RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 TTF2Q9UNY4 1162 aaKnown RBP9.2□□□□□ -0.94
HPS4-201ENST00000336873 PXDNLA1KZ92 1463 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 MST1RQ04912 1400 aa9.2□□□□□ -0.94
HPS4-201ENST00000336873 PLCG1P19174 1290 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 CYLC1P35663 651 aaPredicted RBP9.19□□□□□ -0.94
HPS4-201ENST00000336873 ST5P78524 1137 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 NONOQ15233 471 aaKnown RBP eCLIP9.19□□□□□ -0.94
HPS4-201ENST00000336873 MAATS1Q7Z4T9 603 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 KLHL7Q8IXQ5 586 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 REXO1Q8N1G1 1221 aaKnown RBP9.19□□□□□ -0.94
HPS4-201ENST00000336873 ZNF526Q8TF50 670 aaPredicted RBP9.19□□□□□ -0.94
HPS4-201ENST00000336873 JAKMIP2Q96AA8 810 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 SH2D3AQ9BRG2 576 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 TUBGCP2Q9BSJ2 902 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 OSBPL5Q9H0X9 879 aaPredicted RBP9.19□□□□□ -0.94
HPS4-201ENST00000336873 ALDH8A1Q9H2A2 487 aaPredicted RBP9.19□□□□□ -0.94
HPS4-201ENST00000336873 VEZTQ9HBM0 779 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 LAMA4Q16363 1823 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 SSR1P43307 286 aaKnown RBP9.19□□□□□ -0.94
HPS4-201ENST00000336873 LONRF2Q1L5Z9 754 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 CYP26C1Q6V0L0 522 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 SV2BQ7L1I2 683 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 CCDC155Q8N6L0 562 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 TC2NQ8N9U0 490 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 OR8K1Q8NGG5 319 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 ENOX1Q8TC92 643 aaKnown RBP9.19□□□□□ -0.94
HPS4-201ENST00000336873 STAG1Q8WVM7 1258 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 FERMT2Q96AC1 680 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 TIGD1Q96MW7 591 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 AGPAT5Q9NUQ2 364 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 TACC3Q9Y6A5 838 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 CHD2O14647 1828 aaKnown RBP9.19□□□□□ -0.94
HPS4-201ENST00000336873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.19□□□□□ -0.94
HPS4-201ENST00000336873 TMEM110-MUSTN1A8MSY1 372 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 ZNF185O15231 689 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 TAL1P17542 331 aaPredicted RBP9.19□□□□□ -0.94
HPS4-201ENST00000336873 GUCY2FP51841 1108 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 AMPD3Q01432 767 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 SPAG1Q07617 926 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 NKX1-1Q15270 411 aaPredicted RBP9.19□□□□□ -0.94
HPS4-201ENST00000336873 TXNRD1Q16881 649 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 NAA35Q5VZE5 725 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 TMC4Q7Z404 712 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 CNPY4Q8N129 248 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 HOMER2Q9NSB8 354 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 PCDHB13Q9Y5F0 798 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 DUSP10Q9Y6W6 482 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 RGPD2P0DJD1 1756 aa9.19□□□□□ -0.94
HPS4-201ENST00000336873 TTC26A0AVF1 554 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 UBE4AQ14139 1066 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 CALCRLQ16602 461 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 SGMS1Q86VZ5 419 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 USP17L15C9J2P7 530 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 USP17L13C9JLJ4 530 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 USP17L11C9JVI0 530 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 USP17L18D6R9N7 530 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 USP17L22D6RA61 530 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 USP17L17D6RBQ6 530 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 USP17L19D6RCP7 530 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 USP17L20D6RJB6 530 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 GDF11O95390 407 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 GNA11P29992 359 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 HPDP32754 393 aaPredicted RBP9.18□□□□□ -0.94
HPS4-201ENST00000336873 USP17L24Q0WX57 530 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 TRIM28Q13263 835 aaKnown RBP9.18□□□□□ -0.94
HPS4-201ENST00000336873 USP17L6PQ6QN14 398 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 RBM43Q6ZSC3 357 aaKnown RBP9.18□□□□□ -0.94
HPS4-201ENST00000336873 TMTC3Q6ZXV5 915 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 MAP3K14Q99558 947 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 TSG101Q99816 390 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 ABCB6Q9NP58 842 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 FBXO3Q9UK99 471 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 USP17L5A8MUK1 530 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 ADAMTS3O15072 1205 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 BMP15O95972 392 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 CFBP00751 764 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 ATP1A2P50993 1020 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 RASSF7Q02833 373 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 MKRN4PQ13434 485 aaPredicted RBP9.18□□□□□ -0.94
HPS4-201ENST00000336873 NYAP1Q6ZVC0 841 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 SND1Q7KZF4 910 aaKnown RBP eCLIP9.18□□□□□ -0.94
HPS4-201ENST00000336873 CPXCR1Q8N123 301 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 RAB34Q9BZG1 259 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 GGA1Q9UJY5 639 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 PACSIN2Q9UNF0 486 aaPredicted RBP9.18□□□□□ -0.94
HPS4-201ENST00000336873 FAN1Q9Y2M0 1017 aa9.18□□□□□ -0.94
HPS4-201ENST00000336873 EFCAB8A8MWE9 144 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 N4BP1O75113 896 aaKnown RBP9.17□□□□□ -0.94
HPS4-201ENST00000336873 SLC1A4P43007 532 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 MAGEA1P43355 309 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 C2orf54Q08AI8 447 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 TERF2Q15554 542 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 GRIK5Q16478 980 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 ZNF34Q8IZ26 560 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 CEP112Q8N8E3 955 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 UHMK1Q8TAS1 419 aaKnown RBP9.17□□□□□ -0.94
HPS4-201ENST00000336873 TAF4BQ92750 862 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 CNOT6LQ96LI5 555 aaKnown RBP9.17□□□□□ -0.94
HPS4-201ENST00000336873 TMEM47Q9BQJ4 181 aa9.17□□□□□ -0.94
HPS4-201ENST00000336873 AGXT2Q9BYV1 514 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms