RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 KRT28Q7Z3Y7 464 aa12.59□□□□□ -0.39
GINS3-202ENST00000328514 SECISBP2LQ93073 1101 aaKnown RBP12.59□□□□□ -0.39
GINS3-202ENST00000328514 CABS1Q96KC9 395 aa12.59□□□□□ -0.39
GINS3-202ENST00000328514 GDAP1L1Q96MZ0 367 aa12.59□□□□□ -0.39
GINS3-202ENST00000328514 NACAP1Q9BZK3 213 aa12.59□□□□□ -0.39
GINS3-202ENST00000328514 CXorf56Q9H5V9 222 aa12.59□□□□□ -0.39
GINS3-202ENST00000328514 NHEJ1Q9H9Q4 299 aaPredicted RBP12.59□□□□□ -0.39
GINS3-202ENST00000328514 ZNHIT6Q9NWK9 470 aaKnown RBP12.59□□□□□ -0.39
GINS3-202ENST00000328514 VPS54Q9P1Q0 977 aa12.59□□□□□ -0.39
GINS3-202ENST00000328514 BCORQ6W2J9 1755 aa12.59□□□□□ -0.39
GINS3-202ENST00000328514 WNT7AO00755 349 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 ZNF185O15231 689 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 MEFVO15553 781 aaPredicted RBP12.58□□□□□ -0.39
GINS3-202ENST00000328514 MBD4O95243 580 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 LCA5LO95447 670 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 TCP1P17987 556 aaKnown RBP12.58□□□□□ -0.39
GINS3-202ENST00000328514 PSEN1P49768 467 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 MNAT1P51948 309 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 KIF5AQ12840 1032 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 MAP3K12Q12852 859 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 PLCB4Q15147 1175 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 TTMPQ5BVD1 217 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 FBXW10Q5XX13 1052 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 LDHAL6AQ6ZMR3 332 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 KDM7AQ6ZMT4 941 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 SPATA4Q8NEY3 305 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 BLZF1Q9H2G9 400 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 STIM2Q9P246 746 aa12.58□□□□□ -0.39
GINS3-202ENST00000328514 DMGDHQ9UI17 866 aaKnown RBP12.58□□□□□ -0.39
GINS3-202ENST00000328514 KIF1CO43896 1103 aaKnown RBP12.58□□□□□ -0.4
GINS3-202ENST00000328514 LONP1P36776 959 aaKnown RBP12.58□□□□□ -0.4
GINS3-202ENST00000328514 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
GINS3-202ENST00000328514 C2orf54Q08AI8 447 aa12.58□□□□□ -0.4
GINS3-202ENST00000328514 MICALCLQ6ZW33 695 aa12.58□□□□□ -0.4
GINS3-202ENST00000328514 CD302Q8IX05 232 aa12.58□□□□□ -0.4
GINS3-202ENST00000328514 CMTR1Q8N1G2 835 aaKnown RBP12.58□□□□□ -0.4
GINS3-202ENST00000328514 MREGQ8N565 214 aa12.58□□□□□ -0.4
GINS3-202ENST00000328514 CCDC155Q8N6L0 562 aa12.58□□□□□ -0.4
GINS3-202ENST00000328514 EHD4Q9H223 541 aa12.58□□□□□ -0.4
GINS3-202ENST00000328514 JADE2Q9NQC1 790 aa12.58□□□□□ -0.4
GINS3-202ENST00000328514 RBM28Q9NW13 759 aaKnown RBP12.58□□□□□ -0.4
GINS3-202ENST00000328514 ANAPC4Q9UJX5 808 aa12.58□□□□□ -0.4
GINS3-202ENST00000328514 SPATA31A3Q5VYP0 1347 aa12.57□□□□□ -0.4
GINS3-202ENST00000328514 MYH2Q9UKX2 1941 aa12.57□□□□□ -0.4
GINS3-202ENST00000328514 RASSF10A6NK89 507 aa12.57□□□□□ -0.4
GINS3-202ENST00000328514 NDUFAB1O14561 156 aa12.57□□□□□ -0.4
GINS3-202ENST00000328514 FGFR2P21802 821 aa12.57□□□□□ -0.4
GINS3-202ENST00000328514 PHKA1P46020 1223 aa12.57□□□□□ -0.4
GINS3-202ENST00000328514 ZNF174Q15697 407 aa12.57□□□□□ -0.4
GINS3-202ENST00000328514 ZSCAN29Q8IWY8 852 aaPredicted RBP12.57□□□□□ -0.4
GINS3-202ENST00000328514 IQCKQ8N0W5 287 aa12.57□□□□□ -0.4
GINS3-202ENST00000328514 CCDC82Q8N4S0 544 aa12.57□□□□□ -0.4
GINS3-202ENST00000328514 LRRC1Q9BTT6 524 aa12.57□□□□□ -0.4
GINS3-202ENST00000328514 EXOC1Q9NV70 894 aa12.57□□□□□ -0.4
GINS3-202ENST00000328514 TFR2Q9UP52 801 aa12.57□□□□□ -0.4
GINS3-202ENST00000328514 LRP5O75197 1615 aa12.57□□□□□ -0.4
GINS3-202ENST00000328514 C21orf2O43822 256 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 HSF2BPO75031 334 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 COBLO75128 1261 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 TACC1O75410 805 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 ITGA6P23229 1130 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 ZC3H6P61129 1189 aaKnown RBP12.56□□□□□ -0.4
GINS3-202ENST00000328514 SETQ01105 290 aaPredicted RBP12.56□□□□□ -0.4
GINS3-202ENST00000328514 DRP2Q13474 957 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 IL17AQ16552 155 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 TTI2Q6NXR4 508 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 LMOD2Q6P5Q4 547 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 GIMAP8Q8ND71 665 aaPredicted RBP12.56□□□□□ -0.4
GINS3-202ENST00000328514 HDAC7Q8WUI4 952 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 LPIN2Q92539 896 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 STAMQ92783 540 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 ARL8AQ96BM9 186 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 RRP36Q96EU6 259 aaKnown RBP12.56□□□□□ -0.4
GINS3-202ENST00000328514 ERGIC2Q96RQ1 377 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 UBAC1Q9BSL1 405 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 EPN3Q9H201 632 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 SH2D4AQ9H788 454 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 DONSONQ9NYP3 566 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 RNF14Q9UBS8 474 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 GDAQ9Y2T3 454 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 PLCH1Q4KWH8 1693 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 ANKRD18BA2A2Z9 1011 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 PSMA7O14818 248 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 USO1O60763 962 aaKnown RBP12.56□□□□□ -0.4
GINS3-202ENST00000328514 KIAA0754O94854 1291 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 RHOBTB3O94955 611 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 CCDC172P0C7W6 258 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 GPTP24298 496 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 PUM3Q15397 648 aaKnown RBP12.56□□□□□ -0.4
GINS3-202ENST00000328514 HAUS3Q68CZ6 603 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 OTUD6BQ8N6M0 293 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 MAGEB6Q8N7X4 407 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 SPATA5Q8NB90 893 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 TSEN2Q8NCE0 465 aaKnown RBP12.56□□□□□ -0.4
GINS3-202ENST00000328514 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 FAM89AQ96GI7 184 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 DHTKD1Q96HY7 919 aaPredicted RBP12.56□□□□□ -0.4
GINS3-202ENST00000328514 ZKSCAN3Q9BRR0 538 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 ARMT1Q9H993 441 aa12.56□□□□□ -0.4
GINS3-202ENST00000328514 AGPAT5Q9NUQ2 364 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms