RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 PCDHA5Q9Y5H7 936 aa17■□□□□ 0.31
TPM3-205ENST00000328159 ZBTB5O15062 677 aa16.99■□□□□ 0.31
TPM3-205ENST00000328159 PPP1R11O60927 126 aaPredicted RBP16.99■□□□□ 0.31
TPM3-205ENST00000328159 TNIP1Q15025 636 aa16.99■□□□□ 0.31
TPM3-205ENST00000328159 DHX58Q96C10 678 aa16.99■□□□□ 0.31
TPM3-205ENST00000328159 BIN2Q9UBW5 565 aaPredicted RBP16.99■□□□□ 0.31
TPM3-205ENST00000328159 BCS1LQ9Y276 419 aa16.99■□□□□ 0.31
TPM3-205ENST00000328159 F5H6K3 240 aa16.98■□□□□ 0.31
TPM3-205ENST00000328159 MYO1BO43795 1136 aa16.98■□□□□ 0.31
TPM3-205ENST00000328159 LONP1P36776 959 aaKnown RBP16.98■□□□□ 0.31
TPM3-205ENST00000328159 ZNF75DP51815 510 aa16.98■□□□□ 0.31
TPM3-205ENST00000328159 KLRC3Q07444 240 aa16.98■□□□□ 0.31
TPM3-205ENST00000328159 JAKMIP3Q5VZ66 844 aa16.98■□□□□ 0.31
TPM3-205ENST00000328159 ISM2Q6H9L7 571 aa16.98■□□□□ 0.31
TPM3-205ENST00000328159 FAM83AQ86UY5 434 aa16.98■□□□□ 0.31
TPM3-205ENST00000328159 CCDC34Q96HJ3 373 aa16.98■□□□□ 0.31
TPM3-205ENST00000328159 TRIM5Q9C035 493 aa16.98■□□□□ 0.31
TPM3-205ENST00000328159 LAD1O00515 517 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 SLFN14P0C7P3 912 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 PRR29P0C7W0 189 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 SARM1Q6SZW1 724 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 NEK8Q86SG6 692 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 PLA2G4DQ86XP0 818 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 GMCL1Q96IK5 515 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 TMEM60Q9H2L4 133 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 MYOZ2Q9NPC6 264 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 RIC8AQ9NPQ8 531 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 TMEM260Q9NX78 707 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 LTBP3Q9NS15 1303 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 NT5DC1Q5TFE4 455 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 DTHD1Q6ZMT9 781 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 SH3RF1Q7Z6J0 888 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 GRAMD1CQ8IYS0 662 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 SMARCE1Q969G3 411 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 SYNPO2Q9UMS6 1093 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 ZKSCAN5Q9Y2L8 839 aa16.97■□□□□ 0.31
TPM3-205ENST00000328159 SHTN1A0MZ66 631 aa16.96■□□□□ 0.31
TPM3-205ENST00000328159 WNT10BO00744 389 aa16.96■□□□□ 0.31
TPM3-205ENST00000328159 TBC1D12O60347 775 aa16.96■□□□□ 0.31
TPM3-205ENST00000328159 NDUFB10O96000 172 aa16.96■□□□□ 0.31
TPM3-205ENST00000328159 PRPHP41219 470 aa16.96■□□□□ 0.31
TPM3-205ENST00000328159 MMP14P50281 582 aa16.96■□□□□ 0.31
TPM3-205ENST00000328159 ORC2Q13416 577 aaPredicted RBP16.96■□□□□ 0.31
TPM3-205ENST00000328159 LETM2Q2VYF4 491 aa16.96■□□□□ 0.31
TPM3-205ENST00000328159 NBPF9Q3BBW0 867 aa16.96■□□□□ 0.31
TPM3-205ENST00000328159 TBCKQ8TEA7 893 aa16.96■□□□□ 0.31
TPM3-205ENST00000328159 PYM1Q9BRP8 204 aaKnown RBP16.96■□□□□ 0.31
TPM3-205ENST00000328159 TMEM39BQ9GZU3 492 aa16.96■□□□□ 0.31
TPM3-205ENST00000328159 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.96■□□□□ 0.31
TPM3-205ENST00000328159 MAN1B1Q9UKM7 699 aa16.96■□□□□ 0.31
TPM3-205ENST00000328159 SMTNL1A8MU46 457 aa16.95■□□□□ 0.3
TPM3-205ENST00000328159 CCNT1O60563 726 aaKnown RBP16.95■□□□□ 0.3
TPM3-205ENST00000328159 RPS12P25398 132 aaKnown RBP16.95■□□□□ 0.3
TPM3-205ENST00000328159 MSNP26038 577 aaKnown RBP16.95■□□□□ 0.3
TPM3-205ENST00000328159 SARSP49591 514 aaKnown RBP16.95■□□□□ 0.3
TPM3-205ENST00000328159 QRICH1Q2TAL8 776 aa16.95■□□□□ 0.3
TPM3-205ENST00000328159 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.95■□□□□ 0.3
TPM3-205ENST00000328159 PAGE5Q96GU1 130 aa16.95■□□□□ 0.3
TPM3-205ENST00000328159 A0A1W2PRG0 241 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 TXLNAP40222 546 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 PTGER2P43116 358 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 ZNF280AP59817 542 aaPredicted RBP16.94■□□□□ 0.3
TPM3-205ENST00000328159 E2F4Q16254 413 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 CDC37Q16543 378 aaPredicted RBP16.94■□□□□ 0.3
TPM3-205ENST00000328159 CDAN1Q8IWY9 1227 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 IQUBQ8NA54 791 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 SPC24Q8NBT2 197 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 CUL5Q93034 780 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 NUP88Q99567 741 aaPredicted RBP16.94■□□□□ 0.3
TPM3-205ENST00000328159 ARHGEF10LQ9HCE6 1279 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 PGAP2Q9UHJ9 254 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 ZBTB21Q9ULJ3 1066 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 PSDA5PKW4 1024 aaPredicted RBP16.94■□□□□ 0.3
TPM3-205ENST00000328159 GOLGA6L6A8MZA4 724 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 IKBKBO14920 756 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 SMC2O95347 1197 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 OR52Z1P0C646 297 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 BMP3P12645 472 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 CDC25BP30305 580 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 CLCN1P35523 988 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 MRPL12P52815 198 aaKnown RBP16.94■□□□□ 0.3
TPM3-205ENST00000328159 RASSF7Q02833 373 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 TRIML1Q8N9V2 468 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 SPATA20Q8TB22 786 aa16.94■□□□□ 0.3
TPM3-205ENST00000328159 NEMFO60524 1076 aa16.93■□□□□ 0.3
TPM3-205ENST00000328159 BMP6P22004 513 aa16.93■□□□□ 0.3
TPM3-205ENST00000328159 AFMP43652 599 aa16.93■□□□□ 0.3
TPM3-205ENST00000328159 TNNI2P48788 182 aa16.93■□□□□ 0.3
TPM3-205ENST00000328159 CLK2P49760 499 aaKnown RBP16.93■□□□□ 0.3
TPM3-205ENST00000328159 TPM4P67936 248 aa16.93■□□□□ 0.3
TPM3-205ENST00000328159 MORC3Q14149 939 aa16.93■□□□□ 0.3
TPM3-205ENST00000328159 NCAPHQ15003 741 aa16.93■□□□□ 0.3
TPM3-205ENST00000328159 UBE2SQ16763 222 aa16.93■□□□□ 0.3
TPM3-205ENST00000328159 SYDE2Q5VT97 1194 aa16.93■□□□□ 0.3
TPM3-205ENST00000328159 PSTPIP2Q9H939 334 aa16.93■□□□□ 0.3
TPM3-205ENST00000328159 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.93■□□□□ 0.3
TPM3-205ENST00000328159 TMEM232C9JQI7 657 aa16.92■□□□□ 0.3
TPM3-205ENST00000328159 TPM3P06753 285 aa16.92■□□□□ 0.3
TPM3-205ENST00000328159 PDXDC2PQ6P474 469 aa16.92■□□□□ 0.3
TPM3-205ENST00000328159 BTNL9Q6UXG8 535 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms