RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 HOXA7P31268 230 aaPredicted RBP19.12■□□□□ 0.65
SHOX-201ENST00000334060 NBR1Q14596 966 aa19.12■□□□□ 0.65
SHOX-201ENST00000334060 HEATR3Q7Z4Q2 680 aa19.12■□□□□ 0.65
SHOX-201ENST00000334060 TBC1D5Q92609 795 aa19.12■□□□□ 0.65
SHOX-201ENST00000334060 HHIPL1Q96JK4 782 aa19.12■□□□□ 0.65
SHOX-201ENST00000334060 PAGR1Q9BTK6 254 aa19.12■□□□□ 0.65
SHOX-201ENST00000334060 RANBP17Q9H2T7 1088 aaKnown RBP19.12■□□□□ 0.65
SHOX-201ENST00000334060 WDR33Q9C0J8 1336 aaKnown RBP19.11■□□□□ 0.65
SHOX-201ENST00000334060 CCDC196A0A1B0GTZ2 297 aa19.11■□□□□ 0.65
SHOX-201ENST00000334060 OPLAHO14841 1288 aa19.11■□□□□ 0.65
SHOX-201ENST00000334060 HERVK_113P62684 666 aa19.11■□□□□ 0.65
SHOX-201ENST00000334060 COG2Q14746 738 aa19.11■□□□□ 0.65
SHOX-201ENST00000334060 FASTKD5Q7L8L6 764 aaKnown RBP19.11■□□□□ 0.65
SHOX-201ENST00000334060 IFNL1Q8IU54 200 aa19.11■□□□□ 0.65
SHOX-201ENST00000334060 PRPF38AQ8NAV1 312 aaKnown RBP19.11■□□□□ 0.65
SHOX-201ENST00000334060 CCDC102AQ96A19 550 aa19.11■□□□□ 0.65
SHOX-201ENST00000334060 ALG1Q9BT22 464 aa19.11■□□□□ 0.65
SHOX-201ENST00000334060 RNF26Q9BY78 433 aaPredicted RBP19.11■□□□□ 0.65
SHOX-201ENST00000334060 HOMER2Q9NSB8 354 aa19.11■□□□□ 0.65
SHOX-201ENST00000334060 RBPJLQ9UBG7 517 aa19.11■□□□□ 0.65
SHOX-201ENST00000334060 A0A0G2JMZ2 1700 aa19.11■□□□□ 0.65
SHOX-201ENST00000334060 HTTP42858 3142 aa19.1■□□□□ 0.65
SHOX-201ENST00000334060 ZBTB5O15062 677 aa19.1■□□□□ 0.65
SHOX-201ENST00000334060 IRX3P78415 501 aaPredicted RBP19.1■□□□□ 0.65
SHOX-201ENST00000334060 SLC38A10Q9HBR0 1119 aa19.1■□□□□ 0.65
SHOX-201ENST00000334060 ZNF214Q9UL59 606 aaPredicted RBP19.1■□□□□ 0.65
SHOX-201ENST00000334060 ADAMTS5Q9UNA0 930 aa19.1■□□□□ 0.65
SHOX-201ENST00000334060 STXBP3O00186 592 aa19.1■□□□□ 0.65
SHOX-201ENST00000334060 DDIT3P35638 169 aa19.1■□□□□ 0.65
SHOX-201ENST00000334060 NPY5RQ15761 445 aa19.1■□□□□ 0.65
SHOX-201ENST00000334060 PFKFB3Q16875 520 aaPredicted RBP19.1■□□□□ 0.65
SHOX-201ENST00000334060 OXER1Q8TDS5 423 aa19.1■□□□□ 0.65
SHOX-201ENST00000334060 RRP36Q96EU6 259 aaKnown RBP19.1■□□□□ 0.65
SHOX-201ENST00000334060 INTS4Q96HW7 963 aaKnown RBP19.1■□□□□ 0.65
SHOX-201ENST00000334060 LLPHQ9BRT6 129 aaKnown RBP19.1■□□□□ 0.65
SHOX-201ENST00000334060 SCG2P13521 617 aa19.09■□□□□ 0.65
SHOX-201ENST00000334060 HSPA6P17066 643 aa19.09■□□□□ 0.65
SHOX-201ENST00000334060 GNAQP50148 359 aa19.09■□□□□ 0.65
SHOX-201ENST00000334060 CAP1Q01518 475 aa19.09■□□□□ 0.65
SHOX-201ENST00000334060 MUM1L1Q5H9M0 696 aa19.09■□□□□ 0.65
SHOX-201ENST00000334060 ANKRD23Q86SG2 305 aa19.09■□□□□ 0.65
SHOX-201ENST00000334060 RASGRP4Q8TDF6 673 aa19.09■□□□□ 0.65
SHOX-201ENST00000334060 CHURC1Q8WUH1 139 aa19.09■□□□□ 0.65
SHOX-201ENST00000334060 CPA4Q9UI42 421 aa19.09■□□□□ 0.65
SHOX-201ENST00000334060 ZDHHC9Q9Y397 364 aa19.09■□□□□ 0.65
SHOX-201ENST00000334060 DDX49Q9Y6V7 483 aaKnown RBP19.09■□□□□ 0.65
SHOX-201ENST00000334060 MANSC4A6NHS7 340 aaPredicted RBP19.08■□□□□ 0.65
SHOX-201ENST00000334060 PLS1Q14651 629 aa19.08■□□□□ 0.65
SHOX-201ENST00000334060 FAM160B2Q86V87 743 aa19.08■□□□□ 0.65
SHOX-201ENST00000334060 ANKRD13CQ8N6S4 541 aa19.08■□□□□ 0.65
SHOX-201ENST00000334060 PURBQ96QR8 312 aaKnown RBP19.08■□□□□ 0.65
SHOX-201ENST00000334060 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.08■□□□□ 0.65
SHOX-201ENST00000334060 ZSWIM8A7E2V4 1837 aa19.08■□□□□ 0.64
SHOX-201ENST00000334060 STK36Q9NRP7 1315 aa19.08■□□□□ 0.64
SHOX-201ENST00000334060 PNMA6FA0A0J9YX94 578 aa19.08■□□□□ 0.64
SHOX-201ENST00000334060 FAM205CA6NFA0 338 aa19.08■□□□□ 0.64
SHOX-201ENST00000334060 KIF28PB7ZC32 967 aa19.08■□□□□ 0.64
SHOX-201ENST00000334060 PLA2G6O60733 806 aa19.08■□□□□ 0.64
SHOX-201ENST00000334060 SYT1P21579 422 aa19.08■□□□□ 0.64
SHOX-201ENST00000334060 LBX2Q6XYB7 198 aa19.08■□□□□ 0.64
SHOX-201ENST00000334060 NFIBO00712 420 aa19.07■□□□□ 0.64
SHOX-201ENST00000334060 DEXIO95424 95 aa19.07■□□□□ 0.64
SHOX-201ENST00000334060 CRHR2Q13324 411 aa19.07■□□□□ 0.64
SHOX-201ENST00000334060 PPP2R5BQ15173 497 aa19.07■□□□□ 0.64
SHOX-201ENST00000334060 EARS2Q5JPH6 523 aaKnown RBP19.07■□□□□ 0.64
SHOX-201ENST00000334060 TRIM22Q8IYM9 498 aa19.07■□□□□ 0.64
SHOX-201ENST00000334060 PGBD1Q96JS3 809 aa19.07■□□□□ 0.64
SHOX-201ENST00000334060 LZTS2Q9BRK4 669 aa19.07■□□□□ 0.64
SHOX-201ENST00000334060 BRCA2P51587 3418 aa19.07■□□□□ 0.64
SHOX-201ENST00000334060 UBE2SQ16763 222 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 KRT40Q6A162 431 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 CPLX2Q6PUV4 134 aaKnown RBP19.06■□□□□ 0.64
SHOX-201ENST00000334060 FERMT3Q86UX7 667 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 FAM184AQ8NB25 1140 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 PORCNQ9H237 461 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 PCDHA1Q9Y5I3 950 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 ADGRA2Q96PE1 1338 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 CDKL5O76039 1030 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 TM4SF4P48230 202 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 NOGQ13253 232 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 TAF1CQ15572 869 aaPredicted RBP19.06■□□□□ 0.64
SHOX-201ENST00000334060 SNRNP48Q6IEG0 339 aaKnown RBP19.06■□□□□ 0.64
SHOX-201ENST00000334060 FAM173BQ6P4H8 233 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 SMCR8Q8TEV9 937 aaPredicted RBP19.06■□□□□ 0.64
SHOX-201ENST00000334060 TMEM260Q9NX78 707 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 TSKSQ9UJT2 592 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 CCPG1Q9ULG6 757 aa19.06■□□□□ 0.64
SHOX-201ENST00000334060 TBC1D8O95759 1140 aa19.05■□□□□ 0.64
SHOX-201ENST00000334060 ALAS1P13196 640 aa19.05■□□□□ 0.64
SHOX-201ENST00000334060 SMARCA1P28370 1054 aa19.05■□□□□ 0.64
SHOX-201ENST00000334060 NR5A1Q13285 461 aa19.05■□□□□ 0.64
SHOX-201ENST00000334060 FOXD4L6Q3SYB3 417 aaPredicted RBP19.05■□□□□ 0.64
SHOX-201ENST00000334060 LARP1BQ659C4 914 aaKnown RBP19.05■□□□□ 0.64
SHOX-201ENST00000334060 FOXD4L3Q6VB84 417 aaPredicted RBP19.05■□□□□ 0.64
SHOX-201ENST00000334060 FBXO11Q86XK2 927 aa19.05■□□□□ 0.64
SHOX-201ENST00000334060 BARHL2Q9NY43 387 aa19.05■□□□□ 0.64
SHOX-201ENST00000334060 SEC63Q9UGP8 760 aaKnown RBP19.05■□□□□ 0.64
SHOX-201ENST00000334060 VPS37CA5D8V6 355 aaPredicted RBP19.04■□□□□ 0.64
SHOX-201ENST00000334060 ICAM1P05362 532 aa19.04■□□□□ 0.64
SHOX-201ENST00000334060 HOXA13P31271 388 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms