RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 PIBF1Q8WXW3 757 aa15.7■□□□□ 0.1
PRPF18-201ENST00000320054 BRI3BPQ8WY22 251 aa15.7■□□□□ 0.1
PRPF18-201ENST00000320054 AIFM3Q96NN9 605 aa15.7■□□□□ 0.1
PRPF18-201ENST00000320054 SLC38A10Q9HBR0 1119 aa15.7■□□□□ 0.1
PRPF18-201ENST00000320054 BARHL2Q9NY43 387 aa15.7■□□□□ 0.1
PRPF18-201ENST00000320054 CHMP5Q9NZZ3 219 aa15.7■□□□□ 0.1
PRPF18-201ENST00000320054 RASSF10A6NK89 507 aa15.69■□□□□ 0.1
PRPF18-201ENST00000320054 STXBP3O00186 592 aa15.69■□□□□ 0.1
PRPF18-201ENST00000320054 VWA5AO00534 786 aa15.69■□□□□ 0.1
PRPF18-201ENST00000320054 PPP1R11O60927 126 aaPredicted RBP15.69■□□□□ 0.1
PRPF18-201ENST00000320054 ZBED4O75132 1171 aa15.69■□□□□ 0.1
PRPF18-201ENST00000320054 OSBPP22059 807 aa15.69■□□□□ 0.1
PRPF18-201ENST00000320054 INHBEP58166 350 aa15.69■□□□□ 0.1
PRPF18-201ENST00000320054 WWC2Q6AWC2 1192 aa15.69■□□□□ 0.1
PRPF18-201ENST00000320054 LBX2Q6XYB7 198 aa15.69■□□□□ 0.1
PRPF18-201ENST00000320054 FBXO11Q86XK2 927 aa15.69■□□□□ 0.1
PRPF18-201ENST00000320054 CCDC12Q8WUD4 166 aaPredicted RBP15.69■□□□□ 0.1
PRPF18-201ENST00000320054 AMNQ9BXJ7 453 aa15.69■□□□□ 0.1
PRPF18-201ENST00000320054 ZCCHC17Q9NP64 241 aaKnown RBP15.69■□□□□ 0.1
PRPF18-201ENST00000320054 PNMA3Q9UL41 463 aa15.69■□□□□ 0.1
PRPF18-201ENST00000320054 WDR33Q9C0J8 1336 aaKnown RBP15.68■□□□□ 0.1
PRPF18-201ENST00000320054 SPDYE16A6NNV3 312 aaPredicted RBP15.68■□□□□ 0.1
PRPF18-201ENST00000320054 H3BQV1 296 aa15.68■□□□□ 0.1
PRPF18-201ENST00000320054 OAZ1P54368 228 aa15.68■□□□□ 0.1
PRPF18-201ENST00000320054 IRX3P78415 501 aaPredicted RBP15.68■□□□□ 0.1
PRPF18-201ENST00000320054 MKRN3Q13064 507 aaKnown RBP15.68■□□□□ 0.1
PRPF18-201ENST00000320054 IFFO2Q5TF58 517 aa15.68■□□□□ 0.1
PRPF18-201ENST00000320054 KRT40Q6A162 431 aa15.68■□□□□ 0.1
PRPF18-201ENST00000320054 HEATR3Q7Z4Q2 680 aa15.68■□□□□ 0.1
PRPF18-201ENST00000320054 CCDC148Q8NFR7 591 aa15.68■□□□□ 0.1
PRPF18-201ENST00000320054 GPKOWQ92917 476 aaPredicted RBP eCLIP15.68■□□□□ 0.1
PRPF18-201ENST00000320054 ATG4CQ96DT6 458 aa15.68■□□□□ 0.1
PRPF18-201ENST00000320054 PHF20Q9BVI0 1012 aa15.68■□□□□ 0.1
PRPF18-201ENST00000320054 ASCC2Q9H1I8 757 aaPredicted RBP15.68■□□□□ 0.1
PRPF18-201ENST00000320054 MTMR6Q9Y217 621 aa15.68■□□□□ 0.1
PRPF18-201ENST00000320054 ESYT2A0FGR8 921 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 BTBD19C9JJ37 291 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 ATP2A1O14983 1001 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 BRD1O95696 1058 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 ICAM1P05362 532 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 CALML3P27482 149 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 DEFB115Q30KQ5 88 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 GALNT17Q6IS24 598 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 TEX2Q8IWB9 1127 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 MB21D1Q8N884 522 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 REPS2Q8NFH8 660 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 GTF3C2Q8WUA4 911 aaPredicted RBP15.67■□□□□ 0.1
PRPF18-201ENST00000320054 SHISA4Q96DD7 197 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 P2RX7Q99572 595 aaKnown RBP15.67■□□□□ 0.1
PRPF18-201ENST00000320054 GJB4Q9NTQ9 266 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 VPS54Q9P1Q0 977 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 ZNF536O15090 1300 aa15.67■□□□□ 0.1
PRPF18-201ENST00000320054 TCHHQ07283 1943 aa15.66■□□□□ 0.1
PRPF18-201ENST00000320054 VPS37CA5D8V6 355 aaPredicted RBP15.66■□□□□ 0.1
PRPF18-201ENST00000320054 PDHXO00330 501 aa15.66■□□□□ 0.1
PRPF18-201ENST00000320054 MMP1P03956 469 aa15.66■□□□□ 0.1
PRPF18-201ENST00000320054 ZSCAN22P10073 491 aaPredicted RBP15.66■□□□□ 0.1
PRPF18-201ENST00000320054 NAPAP54920 295 aa15.66■□□□□ 0.1
PRPF18-201ENST00000320054 SNAP25P60880 206 aa15.66■□□□□ 0.1
PRPF18-201ENST00000320054 HERVK_113P62684 666 aa15.66■□□□□ 0.1
PRPF18-201ENST00000320054 TYW1BQ6NUM6 668 aa15.66■□□□□ 0.1
PRPF18-201ENST00000320054 CCDC174Q6PII3 467 aa15.66■□□□□ 0.1
PRPF18-201ENST00000320054 SAMD1Q6SPF0 538 aaPredicted RBP15.66■□□□□ 0.1
PRPF18-201ENST00000320054 COA7Q96BR5 231 aa15.66■□□□□ 0.1
PRPF18-201ENST00000320054 PTPN18Q99952 460 aa15.66■□□□□ 0.1
PRPF18-201ENST00000320054 ZMYND12Q9H0C1 365 aa15.66■□□□□ 0.1
PRPF18-201ENST00000320054 CTDP1Q9Y5B0 961 aaPredicted RBP15.66■□□□□ 0.1
PRPF18-201ENST00000320054 PCDHA1Q9Y5I3 950 aa15.66■□□□□ 0.1
PRPF18-201ENST00000320054 ABCB11O95342 1321 aa15.66■□□□□ 0.1
PRPF18-201ENST00000320054 THSD7BQ9C0I4 1608 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 FOSBP53539 338 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 NLRP5P59047 1200 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 GUCY1B3Q02153 619 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 SREBF2Q12772 1141 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 NOGQ13253 232 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 PKP1Q13835 747 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 SAFBQ15424 915 aaKnown RBP eCLIP15.65■□□□□ 0.1
PRPF18-201ENST00000320054 OTUD7BQ6GQQ9 843 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 REM2Q8IYK8 340 aaPredicted RBP15.65■□□□□ 0.1
PRPF18-201ENST00000320054 FAM43AQ8N2R8 423 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 DAGLBQ8NCG7 672 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 GLT8D2Q9H1C3 349 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 C6orf50Q9HD87 102 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 ZNF214Q9UL59 606 aaPredicted RBP15.65■□□□□ 0.1
PRPF18-201ENST00000320054 KCNJ14Q9UNX9 436 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
PRPF18-201ENST00000320054 ZNFX1Q9P2E3 1918 aaKnown RBP15.64■□□□□ 0.09
PRPF18-201ENST00000320054 GNA11P29992 359 aa15.64■□□□□ 0.09
PRPF18-201ENST00000320054 TM4SF4P48230 202 aa15.64■□□□□ 0.09
PRPF18-201ENST00000320054 TMEM132BQ14DG7 1078 aa15.64■□□□□ 0.09
PRPF18-201ENST00000320054 NPY5RQ15761 445 aa15.64■□□□□ 0.09
PRPF18-201ENST00000320054 TKFCQ3LXA3 575 aa15.64■□□□□ 0.09
PRPF18-201ENST00000320054 CYP4F22Q6NT55 531 aa15.64■□□□□ 0.09
PRPF18-201ENST00000320054 CAPNS2Q96L46 248 aa15.64■□□□□ 0.09
PRPF18-201ENST00000320054 CCPG1Q9ULG6 757 aa15.64■□□□□ 0.09
PRPF18-201ENST00000320054 PCDHA4Q9UN74 947 aa15.64■□□□□ 0.09
PRPF18-201ENST00000320054 MRPL11Q9Y3B7 192 aaKnown RBP15.64■□□□□ 0.09
PRPF18-201ENST00000320054 RABGAP1Q9Y3P9 1069 aa15.64■□□□□ 0.09
PRPF18-201ENST00000320054 MYH7BA7E2Y1 1941 aa15.63■□□□□ 0.09
PRPF18-201ENST00000320054 SMCO2A6NFE2 343 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms