RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 GFPT1Q06210 699 aaPredicted RBP10.76□□□□□ -0.69
RPGR-201ENST00000318842 ACTN3Q08043 901 aaPredicted RBP10.76□□□□□ -0.69
RPGR-201ENST00000318842 ANKRD40Q6AI12 368 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 TADA2BQ86TJ2 420 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 DDX42Q86XP3 938 aaKnown RBP eCLIP10.76□□□□□ -0.69
RPGR-201ENST00000318842 DZIP3Q86Y13 1208 aaKnown RBP10.76□□□□□ -0.69
RPGR-201ENST00000318842 ANKRD18AQ8IVF6 992 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 HOMEZQ8IX15 550 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 FAM76AQ8TAV0 307 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 PSD3Q9NYI0 1048 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 NFU1Q9UMS0 254 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 CAPN7Q9Y6W3 813 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 TBC1D8BQ0IIM8 1120 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 SEC23AQ15436 765 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 CCNI2Q6ZMN8 369 aaPredicted RBP10.76□□□□□ -0.69
RPGR-201ENST00000318842 CSGALNACT2Q8N6G5 542 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 MMRN2Q9H8L6 949 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 MYH2Q9UKX2 1941 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 GRIN2DO15399 1336 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 MTIF2P46199 727 aaKnown RBP10.75□□□□□ -0.69
RPGR-201ENST00000318842 RASSF7Q02833 373 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 RNF187Q5TA31 235 aaPredicted RBP10.75□□□□□ -0.69
RPGR-201ENST00000318842 SUSD4Q5VX71 490 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 KSR1Q8IVT5 923 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 ZSCAN10Q96SZ4 725 aaPredicted RBP10.75□□□□□ -0.69
RPGR-201ENST00000318842 TUBGCP2Q9BSJ2 902 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 LIMA1Q9UHB6 759 aaKnown RBP10.75□□□□□ -0.69
RPGR-201ENST00000318842 PKD1L3Q7Z443 1732 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 STK36Q9NRP7 1315 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 EP400Q96L91 3159 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 ERLIN2O94905 339 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 GLI1P08151 1106 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 IQUBQ8NA54 791 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 ACSBG1Q96GR2 724 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 GSDMAQ96QA5 445 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 JPH2Q9BR39 696 aaPredicted RBP10.75□□□□□ -0.69
RPGR-201ENST00000318842 SCN11AQ9UI33 1791 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 COL4A1P02462 1669 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 USP17L3A6NCW0 530 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 USP17L4A6NCW7 530 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 PUM3Q15397 648 aaKnown RBP10.75□□□□□ -0.69
RPGR-201ENST00000318842 USP17L1Q7RTZ2 530 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 CREG2Q8IUH2 290 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 KLHL7Q8IXQ5 586 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 WASF1Q92558 559 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 GPR101Q96P66 508 aaPredicted RBP10.75□□□□□ -0.69
RPGR-201ENST00000318842 CAPS2Q9BXY5 557 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 KRT23Q9C075 422 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 TSPYL1Q9H0U9 437 aa10.75□□□□□ -0.69
RPGR-201ENST00000318842 EIF4A3P38919 411 aaKnown RBP10.74□□□□□ -0.69
RPGR-201ENST00000318842 MMP14P50281 582 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 TROAPQ12815 778 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 SLC35G1Q2M3R5 365 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 HEATR3Q7Z4Q2 680 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 TRIML1Q8N9V2 468 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.74□□□□□ -0.69
RPGR-201ENST00000318842 MTMR8Q96EF0 704 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 CNOT6LQ96LI5 555 aaKnown RBP10.74□□□□□ -0.69
RPGR-201ENST00000318842 CCDC43Q96MW1 224 aaKnown RBP10.74□□□□□ -0.69
RPGR-201ENST00000318842 DUSP9Q99956 384 aaKnown RBP10.74□□□□□ -0.69
RPGR-201ENST00000318842 BAZ2AQ9UIF9 1905 aaKnown RBP10.74□□□□□ -0.69
RPGR-201ENST00000318842 SLURP2P0DP57 97 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 HNRNPH1P31943 449 aaKnown RBP10.74□□□□□ -0.69
RPGR-201ENST00000318842 SLC1A4P43007 532 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 RRAGAQ7L523 313 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 STAG1Q8WVM7 1258 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 RNPC3Q96LT9 517 aaKnown RBP10.74□□□□□ -0.69
RPGR-201ENST00000318842 ZIM3Q96PE6 472 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 CTAGE1Q96RT6 745 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 NAA15Q9BXJ9 866 aaKnown RBP10.74□□□□□ -0.69
RPGR-201ENST00000318842 PACSIN1Q9BY11 444 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 ARHGAP20Q9P2F6 1191 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 RWDD2AQ9UIY3 292 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 CEP131Q9UPN4 1083 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 ABCC12Q96J65 1359 aa10.74□□□□□ -0.69
RPGR-201ENST00000318842 EIF4E1BA6NMX2 242 aaKnown RBP10.73□□□□□ -0.69
RPGR-201ENST00000318842 NDUFAB1O14561 156 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 USP17L8P0C7I0 530 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 ATP2C1P98194 919 aaPredicted RBP10.73□□□□□ -0.69
RPGR-201ENST00000318842 GUCY2DQ02846 1103 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 GIGYF2Q6Y7W6 1299 aaKnown RBP10.73□□□□□ -0.69
RPGR-201ENST00000318842 CATIPQ7Z7H3 387 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 TNFRSF25Q93038 417 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 NOC4LQ9BVI4 516 aaKnown RBP10.73□□□□□ -0.69
RPGR-201ENST00000318842 NACAP1Q9BZK3 213 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 PPANQ9NQ55 473 aaKnown RBP10.73□□□□□ -0.69
RPGR-201ENST00000318842 HYOU1Q9Y4L1 999 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 MAGEB6P1A0A0J9YX57 407 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 LGALS16A8MUM7 142 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 ATF3P18847 181 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 PLCG1P19174 1290 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 TECP42680 631 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 ASIC1P78348 528 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 TSR1Q2NL82 804 aaKnown RBP10.73□□□□□ -0.69
RPGR-201ENST00000318842 LETM2Q2VYF4 491 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 ZNF658Q5TYW1 1059 aaPredicted RBP10.73□□□□□ -0.69
RPGR-201ENST00000318842 WDR93Q6P2C0 686 aa10.73□□□□□ -0.69
RPGR-201ENST00000318842 ADAT2Q7Z6V5 191 aaKnown RBP10.73□□□□□ -0.69
RPGR-201ENST00000318842 ZNF579Q8NAF0 562 aaKnown RBP10.73□□□□□ -0.69
RPGR-201ENST00000318842 SPATA4Q8NEY3 305 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms