RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 TCEANC2Q96MN5 208 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 JAKMIP1Q96N16 626 aaKnown RBP10.59□□□□□ -0.71
CAPN3-201ENST00000318023 FSD1Q9BTV5 496 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 TRIM6Q9C030 488 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-201ENST00000318023 IMPACTQ9P2X3 320 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 ODF2LQ9ULJ1 636 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 MROH7-TTC4A0A0A0MT08 1334 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 MAST3O60307 1309 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 ADAMTSL1Q8N6G6 1762 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 SEMA3EO15041 775 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 RAD21O60216 631 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 WDHD1O75717 1129 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-201ENST00000318023 PDE6AP16499 860 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 SSR1P43307 286 aaKnown RBP10.59□□□□□ -0.71
CAPN3-201ENST00000318023 CHMP4BP1P59074 171 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 KIF23Q02241 960 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-201ENST00000318023 ACTN3Q08043 901 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-201ENST00000318023 ARMC3Q5W041 872 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 ARMC9Q7Z3E5 817 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 TICAM2Q86XR7 235 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 AFAP1L1Q8TED9 768 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 CABS1Q96KC9 395 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 FTOQ9C0B1 505 aaKnown RBP eCLIP10.59□□□□□ -0.71
CAPN3-201ENST00000318023 GPR108Q9NPR9 543 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 L1RE1Q9UN81 338 aa10.59□□□□□ -0.71
CAPN3-201ENST00000318023 LRRIQ3A6PVS8 624 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-201ENST00000318023 CAND2O75155 1236 aa10.58□□□□□ -0.72
CAPN3-201ENST00000318023 GCFC2P16383 781 aaKnown RBP10.58□□□□□ -0.72
CAPN3-201ENST00000318023 COL9A3Q14050 684 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-201ENST00000318023 SUPT20HL1Q3ZLR7 823 aa10.58□□□□□ -0.72
CAPN3-201ENST00000318023 HHIPL2Q6UWX4 724 aa10.58□□□□□ -0.72
CAPN3-201ENST00000318023 ZBED3Q96IU2 234 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-201ENST00000318023 IRX2Q9BZI1 471 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-201ENST00000318023 IRAK4Q9NWZ3 460 aa10.58□□□□□ -0.72
CAPN3-201ENST00000318023 SAMM50Q9Y512 469 aa10.58□□□□□ -0.72
CAPN3-201ENST00000318023 TLL2Q9Y6L7 1015 aa10.58□□□□□ -0.72
CAPN3-201ENST00000318023 EBAG9O00559 213 aa10.58□□□□□ -0.72
CAPN3-201ENST00000318023 MBD4O95243 580 aa10.58□□□□□ -0.72
CAPN3-201ENST00000318023 TUBB4AP04350 444 aa10.58□□□□□ -0.72
CAPN3-201ENST00000318023 KARSQ15046 597 aaKnown RBP10.58□□□□□ -0.72
CAPN3-201ENST00000318023 CCDC129Q6ZRS4 1044 aa10.58□□□□□ -0.72
CAPN3-201ENST00000318023 THOC1Q96FV9 657 aaKnown RBP10.58□□□□□ -0.72
CAPN3-201ENST00000318023 GPATCH3Q96I76 525 aa10.58□□□□□ -0.72
CAPN3-201ENST00000318023 FAM107BQ9H098 131 aa10.58□□□□□ -0.72
CAPN3-201ENST00000318023 CENPHQ9H3R5 247 aa10.58□□□□□ -0.72
CAPN3-201ENST00000318023 SGSM2O43147 1006 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 PEX19P40855 299 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 FOSBP53539 338 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 VSNL1P62760 191 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 DGKZQ13574 1117 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 SH3BP5LQ7L8J4 393 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 LCORLQ8N3X6 602 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 CCDC12Q8WUD4 166 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-201ENST00000318023 ACBD3Q9H3P7 528 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 GOLPH3LQ9H4A5 285 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 SCN4AP35499 1836 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 BIN1O00499 593 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 AP1G2O75843 785 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 GDF11O95390 407 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 BAG3O95817 575 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 LDHCP07864 332 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 CYP2D6P10635 497 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 STK3Q13188 491 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 ZYXQ15942 572 aaKnown RBP10.57□□□□□ -0.72
CAPN3-201ENST00000318023 CRACR2BQ8N4Y2 399 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-201ENST00000318023 GDAP1L1Q96MZ0 367 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 TEPSINQ96N21 525 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 ANO10Q9NW15 660 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 CCP110O43303 1012 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 USP2O75604 605 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-201ENST00000318023 RHBDL3P58872 404 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 PUS7LQ9H0K6 701 aaKnown RBP10.57□□□□□ -0.72
CAPN3-201ENST00000318023 MCM9Q9NXL9 1143 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 PPP2R2CQ9Y2T4 447 aa10.57□□□□□ -0.72
CAPN3-201ENST00000318023 CNTNAP1P78357 1384 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 MAGEB6P1A0A0J9YX57 407 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 MYCP01106 439 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-201ENST00000318023 LBX1P52954 281 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 IRX1P78414 480 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-201ENST00000318023 GSTO1P78417 241 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 VGLL4Q14135 290 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 DPCR1Q3MIW9 517 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 CEP57Q86XR8 500 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 CCAR1Q8IX12 1150 aaKnown RBP10.56□□□□□ -0.72
CAPN3-201ENST00000318023 SLF2Q8IX21 1173 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 STAG1Q8WVM7 1258 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 TPCN1Q9ULQ1 816 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 CSADQ9Y600 493 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 MINDY4BA8MYZ0 360 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 ERLIN1O75477 346 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 POLR3DP05423 398 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-201ENST00000318023 ATP1A3P13637 1013 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 CLNS1AP54105 237 aaKnown RBP10.56□□□□□ -0.72
CAPN3-201ENST00000318023 FKBP1AP62942 108 aaKnown RBP10.56□□□□□ -0.72
CAPN3-201ENST00000318023 IQCA1Q86XH1 822 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 FMNL3Q8IVF7 1028 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 SLC44A5Q8NCS7 719 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 KCNB2Q92953 911 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 IL17RAQ96F46 866 aa10.56□□□□□ -0.72
CAPN3-201ENST00000318023 DESI2Q9BSY9 194 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms