RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 PTPDC1A2A3K4 754 aa24.46■■□□□ 1.51
YBX1-201ENST00000321358 PPFIA3O75145 1194 aa24.46■■□□□ 1.51
YBX1-201ENST00000321358 PLS1Q14651 629 aa24.46■■□□□ 1.51
YBX1-201ENST00000321358 CCDC174Q6PII3 467 aa24.46■■□□□ 1.51
YBX1-201ENST00000321358 INTS4Q96HW7 963 aaKnown RBP24.46■■□□□ 1.51
YBX1-201ENST00000321358 PAGR1Q9BTK6 254 aa24.46■■□□□ 1.51
YBX1-201ENST00000321358 ORC3Q9UBD5 711 aaPredicted RBP24.46■■□□□ 1.51
YBX1-201ENST00000321358 SMC3Q9UQE7 1217 aa24.46■■□□□ 1.51
YBX1-201ENST00000321358 RABGAP1Q9Y3P9 1069 aa24.46■■□□□ 1.51
YBX1-201ENST00000321358 LOC285556D6RIA3 1793 aa24.46■■□□□ 1.51
YBX1-201ENST00000321358 CA12O43570 354 aa24.45■■□□□ 1.51
YBX1-201ENST00000321358 DEXIO95424 95 aa24.45■■□□□ 1.51
YBX1-201ENST00000321358 CTDNEP1O95476 244 aa24.45■■□□□ 1.51
YBX1-201ENST00000321358 OAZ1P54368 228 aa24.45■■□□□ 1.51
YBX1-201ENST00000321358 SNAP25P60880 206 aa24.45■■□□□ 1.51
YBX1-201ENST00000321358 QRICH1Q2TAL8 776 aa24.45■■□□□ 1.51
YBX1-201ENST00000321358 CPXCR1Q8N123 301 aa24.45■■□□□ 1.51
YBX1-201ENST00000321358 FAM184AQ8NB25 1140 aa24.45■■□□□ 1.51
YBX1-201ENST00000321358 MTMR8Q96EF0 704 aa24.45■■□□□ 1.51
YBX1-201ENST00000321358 BEGAINQ9BUH8 593 aa24.45■■□□□ 1.51
YBX1-201ENST00000321358 AMNQ9BXJ7 453 aa24.45■■□□□ 1.51
YBX1-201ENST00000321358 PTPRFP10586 1907 aa24.45■■□□□ 1.5
YBX1-201ENST00000321358 hCG_1642624A0A1W2PR95 340 aa24.45■■□□□ 1.5
YBX1-201ENST00000321358 MAP2K1Q02750 393 aaPredicted RBP24.45■■□□□ 1.5
YBX1-201ENST00000321358 ST3GAL1Q11201 340 aa24.45■■□□□ 1.5
YBX1-201ENST00000321358 SLC35G1Q2M3R5 365 aa24.45■■□□□ 1.5
YBX1-201ENST00000321358 FBXO11Q86XK2 927 aa24.45■■□□□ 1.5
YBX1-201ENST00000321358 DDX11Q96FC9 970 aa24.45■■□□□ 1.5
YBX1-201ENST00000321358 STK36Q9NRP7 1315 aa24.44■■□□□ 1.5
YBX1-201ENST00000321358 ICAM1P05362 532 aa24.44■■□□□ 1.5
YBX1-201ENST00000321358 TLR2O60603 784 aa24.43■■□□□ 1.5
YBX1-201ENST00000321358 JAK2O60674 1132 aa24.43■■□□□ 1.5
YBX1-201ENST00000321358 XBP1P17861 261 aa24.43■■□□□ 1.5
YBX1-201ENST00000321358 SLC4A3P48751 1232 aa24.43■■□□□ 1.5
YBX1-201ENST00000321358 GPRC5AQ8NFJ5 357 aa24.43■■□□□ 1.5
YBX1-201ENST00000321358 TEX13BQ9BXU2 312 aa24.43■■□□□ 1.5
YBX1-201ENST00000321358 RAVER2Q9HCJ3 691 aaKnown RBP24.43■■□□□ 1.5
YBX1-201ENST00000321358 CCPG1Q9ULG6 757 aa24.43■■□□□ 1.5
YBX1-201ENST00000321358 ATP2A1O14983 1001 aa24.42■■□□□ 1.5
YBX1-201ENST00000321358 SCG2P13521 617 aa24.42■■□□□ 1.5
YBX1-201ENST00000321358 STAT3P40763 770 aa24.42■■□□□ 1.5
YBX1-201ENST00000321358 CCNA1P78396 465 aa24.42■■□□□ 1.5
YBX1-201ENST00000321358 CRHR2Q13324 411 aa24.42■■□□□ 1.5
YBX1-201ENST00000321358 TMEM132BQ14DG7 1078 aa24.42■■□□□ 1.5
YBX1-201ENST00000321358 PFKFB3Q16875 520 aaPredicted RBP24.42■■□□□ 1.5
YBX1-201ENST00000321358 HEATR3Q7Z4Q2 680 aa24.42■■□□□ 1.5
YBX1-201ENST00000321358 CCAR1Q8IX12 1150 aaKnown RBP24.42■■□□□ 1.5
YBX1-201ENST00000321358 ANKRD13CQ8N6S4 541 aa24.42■■□□□ 1.5
YBX1-201ENST00000321358 SMARCC2Q8TAQ2 1214 aa24.42■■□□□ 1.5
YBX1-201ENST00000321358 RBPJLQ9UBG7 517 aa24.42■■□□□ 1.5
YBX1-201ENST00000321358 PCDHA1Q9Y5I3 950 aa24.42■■□□□ 1.5
YBX1-201ENST00000321358 hCG_1984214I3L0E3 225 aa24.41■■□□□ 1.5
YBX1-201ENST00000321358 SNRNP48Q6IEG0 339 aaKnown RBP24.41■■□□□ 1.5
YBX1-201ENST00000321358 ZNF713Q8N859 430 aaPredicted RBP24.41■■□□□ 1.5
YBX1-201ENST00000321358 SPATC1LQ9H0A9 340 aa24.41■■□□□ 1.5
YBX1-201ENST00000321358 FOXD4L1Q9NU39 408 aa24.41■■□□□ 1.5
YBX1-201ENST00000321358 TRPA1O75762 1119 aa24.4■■□□□ 1.5
YBX1-201ENST00000321358 COPB2P35606 906 aa24.4■■□□□ 1.5
YBX1-201ENST00000321358 USH1GQ495M9 461 aa24.4■■□□□ 1.5
YBX1-201ENST00000321358 REPS2Q8NFH8 660 aa24.4■■□□□ 1.5
YBX1-201ENST00000321358 CCDC12Q8WUD4 166 aaPredicted RBP24.4■■□□□ 1.5
YBX1-201ENST00000321358 AGBL1Q96MI9 1066 aa24.4■■□□□ 1.5
YBX1-201ENST00000321358 RNF186Q9NXI6 227 aa24.4■■□□□ 1.5
YBX1-201ENST00000321358 BTBD7Q9P203 1132 aa24.4■■□□□ 1.5
YBX1-201ENST00000321358 CPA4Q9UI42 421 aa24.4■■□□□ 1.5
YBX1-201ENST00000321358 ZNF214Q9UL59 606 aaPredicted RBP24.4■■□□□ 1.5
YBX1-201ENST00000321358 HSPA1AP0DMV8 641 aaKnown RBP24.4■■□□□ 1.5
YBX1-201ENST00000321358 HSPA1BP0DMV9 641 aaKnown RBP24.4■■□□□ 1.5
YBX1-201ENST00000321358 ERVK-9P63128 1117 aa24.4■■□□□ 1.5
YBX1-201ENST00000321358 ERVK-24P63145 666 aa24.4■■□□□ 1.5
YBX1-201ENST00000321358 FAM110CQ1W6H9 321 aa24.4■■□□□ 1.5
YBX1-201ENST00000321358 ALG1Q9BT22 464 aa24.4■■□□□ 1.5
YBX1-201ENST00000321358 MORF4L1Q9UBU8 362 aa24.4■■□□□ 1.5
YBX1-201ENST00000321358 MRPL11Q9Y3B7 192 aaKnown RBP24.4■■□□□ 1.5
YBX1-201ENST00000321358 SLC25A27O95847 323 aa24.39■■□□□ 1.49
YBX1-201ENST00000321358 ALAS1P13196 640 aa24.39■■□□□ 1.49
YBX1-201ENST00000321358 GJB2P29033 226 aa24.39■■□□□ 1.49
YBX1-201ENST00000321358 TRIM29Q14134 588 aa24.39■■□□□ 1.49
YBX1-201ENST00000321358 TKFCQ3LXA3 575 aa24.39■■□□□ 1.49
YBX1-201ENST00000321358 SPRYD3Q8NCJ5 442 aa24.39■■□□□ 1.49
YBX1-201ENST00000321358 TXNRD2Q9NNW7 524 aa24.39■■□□□ 1.49
YBX1-201ENST00000321358 ABCB11O95342 1321 aa24.38■■□□□ 1.49
YBX1-201ENST00000321358 DTNBO60941 627 aa24.38■■□□□ 1.49
YBX1-201ENST00000321358 NAPAP54920 295 aa24.38■■□□□ 1.49
YBX1-201ENST00000321358 PKN1Q16512 942 aa24.38■■□□□ 1.49
YBX1-201ENST00000321358 RIOX2Q8IUF8 465 aa24.38■■□□□ 1.49
YBX1-201ENST00000321358 COA7Q96BR5 231 aa24.38■■□□□ 1.49
YBX1-201ENST00000321358 CWC22Q9HCG8 908 aaKnown RBP24.38■■□□□ 1.49
YBX1-201ENST00000321358 SAGE1Q9NXZ1 904 aa24.38■■□□□ 1.49
YBX1-201ENST00000321358 BARHL2Q9NY43 387 aa24.38■■□□□ 1.49
YBX1-201ENST00000321358 ZNF536O15090 1300 aa24.38■■□□□ 1.49
YBX1-201ENST00000321358 CNMDO75829 334 aa24.37■■□□□ 1.49
YBX1-201ENST00000321358 FDPSP14324 419 aaKnown RBP24.37■■□□□ 1.49
YBX1-201ENST00000321358 WWC2Q6AWC2 1192 aa24.37■■□□□ 1.49
YBX1-201ENST00000321358 C17orf99Q6UX52 265 aa24.37■■□□□ 1.49
YBX1-201ENST00000321358 CCDC148Q8NFR7 591 aa24.37■■□□□ 1.49
YBX1-201ENST00000321358 GPKOWQ92917 476 aaPredicted RBP eCLIP24.37■■□□□ 1.495e-8■■■□□ 19.1
YBX1-201ENST00000321358 SH3GLB2Q9NR46 395 aa24.37■■□□□ 1.49
YBX1-201ENST00000321358 HOMER2Q9NSB8 354 aa24.37■■□□□ 1.49
YBX1-201ENST00000321358 FBXO40Q9UH90 709 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms