RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 GNRH1P01148 92 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 PSMC4P43686 418 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 SNAP25P60880 206 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 TKFCQ3LXA3 575 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 CCDC174Q6PII3 467 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 CPLX2Q6PUV4 134 aaKnown RBP13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 POTEEQ6S8J3 1075 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 NCAPG2Q86XI2 1143 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 RIOX2Q8IUF8 465 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 SHCBP1Q8NEM2 672 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 REPS2Q8NFH8 660 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 COA7Q96BR5 231 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 LARP6Q9BRS8 491 aaKnown RBP13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 MOV10L1Q9BXT6 1211 aaKnown RBP13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 RANBP17Q9H2T7 1088 aaKnown RBP13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 CPVLQ9H3G5 476 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 RIOX1Q9H6W3 641 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 JMJD4Q9H9V9 463 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 PRDM10Q9NQV6 1147 aa13.83□□□□□ -0.2
SPTLC1-202ENST00000337841 STRNO43815 780 aa13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 PEX10O60683 326 aa13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 ICAM1P05362 532 aa13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 WDR78Q5VTH9 848 aa13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 SNRNP48Q6IEG0 339 aaKnown RBP13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 SRBD1Q8N5C6 995 aaKnown RBP13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 CD99L2Q8TCZ2 262 aa13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 RRP36Q96EU6 259 aaKnown RBP13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 ZSCAN31Q96LW9 406 aaPredicted RBP13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 SPZ1Q9BXG8 430 aa13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 SLKQ9H2G2 1235 aaPredicted RBP13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 EFCC1Q9HA90 598 aa13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 ZNF214Q9UL59 606 aaPredicted RBP13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 LIMCH1Q9UPQ0 1083 aa13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 HPS5Q9UPZ3 1129 aa13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 IVNS1ABPQ9Y6Y0 642 aa13.82□□□□□ -0.2
SPTLC1-202ENST00000337841 LOC285556D6RIA3 1793 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 PNMA6FA0A0J9YX94 578 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 TNPO2O14787 897 aaKnown RBP13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 CPLX1O14810 134 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 ZBTB5O15062 677 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 ERCC3P19447 782 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 ADD1P35611 737 aaKnown RBP13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 MCM2P49736 904 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 CCT2P78371 535 aaKnown RBP13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 STK3Q13188 491 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 CDC37Q16543 378 aaPredicted RBP13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 TMTC3Q6ZXV5 915 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 PLEKHH3Q7Z736 793 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 FBXO11Q86XK2 927 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 CCDC82Q8N4S0 544 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 CHST13Q8NET6 341 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 AGBL1Q96MI9 1066 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 AMNQ9BXJ7 453 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 SEC63Q9UGP8 760 aaKnown RBP13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 FBXO40Q9UH90 709 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 CCPG1Q9ULG6 757 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 TPCN1Q9ULQ1 816 aa13.81□□□□□ -0.2
SPTLC1-202ENST00000337841 PFKFB2O60825 505 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 PLEKHA8P1O95397 391 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 ALAS1P13196 640 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 CDC27P30260 824 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 PRMT2P55345 433 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 AKAP17AQ02040 695 aaKnown RBP13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 QRICH1Q2TAL8 776 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 NOL8Q76FK4 1167 aaKnown RBP13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 NBPF11Q86T75 865 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 HOMER1Q86YM7 354 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 CMTR1Q8N1G2 835 aaKnown RBP13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 MTMR8Q96EF0 704 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 TRERF1Q96PN7 1200 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 PIGSQ96S52 555 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 PORCNQ9H237 461 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 FAM217BQ9NTX9 383 aaPredicted RBP13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 V9GY48 417 aaPredicted RBP13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 ZNF536O15090 1300 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 PTPRFP10586 1907 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 MYH4Q9Y623 1939 aa13.8□□□□□ -0.2
SPTLC1-202ENST00000337841 CYTH3O43739 400 aa13.79□□□□□ -0.2
SPTLC1-202ENST00000337841 FCER1AP12319 257 aa13.79□□□□□ -0.2
SPTLC1-202ENST00000337841 PTPREP23469 700 aa13.79□□□□□ -0.2
SPTLC1-202ENST00000337841 KCTD2Q14681 263 aa13.79□□□□□ -0.2
SPTLC1-202ENST00000337841 GPR142Q7Z601 462 aa13.79□□□□□ -0.2
SPTLC1-202ENST00000337841 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
SPTLC1-202ENST00000337841 TRIM47Q96LD4 638 aa13.79□□□□□ -0.2
SPTLC1-202ENST00000337841 RBM27Q9P2N5 1060 aaKnown RBP13.79□□□□□ -0.2
SPTLC1-202ENST00000337841 MRPL11Q9Y3B7 192 aaKnown RBP13.79□□□□□ -0.2
SPTLC1-202ENST00000337841 RIPK3Q9Y572 518 aa13.79□□□□□ -0.2
SPTLC1-202ENST00000337841 TRIM17Q9Y577 477 aa13.79□□□□□ -0.2
SPTLC1-202ENST00000337841 SLC15A5A6NIM6 579 aa13.78□□□□□ -0.2
SPTLC1-202ENST00000337841 CDKL5O76039 1030 aa13.78□□□□□ -0.2
SPTLC1-202ENST00000337841 IFNAR1P17181 557 aa13.78□□□□□ -0.2
SPTLC1-202ENST00000337841 SLC35G1Q2M3R5 365 aa13.78□□□□□ -0.2
SPTLC1-202ENST00000337841 CTU1Q7Z7A3 348 aaKnown RBP13.78□□□□□ -0.2
SPTLC1-202ENST00000337841 TRIM22Q8IYM9 498 aa13.78□□□□□ -0.2
SPTLC1-202ENST00000337841 ABRAQ8N0Z2 381 aa13.78□□□□□ -0.2
SPTLC1-202ENST00000337841 ANKRD35Q8N283 1001 aa13.78□□□□□ -0.2
SPTLC1-202ENST00000337841 DDX11Q96FC9 970 aa13.78□□□□□ -0.2
SPTLC1-202ENST00000337841 MMP19Q99542 508 aa13.78□□□□□ -0.2
SPTLC1-202ENST00000337841 NUDT12Q9BQG2 462 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms