RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 CDC37Q16543 378 aaPredicted RBP16.34■□□□□ 0.21
APOBEC3B-202ENST00000335760 FAM110CQ1W6H9 321 aa16.34■□□□□ 0.21
APOBEC3B-202ENST00000335760 Q3C1V9 767 aa16.34■□□□□ 0.21
APOBEC3B-202ENST00000335760 HOMER1Q86YM7 354 aa16.34■□□□□ 0.21
APOBEC3B-202ENST00000335760 CPLX1O14810 134 aa16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 SLC4A3P48751 1232 aa16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 OAZ1P54368 228 aa16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 FUT2Q10981 343 aa16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 QRICH1Q2TAL8 776 aa16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 CPLX2Q6PUV4 134 aaKnown RBP16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 GTF3C6Q969F1 213 aa16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 MTMR8Q96EF0 704 aa16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 RRP36Q96EU6 259 aaKnown RBP16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 AGBL1Q96MI9 1066 aa16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 PIGSQ96S52 555 aa16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 SPATC1LQ9H0A9 340 aa16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 SH2B1Q9NRF2 756 aaPredicted RBP16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 ZNF214Q9UL59 606 aaPredicted RBP16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 ZNF536O15090 1300 aa16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 CNTNAP5Q8WYK1 1306 aa16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 PCNTO95613 3336 aa16.33■□□□□ 0.2
APOBEC3B-202ENST00000335760 GPR25O00155 361 aa16.32■□□□□ 0.2
APOBEC3B-202ENST00000335760 ATP2A1O14983 1001 aa16.32■□□□□ 0.2
APOBEC3B-202ENST00000335760 ICAM1P05362 532 aa16.32■□□□□ 0.2
APOBEC3B-202ENST00000335760 HSPA1AP0DMV8 641 aaKnown RBP16.32■□□□□ 0.2
APOBEC3B-202ENST00000335760 HSPA1BP0DMV9 641 aaKnown RBP16.32■□□□□ 0.2
APOBEC3B-202ENST00000335760 STAT3P40763 770 aa16.32■□□□□ 0.2
APOBEC3B-202ENST00000335760 NTRK3Q16288 839 aa16.32■□□□□ 0.2
APOBEC3B-202ENST00000335760 SNRNP48Q6IEG0 339 aaKnown RBP16.32■□□□□ 0.2
APOBEC3B-202ENST00000335760 CCDC83Q8IWF9 413 aa16.32■□□□□ 0.2
APOBEC3B-202ENST00000335760 TEX13BQ9BXU2 312 aa16.32■□□□□ 0.2
APOBEC3B-202ENST00000335760 SEC63Q9UGP8 760 aaKnown RBP16.32■□□□□ 0.2
APOBEC3B-202ENST00000335760 V9GY48 417 aaPredicted RBP16.32■□□□□ 0.2
APOBEC3B-202ENST00000335760 BAZ2BQ9UIF8 2168 aaKnown RBP16.32■□□□□ 0.2
APOBEC3B-202ENST00000335760 PNMA6FA0A0J9YX94 578 aa16.31■□□□□ 0.2
APOBEC3B-202ENST00000335760 hCG_1642624A0A1W2PR95 340 aa16.31■□□□□ 0.2
APOBEC3B-202ENST00000335760 ZBTB5O15062 677 aa16.31■□□□□ 0.2
APOBEC3B-202ENST00000335760 PPFIA3O75145 1194 aa16.31■□□□□ 0.2
APOBEC3B-202ENST00000335760 ECM2O94769 699 aaPredicted RBP16.31■□□□□ 0.2
APOBEC3B-202ENST00000335760 IFNAR1P17181 557 aa16.31■□□□□ 0.2
APOBEC3B-202ENST00000335760 TAL1P17542 331 aaPredicted RBP16.31■□□□□ 0.2
APOBEC3B-202ENST00000335760 CCNA1P78396 465 aa16.31■□□□□ 0.2
APOBEC3B-202ENST00000335760 SP3Q02447 781 aa16.31■□□□□ 0.2
APOBEC3B-202ENST00000335760 PHKBQ93100 1093 aa16.31■□□□□ 0.2
APOBEC3B-202ENST00000335760 TMX3Q96JJ7 454 aa16.31■□□□□ 0.2
APOBEC3B-202ENST00000335760 MOV10L1Q9BXT6 1211 aaKnown RBP16.31■□□□□ 0.2
APOBEC3B-202ENST00000335760 CCPG1Q9ULG6 757 aa16.31■□□□□ 0.2
APOBEC3B-202ENST00000335760 FOXN1O15353 648 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 CDKL5O76039 1030 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 SLC25A27O95847 323 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 ALAS1P13196 640 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 AKAP17AQ02040 695 aaKnown RBP16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 SSRP1Q08945 709 aaKnown RBP16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 ST3GAL1Q11201 340 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 USH1GQ495M9 461 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 NCAPG2Q86XI2 1143 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 FBXO11Q86XK2 927 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 RIOX2Q8IUF8 465 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 CCAR1Q8IX12 1150 aaKnown RBP16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 AMNQ9BXJ7 453 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 SLC26A6Q9BXS9 759 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 PORCNQ9H237 461 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 EFCC1Q9HA90 598 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 RIPK3Q9Y572 518 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 MYH6P13533 1939 aa16.3■□□□□ 0.2
APOBEC3B-202ENST00000335760 PPP1R11O60927 126 aaPredicted RBP16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 DTNBO60941 627 aa16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 FKTNO75072 461 aa16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 CTDNEP1O95476 244 aa16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 ERCC3P19447 782 aa16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 LACTBP83111 547 aaPredicted RBP16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 WDR78Q5VTH9 848 aa16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 SHCBP1Q8NEM2 672 aa16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 ZNF296Q8WUU4 475 aaPredicted RBP16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 SNX21Q969T3 373 aa16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 RNF26Q9BY78 433 aaPredicted RBP16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 CWC22Q9HCG8 908 aaKnown RBP16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 HOMER2Q9NSB8 354 aa16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 PNMA2Q9UL42 364 aa16.29■□□□□ 0.2
APOBEC3B-202ENST00000335760 PRPF3O43395 683 aaKnown RBP16.28■□□□□ 0.2
APOBEC3B-202ENST00000335760 FMNL1O95466 1100 aaPredicted RBP16.28■□□□□ 0.2
APOBEC3B-202ENST00000335760 HSPA8P11142 646 aaKnown RBP16.28■□□□□ 0.2
APOBEC3B-202ENST00000335760 COPB2P35606 906 aa16.28■□□□□ 0.2
APOBEC3B-202ENST00000335760 KIF22Q14807 665 aa16.28■□□□□ 0.2
APOBEC3B-202ENST00000335760 TKFCQ3LXA3 575 aa16.28■□□□□ 0.2
APOBEC3B-202ENST00000335760 TRIM22Q8IYM9 498 aa16.28■□□□□ 0.2
APOBEC3B-202ENST00000335760 CD99L2Q8TCZ2 262 aa16.28■□□□□ 0.2
APOBEC3B-202ENST00000335760 TRERF1Q96PN7 1200 aa16.28■□□□□ 0.2
APOBEC3B-202ENST00000335760 MROH8Q9H579 483 aa16.28■□□□□ 0.2
APOBEC3B-202ENST00000335760 RNF146Q9NTX7 359 aa16.28■□□□□ 0.2
APOBEC3B-202ENST00000335760 RBM27Q9P2N5 1060 aaKnown RBP16.28■□□□□ 0.2
APOBEC3B-202ENST00000335760 ABCB11O95342 1321 aa16.28■□□□□ 0.2
APOBEC3B-202ENST00000335760 K7ELQ4 463 aaPredicted RBP16.27■□□□□ 0.2
APOBEC3B-202ENST00000335760 MAPK4P31152 587 aa16.27■□□□□ 0.2
APOBEC3B-202ENST00000335760 PSMC4P43686 418 aa16.27■□□□□ 0.2
APOBEC3B-202ENST00000335760 CTCFP49711 727 aaPredicted RBP16.27■□□□□ 0.2
APOBEC3B-202ENST00000335760 HSCBQ8IWL3 235 aa16.27■□□□□ 0.2
APOBEC3B-202ENST00000335760 NSUN7Q8NE18 718 aaKnown RBP16.27■□□□□ 0.2
APOBEC3B-202ENST00000335760 COA7Q96BR5 231 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms