RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 VCPKMTQ9H867 229 aa18■□□□□ 0.47
CALR-201ENST00000316448 ADARB2Q9NS39 739 aaKnown RBP18■□□□□ 0.47
CALR-201ENST00000316448 KINO60870 393 aaKnown RBP17.99■□□□□ 0.47
CALR-201ENST00000316448 PTPREP23469 700 aa17.99■□□□□ 0.47
CALR-201ENST00000316448 DGKZQ13574 1117 aa17.99■□□□□ 0.47
CALR-201ENST00000316448 SSC5DA1L4H1 1573 aa17.99■□□□□ 0.47
CALR-201ENST00000316448 ESYT2A0FGR8 921 aa17.98■□□□□ 0.47
CALR-201ENST00000316448 EDIL3O43854 480 aa17.98■□□□□ 0.47
CALR-201ENST00000316448 CTNND1O60716 968 aaKnown RBP17.98■□□□□ 0.47
CALR-201ENST00000316448 CMA1P23946 247 aa17.98■□□□□ 0.47
CALR-201ENST00000316448 CDC37Q16543 378 aaPredicted RBP17.98■□□□□ 0.47
CALR-201ENST00000316448 SPECC1Q5M775 1068 aa17.98■□□□□ 0.47
CALR-201ENST00000316448 SYDE2Q5VT97 1194 aa17.98■□□□□ 0.47
CALR-201ENST00000316448 FAM177A1Q8N128 213 aaPredicted RBP17.98■□□□□ 0.47
CALR-201ENST00000316448 JMYQ8N9B5 988 aa17.98■□□□□ 0.47
CALR-201ENST00000316448 ZNF341Q9BYN7 854 aa17.98■□□□□ 0.47
CALR-201ENST00000316448 C6orf50Q9HD87 102 aa17.98■□□□□ 0.47
CALR-201ENST00000316448 BIN2Q9UBW5 565 aaPredicted RBP17.98■□□□□ 0.47
CALR-201ENST00000316448 INF2Q27J81 1249 aa17.98■□□□□ 0.47
CALR-201ENST00000316448 C4orf32Q8N8J7 132 aa17.98■□□□□ 0.47
CALR-201ENST00000316448 ZKSCAN4Q969J2 545 aaPredicted RBP17.98■□□□□ 0.47
CALR-201ENST00000316448 PRR12Q9ULL5 1215 aa17.98■□□□□ 0.47
CALR-201ENST00000316448 NOL7Q9UMY1 257 aaKnown RBP17.98■□□□□ 0.47
CALR-201ENST00000316448 hCG_1984214I3L0E3 225 aa17.97■□□□□ 0.47
CALR-201ENST00000316448 CUTAO60888 179 aa17.97■□□□□ 0.47
CALR-201ENST00000316448 PFKFB1P16118 471 aa17.97■□□□□ 0.47
CALR-201ENST00000316448 LMOD1P29536 600 aaPredicted RBP17.97■□□□□ 0.47
CALR-201ENST00000316448 JAKMIP3Q5VZ66 844 aa17.97■□□□□ 0.47
CALR-201ENST00000316448 ZNF713Q8N859 430 aaPredicted RBP17.97■□□□□ 0.47
CALR-201ENST00000316448 KRI1Q8N9T8 703 aaKnown RBP17.97■□□□□ 0.47
CALR-201ENST00000316448 FAM200AQ8TCP9 573 aa17.97■□□□□ 0.47
CALR-201ENST00000316448 CCDC12Q8WUD4 166 aaPredicted RBP17.97■□□□□ 0.47
CALR-201ENST00000316448 GOPCQ9HD26 462 aa17.97■□□□□ 0.47
CALR-201ENST00000316448 ATAD5Q96QE3 1844 aa17.97■□□□□ 0.47
CALR-201ENST00000316448 FAM237AA0A1B0GTK4 181 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 CCDC194A0A1B0GVG4 234 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 GNA11P29992 359 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 TRAPPC10P48553 1259 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 IL17AQ16552 155 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 RESP18Q5W5W9 173 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 USP49Q70CQ1 688 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 FBXO28Q9NVF7 368 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 HPSEQ9Y251 543 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 SRPRBQ9Y5M8 271 aaKnown RBP17.96■□□□□ 0.47
CALR-201ENST00000316448 MORC2Q9Y6X9 1032 aaPredicted RBP17.96■□□□□ 0.47
CALR-201ENST00000316448 ADM5C9JUS6 153 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 MCM7P33993 719 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 IKQ13123 557 aaPredicted RBP17.96■□□□□ 0.47
CALR-201ENST00000316448 PTGDRQ13258 359 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 UBE2SQ16763 222 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 DCAF15Q66K64 600 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 TRIM44Q96DX7 344 aaPredicted RBP17.96■□□□□ 0.47
CALR-201ENST00000316448 RIC8AQ9NPQ8 531 aa17.96■□□□□ 0.47
CALR-201ENST00000316448 ADCY7P51828 1080 aa17.95■□□□□ 0.46
CALR-201ENST00000316448 PRKG1Q13976 671 aa17.95■□□□□ 0.46
CALR-201ENST00000316448 FAM43AQ8N2R8 423 aa17.95■□□□□ 0.46
CALR-201ENST00000316448 KLRG1Q96E93 195 aa17.95■□□□□ 0.46
CALR-201ENST00000316448 L3MBTL3Q96JM7 780 aaPredicted RBP17.95■□□□□ 0.46
CALR-201ENST00000316448 WRNIP1Q96S55 665 aa17.95■□□□□ 0.46
CALR-201ENST00000316448 PCDHA1Q9Y5I3 950 aa17.95■□□□□ 0.46
CALR-201ENST00000316448 USP2O75604 605 aaPredicted RBP17.94■□□□□ 0.46
CALR-201ENST00000316448 CLK2P49760 499 aaKnown RBP17.94■□□□□ 0.46
CALR-201ENST00000316448 ATP2C1P98194 919 aaPredicted RBP17.94■□□□□ 0.46
CALR-201ENST00000316448 ANO6Q4KMQ2 910 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 PPP1R18Q6NYC8 613 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 SASS6Q6UVJ0 657 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 CSRNP2Q9H175 543 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 TMEM60Q9H2L4 133 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 CEP131Q9UPN4 1083 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 PPP2R3BQ9Y5P8 575 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 PITPNM2Q9BZ72 1349 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 POTECB2RU33 542 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 ZNF202O95125 648 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 DPY19L2Q6NUT2 758 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 KRT25Q7Z3Z0 450 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 SCYL3Q8IZE3 742 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 REXO1Q8N1G1 1221 aaKnown RBP17.94■□□□□ 0.46
CALR-201ENST00000316448 P2RX7Q99572 595 aaKnown RBP17.94■□□□□ 0.46
CALR-201ENST00000316448 KIAA1683Q9H0B3 1180 aa17.94■□□□□ 0.46
CALR-201ENST00000316448 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.93■□□□□ 0.46
CALR-201ENST00000316448 CAVIN2O95810 425 aa17.93■□□□□ 0.46
CALR-201ENST00000316448 PTPRAP18433 802 aa17.93■□□□□ 0.46
CALR-201ENST00000316448 STAT2P52630 851 aa17.93■□□□□ 0.46
CALR-201ENST00000316448 HS1BP3Q53T59 392 aa17.93■□□□□ 0.46
CALR-201ENST00000316448 TBCKQ8TEA7 893 aa17.93■□□□□ 0.46
CALR-201ENST00000316448 ERCC4Q92889 916 aaPredicted RBP17.93■□□□□ 0.46
CALR-201ENST00000316448 EMILIN3Q9NT22 766 aa17.93■□□□□ 0.46
CALR-201ENST00000316448 GINM1Q9NU53 330 aa17.93■□□□□ 0.46
CALR-201ENST00000316448 USP25Q9UHP3 1055 aa17.93■□□□□ 0.46
CALR-201ENST00000316448 SMCHD1A6NHR9 2005 aa17.93■□□□□ 0.46
CALR-201ENST00000316448 USP17L15C9J2P7 530 aa17.92■□□□□ 0.46
CALR-201ENST00000316448 USP17L13C9JLJ4 530 aa17.92■□□□□ 0.46
CALR-201ENST00000316448 USP17L11C9JVI0 530 aa17.92■□□□□ 0.46
CALR-201ENST00000316448 USP17L18D6R9N7 530 aa17.92■□□□□ 0.46
CALR-201ENST00000316448 USP17L22D6RA61 530 aa17.92■□□□□ 0.46
CALR-201ENST00000316448 USP17L17D6RBQ6 530 aa17.92■□□□□ 0.46
CALR-201ENST00000316448 USP17L19D6RCP7 530 aa17.92■□□□□ 0.46
CALR-201ENST00000316448 USP17L20D6RJB6 530 aa17.92■□□□□ 0.46
CALR-201ENST00000316448 OPLAHO14841 1288 aa17.92■□□□□ 0.46
CALR-201ENST00000316448 USP17L24Q0WX57 530 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms