880 206 aa24.23■■□□□ 1.47
VRK2-201ENST00000340157 ZYXQ15942 572 aaKnown RBP24.23■■□□□ 1.47
VRK2-201ENST00000340157 MAP3K11Q16584 847 aa24.23■■□□□ 1.47
VRK2-201ENST00000340157 INF2Q27J81 1249 aa24.23■■□□□ 1.47
VRK2-201ENST00000340157 SYDE2Q5VT97 1194 aa24.23■■□□□ 1.47
VRK2-201ENST00000340157 CKAP2LQ8IYA6 745 aa24.23■■□□□ 1.47
VRK2-201ENST00000340157 TSPY26PQ9H489 355 aa24.23■■□□□ 1.47
VRK2-201ENST00000340157 PHIPQ8WWQ0 1821 aa24.22■■□□□ 1.47
VRK2-201ENST00000340157 FAM83BQ5T0W9 1011 aa24.22■■□□□ 1.47
VRK2-201ENST00000340157 TMEM260Q9NX78 707 aa24.22■■□□□ 1.47
VRK2-201ENST00000340157 ZNF112Q9UJU3 913 aa24.22■■□□□ 1.47
VRK2-201ENST00000340157 FZD1Q9UP38 647 aa24.22■■□□□ 1.47
VRK2-201ENST00000340157 ADCY7P51828 1080 aa24.21■■□□□ 1.47
VRK2-201ENST00000340157 ATP2C1P98194 919 aaPredicted RBP24.21■■□□□ 1.47
VRK2-201ENST00000340157 SPECC1Q5M775 1068 aa24.21■■□□□ 1.47
VRK2-201ENST00000340157 ADARB2Q9NS39 739 aaKnown RBP24.21■■□□□ 1.47
VRK2-201ENST00000340157 BIN2Q9UBW5 565 aaPredicted RBP24.21■■□□□ 1.47
VRK2-201ENST00000340157 KINO60870 393 aaKnown RBP24.21■■□□□ 1.47
VRK2-201ENST00000340157 MCM7P33993 719 aa24.21■■□□□ 1.47
VRK2-201ENST00000340157 PTGDRQ13258 359 aa24.21■■□□□ 1.47
VRK2-201ENST00000340157 REXO1Q8N1G1 1221 aaKnown RBP24.21■■□□□ 1.47
VRK2-201ENST00000340157 C4orf32Q8N8J7 132 aa24.21■■□□□ 1.47
VRK2-201ENST00000340157 ZNF341Q9BYN7 854 aa24.21■■□□□ 1.47
VRK2-201ENST00000340157 PRR12Q9ULL5 1215 aa24.21■■□□□ 1.47
VRK2-201ENST00000340157 MYH7BA7E2Y1 1941 aa24.2■■□□□ 1.47
VRK2-201ENST00000340157 BMP15O95972 392 aa24.2■■□□□ 1.46
VRK2-201ENST00000340157 LMOD1P29536 600 aaPredicted RBP24.2■■□□□ 1.46
VRK2-201ENST00000340157 DCAF15Q66K64 600 aa24.2■■□□□ 1.46
VRK2-201ENST00000340157 KRT25Q7Z3Z0 450 aa24.2■■□□□ 1.46
VRK2-201ENST00000340157 ZNF579Q8NAF0 562 aaKnown RBP24.2■■□□□ 1.46
VRK2-201ENST00000340157 PANK2Q9BZ23 570 aa24.2■■□□□ 1.46
VRK2-201ENST00000340157 SH2D4AQ9H788 454 aa24.2■■□□□ 1.46
VRK2-201ENST00000340157 RIC8AQ9NPQ8 531 aa24.2■■□□□ 1.46
VRK2-201ENST00000340157 PITPNM2Q9BZ72 1349 aa24.2■■□□□ 1.46
VRK2-201ENST00000340157 ZNF202O95125 648 aa24.19■■□□□ 1.46
VRK2-201ENST00000340157 CLK2P49760 499 aaKnown RBP24.19■■□□□ 1.46
VRK2-201ENST00000340157 JAKMIP3Q5VZ66 844 aa24.19■■□□□ 1.46
VRK2-201ENST00000340157 CSRNP2Q9H175 543 aa24.19■■□□□ 1.46
VRK2-201ENST00000340157 PPP2R3BQ9Y5P8 575 aa24.19■■□□□ 1.46
VRK2-201ENST00000340157 STAT2P52630 851 aa24.19■■□□□ 1.46
VRK2-201ENST00000340157 IKQ13123 557 aaPredicted RBP24.19■■□□□ 1.46
VRK2-201ENST00000340157 GINM1Q9NU53 330 aa24.19■■□□□ 1.46
VRK2-201ENST00000340157 PAPPA2Q9BXP8 1791 aa24.18■■□□□ 1.46
VRK2-201ENST00000340157 EDIL3O43854 480 aa24.18■■□□□ 1.46
VRK2-201ENST00000340157 TAL1P17542 331 aaPredicted RBP24.18■■□□□ 1.46
VRK2-201ENST00000340157 NONOQ15233 471 aaKnown RBP eCLIP24.18■■□□□ 1.46
VRK2-201ENST00000340157 IL17AQ16552 155 aa24.18■■□□□ 1.46
VRK2-201ENST00000340157 UBE2SQ16763 222 aa24.18■■□□□ 1.46
VRK2-201ENST00000340157 DLK2Q6UY11 383 aa24.18■■□□□ 1.46
VRK2-201ENST00000340157 USP49Q70CQ1 688 aa24.18■■□□□ 1.46
VRK2-201ENST00000340157 PCDHA1Q9Y5I3 950 aa24.18■■□□□ 1.46
VRK2-201ENST00000340157 SYKP43405 635 aa24.17■■□□□ 1.46
VRK2-201ENST00000340157 DGKZQ13574 1117 aa24.17■■□□□ 1.46
VRK2-201ENST00000340157 ZKSCAN4Q969J2 545 aaPredicted RBP24.17■■□□□ 1.46
VRK2-201ENST00000340157 FERMT2Q96AC1 680 aa24.17■■□□□ 1.46
VRK2-201ENST00000340157 L3MBTL3Q96JM7 780 aaPredicted RBP24.17■■□□□ 1.46
VRK2-201ENST00000340157 WRNIP1Q96S55 665 aa24.17■■□□□ 1.46
VRK2-201ENST00000340157 PARP14Q460N5 1801 aa24.16■■□□□ 1.46
VRK2-201ENST00000340157 GPR162Q16538 588 aa24.16■■□□□ 1.46
VRK2-201ENST00000340157 SCYL3Q8IZE3 742 aa24.16■■□□□ 1.46
VRK2-201ENST00000340157 TBCKQ8TEA7 893 aa24.16■■□□□ 1.46
VRK2-201ENST00000340157 CUL5Q93034 780 aa24.16■■□□□ 1.46
VRK2-201ENST00000340157 HOOK2Q96ED9 719 aa24.16■■□□□ 1.46
VRK2-201ENST00000340157 FEZ1Q99689 392 aa24.16■■□□□ 1.46
VRK2-201ENST00000340157 AMNQ9BXJ7 453 aa24.16■■□□□ 1.46
VRK2-201ENST00000340157 KIAA1683Q9H0B3 1180 aa24.16■■□□□ 1.46
VRK2-201ENST00000340157 TMEM60Q9H2L4 133 aa24.16■■□□□ 1.46
VRK2-201ENST00000340157 KCNH3Q9ULD8 1083 aa24.16■■□□□ 1.46
VRK2-201ENST00000340157 CTAGE5O15320 804 aa24.15■■□□□ 1.46
VRK2-201ENST00000340157 PLA2G6O60733 806 aa24.15■■□□□ 1.46
VRK2-201ENST00000340157 RNF214Q8ND24 703 aa24.15■■□□□ 1.46
VRK2-201ENST00000340157 PSTPIP2Q9H939 334 aa24.15■■□□□ 1.46
VRK2-201ENST00000340157 FBXO28Q9NVF7 368 aa24.15■■□□□ 1.46
VRK2-201ENST00000340157 OTOFQ9HC10 1997 aa24.15■■□□□ 1.46
VRK2-201ENST00000340157 TYRO3Q06418 890 aa24.15■■□□□ 1.46
VRK2-201ENST00000340157 NEK8Q86SG6 692 aa24.15■■□□□ 1.46
VRK2-201ENST00000340157 FBXO11Q86XK2 927 aa24.15■■□□□ 1.46
VRK2-201ENST00000340157 ERCC4Q92889 916 aaPredicted RBP24.15■■□□□ 1.46
VRK2-201ENST00000340157 KLRG1Q96E93 195 aa24.15■■□□□ 1.46
VRK2-201ENST00000340157 CCDC192P0DO97 292 aa24.14■■□□□ 1.45
VRK2-201ENST00000340157 TIGD1Q96MW7 591 aa24.14■■□□□ 1.45
VRK2-201ENST00000340157 VWA3AA6NCI4 1184 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 ADM5C9JUS6 153 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 OPLAHO14841 1288 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 MRPL12P52815 198 aaKnown RBP24.13■■□□□ 1.45
VRK2-201ENST00000340157 LETM2Q2VYF4 491 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 USH1GQ495M9 461 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 EPSTI1Q96J88 318 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 RANBP17Q9H2T7 1088 aaKnown RBP24.13■■□□□ 1.45
VRK2-201ENST00000340157 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.13■■□□□ 1.45
VRK2-201ENST00000340157 USP17L15C9J2P7 530 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms