RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TCP11X2Q5H9J9 407 aa25.2■■□□□ 1.62
PNKP-201ENST00000322344 SOGA3Q5TF21 947 aa25.2■■□□□ 1.62
PNKP-201ENST00000322344 ADSSL1Q8N142 457 aa25.2■■□□□ 1.62
PNKP-201ENST00000322344 ZNF713Q8N859 430 aaPredicted RBP25.2■■□□□ 1.62
PNKP-201ENST00000322344 KBTBD4Q9NVX7 518 aa25.2■■□□□ 1.62
PNKP-201ENST00000322344 UBR3Q6ZT12 1888 aa25.2■■□□□ 1.62
PNKP-201ENST00000322344 KCNJ18B7U540 433 aa25.19■■□□□ 1.62
PNKP-201ENST00000322344 STIM1Q13586 685 aa25.19■■□□□ 1.62
PNKP-201ENST00000322344 KCNJ12Q14500 433 aa25.19■■□□□ 1.62
PNKP-201ENST00000322344 GTPBP4Q9BZE4 634 aaKnown RBP25.19■■□□□ 1.62
PNKP-201ENST00000322344 PLIN4Q96Q06 1357 aa25.19■■□□□ 1.62
PNKP-201ENST00000322344 ESYT2A0FGR8 921 aa25.19■■□□□ 1.62
PNKP-201ENST00000322344 SMCO2A6NFE2 343 aa25.19■■□□□ 1.62
PNKP-201ENST00000322344 FANCGO15287 622 aa25.19■■□□□ 1.62
PNKP-201ENST00000322344 OR52Z1P0C646 297 aa25.19■■□□□ 1.62
PNKP-201ENST00000322344 PRCPP42785 496 aa25.19■■□□□ 1.62
PNKP-201ENST00000322344 SLC27A3Q5K4L6 730 aa25.19■■□□□ 1.62
PNKP-201ENST00000322344 POLLQ9UGP5 575 aa25.19■■□□□ 1.62
PNKP-201ENST00000322344 GDAQ9Y2T3 454 aa25.19■■□□□ 1.62
PNKP-201ENST00000322344 SOWAHDA6NJG2 315 aa25.18■■□□□ 1.62
PNKP-201ENST00000322344 H2AFXP16104 143 aaPredicted RBP25.18■■□□□ 1.62
PNKP-201ENST00000322344 UBXN4Q92575 508 aa25.18■■□□□ 1.62
PNKP-201ENST00000322344 CEP95Q96GE4 821 aa25.18■■□□□ 1.62
PNKP-201ENST00000322344 SUGT1Q9Y2Z0 365 aa25.18■■□□□ 1.62
PNKP-201ENST00000322344 ADGRG1Q9Y653 693 aa25.18■■□□□ 1.62
PNKP-201ENST00000322344 EFCAB8A8MWE9 144 aa25.17■■□□□ 1.62
PNKP-201ENST00000322344 RHOBTB3O94955 611 aa25.17■■□□□ 1.62
PNKP-201ENST00000322344 GYPCP04921 128 aa25.17■■□□□ 1.62
PNKP-201ENST00000322344 CASP14P31944 242 aa25.17■■□□□ 1.62
PNKP-201ENST00000322344 CCT6AP40227 531 aaKnown RBP25.17■■□□□ 1.62
PNKP-201ENST00000322344 CPLX3Q8WVH0 158 aa25.17■■□□□ 1.62
PNKP-201ENST00000322344 DESI2Q9BSY9 194 aa25.17■■□□□ 1.62
PNKP-201ENST00000322344 KLRG2A4D1S0 409 aaPredicted RBP25.17■■□□□ 1.62
PNKP-201ENST00000322344 MAP3K9P80192 1104 aa25.17■■□□□ 1.62
PNKP-201ENST00000322344 NEK8Q86SG6 692 aa25.17■■□□□ 1.62
PNKP-201ENST00000322344 TMTC1Q8IUR5 882 aa25.17■■□□□ 1.62
PNKP-201ENST00000322344 CCDC47Q96A33 483 aaKnown RBP25.17■■□□□ 1.62
PNKP-201ENST00000322344 PP2D1A8MPX8 630 aa25.16■■□□□ 1.62
PNKP-201ENST00000322344 MEX3CQ5U5Q3 659 aaKnown RBP25.16■■□□□ 1.62
PNKP-201ENST00000322344 USP17L2Q6R6M4 530 aa25.16■■□□□ 1.62
PNKP-201ENST00000322344 RAD9BQ6WBX8 426 aa25.16■■□□□ 1.62
PNKP-201ENST00000322344 CABP7Q86V35 215 aa25.16■■□□□ 1.62
PNKP-201ENST00000322344 SEPT12Q8IYM1 358 aa25.16■■□□□ 1.62
PNKP-201ENST00000322344 LRRN4CLQ8ND94 238 aa25.16■■□□□ 1.62
PNKP-201ENST00000322344 NOC3LQ8WTT2 800 aaKnown RBP25.16■■□□□ 1.62
PNKP-201ENST00000322344 WDR24Q96S15 920 aa25.16■■□□□ 1.62
PNKP-201ENST00000322344 C6orf229H3BNL8 230 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 KLRC4O43908 158 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 TADA3O75528 432 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 MTF1Q14872 753 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 RASGRP2Q7LDG7 609 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 KIFC2Q96AC6 838 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 VPS16Q9H269 839 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 THAP9Q9H5L6 903 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 RIOX1Q9H6W3 641 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 TAB2Q9NYJ8 693 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 LRRC37AA6NMS7 1700 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 PSMA7O14818 248 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 PRKCSHP14314 528 aaPredicted RBP25.15■■□□□ 1.62
PNKP-201ENST00000322344 EEF1GP26641 437 aaKnown RBP25.15■■□□□ 1.62
PNKP-201ENST00000322344 SP8Q8IXZ3 490 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 GIMAP8Q8ND71 665 aaPredicted RBP25.15■■□□□ 1.62
PNKP-201ENST00000322344 MRPL44Q9H9J2 332 aaKnown RBP25.15■■□□□ 1.62
PNKP-201ENST00000322344 DAGLAQ9Y4D2 1042 aa25.15■■□□□ 1.62
PNKP-201ENST00000322344 MYH1P12882 1939 aa25.14■■□□□ 1.62
PNKP-201ENST00000322344 CCNT1O60563 726 aaKnown RBP25.14■■□□□ 1.62
PNKP-201ENST00000322344 PPP1R2P41236 205 aa25.14■■□□□ 1.62
PNKP-201ENST00000322344 FXR1P51114 621 aaKnown RBP eCLIP25.14■■□□□ 1.62
PNKP-201ENST00000322344 LETM2Q2VYF4 491 aa25.14■■□□□ 1.62
PNKP-201ENST00000322344 ARHGAP29Q52LW3 1261 aa25.14■■□□□ 1.62
PNKP-201ENST00000322344 CARD6Q9BX69 1037 aa25.14■■□□□ 1.62
PNKP-201ENST00000322344 MRFAP1Q9Y605 127 aa25.14■■□□□ 1.62
PNKP-201ENST00000322344 COBLO75128 1261 aa25.13■■□□□ 1.61
PNKP-201ENST00000322344 ASPRV1Q53RT3 343 aa25.13■■□□□ 1.61
PNKP-201ENST00000322344 DHTKD1Q96HY7 919 aaPredicted RBP25.13■■□□□ 1.61
PNKP-201ENST00000322344 PIGSQ96S52 555 aa25.13■■□□□ 1.61
PNKP-201ENST00000322344 COA1Q9GZY4 146 aa25.13■■□□□ 1.61
PNKP-201ENST00000322344 CPVLQ9H3G5 476 aa25.13■■□□□ 1.61
PNKP-201ENST00000322344 ARGLU1Q9NWB6 273 aaPredicted RBP25.13■■□□□ 1.61
PNKP-201ENST00000322344 TTF2Q9UNY4 1162 aaKnown RBP25.13■■□□□ 1.61
PNKP-201ENST00000322344 HMGB2P26583 209 aaKnown RBP25.13■■□□□ 1.61
PNKP-201ENST00000322344 REXO1Q8N1G1 1221 aaKnown RBP25.13■■□□□ 1.61
PNKP-201ENST00000322344 ABHD10Q9NUJ1 306 aa25.13■■□□□ 1.61
PNKP-201ENST00000322344 FOCADQ5VW36 1801 aa25.13■■□□□ 1.61
PNKP-201ENST00000322344 LTBP1Q14766 1721 aa25.13■■□□□ 1.61
PNKP-201ENST00000322344 POLRMTO00411 1230 aaKnown RBP25.12■■□□□ 1.61
PNKP-201ENST00000322344 DDR1Q08345 913 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 MTMR4Q9NYA4 1195 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 TRPC5Q9UL62 973 aaPredicted RBP25.12■■□□□ 1.61
PNKP-201ENST00000322344 MAPK8IP1Q9UQF2 711 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 AFF2P51816 1311 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 A0A1W2PQC6 194 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 USP17L5A8MUK1 530 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 PPEF1O14829 653 aaPredicted RBP25.12■■□□□ 1.61
PNKP-201ENST00000322344 KIF5CO60282 957 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 PDHBP11177 359 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 PLCG1P19174 1290 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 AMPD3Q01432 767 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 GABPAQ06546 454 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 TXNRD1Q16881 649 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms