RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CBX3Q13185 183 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 ANKRD1Q15327 319 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 ABTB1Q969K4 478 aaPredicted RBP10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 MTA3Q9BTC8 594 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 UNC45AQ9H3U1 944 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 ABCF3Q9NUQ8 709 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 CEP131Q9UPN4 1083 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 F8W031 263 aaPredicted RBP10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 HSP90AB4PQ58FF6 505 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 GKAP1Q5VSY0 366 aaPredicted RBP10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 TAX1BP1Q86VP1 789 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 CCNJLQ8IV13 435 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 EPHB4P54760 987 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 GUCY2DQ02846 1103 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 NR1I3Q14994 352 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 ODF2Q5BJF6 829 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 CCDC122Q5T0U0 273 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 MLKLQ8NB16 471 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 RUFY2Q8WXA3 655 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 FAM81BQ96LP2 452 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 ESF1Q9H501 851 aaKnown RBP10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 LRRC4CQ9HCJ2 640 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 CHMP2BQ9UQN3 213 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 RIMS2Q9UQ26 1411 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 C3P01024 1663 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 ADAMTSL3P82987 1691 aa10.68□□□□□ -0.7
PTCHD4-201ENST00000339488 A0A1W2PQ27 194 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 A0A1W2PQ64 194 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 A0A1W2PQD8 194 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 CCT8L1PA6NM43 557 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 NPTXRO95502 500 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 IDEP14735 1019 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 PLOD1Q02809 727 aaPredicted RBP10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 PPP1R42Q7Z4L9 355 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 ADAM22Q9P0K1 906 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 TUBE1Q9UJT0 475 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 TMEM98Q9Y2Y6 226 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 MYH8P13535 1937 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 MROH2AA6NES4 1674 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 RCCD1A6NED2 376 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 H0Y3Z8 333 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 SHBGP04278 402 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 ZNF18P17022 549 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 SERPINB4P48594 390 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 CUL4BQ13620 913 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 ZC2HC1CQ53FD0 456 aaPredicted RBP10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 C3orf67Q6ZVT6 689 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 LINS1Q8NG48 757 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 SPIRE2Q8WWL2 714 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 MAP4K1Q92918 833 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 CLIP3Q96DZ5 547 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 EDC3Q96F86 508 aaKnown RBP10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 CORO1BQ9BR76 489 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 STIM2Q9P246 746 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 GGA2Q9UJY4 613 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 PLAAQ9Y263 795 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 KIF28PB7ZC32 967 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 LSM1O15116 133 aaKnown RBP10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 FYB1O15117 783 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 NQO1P15559 274 aaKnown RBP10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 SARSP49591 514 aaKnown RBP10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 NAA16Q6N069 864 aaPredicted RBP10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 SMYD4Q8IYR2 804 aaPredicted RBP10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 MIPOL1Q8TD10 442 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 DHRS1Q96LJ7 313 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 NUP88Q99567 741 aaPredicted RBP10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 MTFR1LQ9H019 292 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 SEC31BQ9NQW1 1179 aa10.67□□□□□ -0.7
PTCHD4-201ENST00000339488 ZMYM6O95789 1325 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 GNA14O95837 355 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 CKAP4Q07065 602 aaKnown RBP10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 BTG3Q14201 252 aaPredicted RBP10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 SLMAPQ14BN4 828 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 TMEM132AQ24JP5 1023 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 HAUS3Q68CZ6 603 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 PI16Q6UXB8 463 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 CCDC129Q6ZRS4 1044 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 CCHCR1Q8TD31 782 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 ANKRD24Q8TF21 1146 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 LACRTQ9GZZ8 138 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 HELLSQ9NRZ9 838 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 UBAP1Q9NZ09 502 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 ATXN10Q9UBB4 475 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 TUBGCP4Q9UGJ1 667 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 CD2APQ9Y5K6 639 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 A0A1W2PP64 1363 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 A6NNZ2 444 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 UBOX5O94941 541 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 GSTT1P30711 240 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 HERVK_113P62684 666 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 PAK2Q13177 524 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 MKRN4PQ13434 485 aaPredicted RBP10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 TUBB8Q3ZCM7 444 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 NUTM2DQ5VT03 806 aaPredicted RBP10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 SHC4Q6S5L8 630 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 IQCKQ8N0W5 287 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 KCNMB3Q9NPA1 279 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 ETNK2Q9NVF9 386 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 MAN1B1Q9UKM7 699 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms