RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 CEP350Q5VT06 3117 aa21.61■■□□□ 1.05
CDK4-202ENST00000312990 MANSC4A6NHS7 340 aaPredicted RBP21.61■■□□□ 1.05
CDK4-202ENST00000312990 VWA5AO00534 786 aa21.61■■□□□ 1.05
CDK4-202ENST00000312990 PKP1Q13835 747 aa21.61■■□□□ 1.05
CDK4-202ENST00000312990 LARP1BQ659C4 914 aaKnown RBP21.61■■□□□ 1.05
CDK4-202ENST00000312990 PAXIP1Q6ZW49 1069 aaPredicted RBP21.61■■□□□ 1.05
CDK4-202ENST00000312990 ANKRD23Q86SG2 305 aa21.61■■□□□ 1.05
CDK4-202ENST00000312990 FAM43AQ8N2R8 423 aa21.61■■□□□ 1.05
CDK4-202ENST00000312990 ZIC5Q96T25 663 aa21.61■■□□□ 1.05
CDK4-202ENST00000312990 VPS54Q9P1Q0 977 aa21.61■■□□□ 1.05
CDK4-202ENST00000312990 ZNF536O15090 1300 aa21.61■■□□□ 1.05
CDK4-202ENST00000312990 IRX3P78415 501 aaPredicted RBP21.6■■□□□ 1.05
CDK4-202ENST00000312990 PABPC4Q13310 644 aaKnown RBP eCLIP21.6■■□□□ 1.054e-9■■□□□ 13.2
CDK4-202ENST00000312990 DEFB115Q30KQ5 88 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 OTUD7BQ6GQQ9 843 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 HEATR3Q7Z4Q2 680 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 REPS2Q8NFH8 660 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 P2RX7Q99572 595 aaKnown RBP21.6■■□□□ 1.05
CDK4-202ENST00000312990 BARHL2Q9NY43 387 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 HOXC10Q9NYD6 342 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 SLC45A1Q9Y2W3 748 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 STXBP3O00186 592 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 PDHXO00330 501 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 TAL1P17542 331 aaPredicted RBP21.6■■□□□ 1.05
CDK4-202ENST00000312990 PDCP20941 246 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 GRM1Q13255 1194 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 CCDC174Q6PII3 467 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 COA7Q96BR5 231 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 C8orf76Q96K31 380 aa21.6■■□□□ 1.05
CDK4-202ENST00000312990 IGF2BP3O00425 579 aaKnown RBP eCLIP21.59■■□□□ 1.05
CDK4-202ENST00000312990 HERVK_113P62684 666 aa21.59■■□□□ 1.05
CDK4-202ENST00000312990 HTRA3P83110 453 aa21.59■■□□□ 1.05
CDK4-202ENST00000312990 LBX2Q6XYB7 198 aa21.59■■□□□ 1.05
CDK4-202ENST00000312990 FBXO18Q8NFZ0 1043 aa21.59■■□□□ 1.05
CDK4-202ENST00000312990 CAPNS2Q96L46 248 aa21.59■■□□□ 1.05
CDK4-202ENST00000312990 hCG_1984214I3L0E3 225 aa21.58■■□□□ 1.05
CDK4-202ENST00000312990 STX6O43752 255 aa21.58■■□□□ 1.05
CDK4-202ENST00000312990 FDX1P10109 184 aa21.58■■□□□ 1.05
CDK4-202ENST00000312990 GUCY1B3Q02153 619 aa21.58■■□□□ 1.05
CDK4-202ENST00000312990 FBXO11Q86XK2 927 aa21.58■■□□□ 1.05
CDK4-202ENST00000312990 ZNF713Q8N859 430 aaPredicted RBP21.58■■□□□ 1.05
CDK4-202ENST00000312990 AMNQ9BXJ7 453 aa21.58■■□□□ 1.05
CDK4-202ENST00000312990 THSD7BQ9C0I4 1608 aa21.58■■□□□ 1.04
CDK4-202ENST00000312990 ZNFX1Q9P2E3 1918 aaKnown RBP21.58■■□□□ 1.04
CDK4-202ENST00000312990 ICAM1P05362 532 aa21.57■■□□□ 1.04
CDK4-202ENST00000312990 CYP2C8P10632 490 aa21.57■■□□□ 1.04
CDK4-202ENST00000312990 OSBPP22059 807 aa21.57■■□□□ 1.04
CDK4-202ENST00000312990 USH1GQ495M9 461 aa21.57■■□□□ 1.04
CDK4-202ENST00000312990 KRT40Q6A162 431 aa21.57■■□□□ 1.04
CDK4-202ENST00000312990 SH3GLB2Q9NR46 395 aa21.57■■□□□ 1.04
CDK4-202ENST00000312990 PNMA3Q9UL41 463 aa21.57■■□□□ 1.04
CDK4-202ENST00000312990 ZNF214Q9UL59 606 aaPredicted RBP21.57■■□□□ 1.04
CDK4-202ENST00000312990 KCNJ14Q9UNX9 436 aa21.57■■□□□ 1.04
CDK4-202ENST00000312990 MTMR6Q9Y217 621 aa21.57■■□□□ 1.04
CDK4-202ENST00000312990 PCDHA1Q9Y5I3 950 aa21.57■■□□□ 1.04
CDK4-202ENST00000312990 ZBED4O75132 1171 aa21.56■■□□□ 1.04
CDK4-202ENST00000312990 TMEM132BQ14DG7 1078 aa21.56■■□□□ 1.04
CDK4-202ENST00000312990 NPY5RQ15761 445 aa21.56■■□□□ 1.04
CDK4-202ENST00000312990 AGBL1Q96MI9 1066 aa21.56■■□□□ 1.04
CDK4-202ENST00000312990 PHF20Q9BVI0 1012 aa21.56■■□□□ 1.04
CDK4-202ENST00000312990 RAVER2Q9HCJ3 691 aaKnown RBP21.56■■□□□ 1.04
CDK4-202ENST00000312990 MYH7BA7E2Y1 1941 aa21.56■■□□□ 1.04
CDK4-202ENST00000312990 PEX10O60683 326 aa21.56■■□□□ 1.04
CDK4-202ENST00000312990 NAPAP54920 295 aa21.56■■□□□ 1.04
CDK4-202ENST00000312990 KIF23Q02241 960 aaPredicted RBP21.56■■□□□ 1.04
CDK4-202ENST00000312990 NOGQ13253 232 aa21.56■■□□□ 1.04
CDK4-202ENST00000312990 CPXCR1Q8N123 301 aa21.56■■□□□ 1.04
CDK4-202ENST00000312990 RGS22Q8NE09 1264 aa21.56■■□□□ 1.04
CDK4-202ENST00000312990 ZDHHC9Q9Y397 364 aa21.56■■□□□ 1.04
CDK4-202ENST00000312990 LCTP09848 1927 aa21.55■■□□□ 1.04
CDK4-202ENST00000312990 DOCK3Q8IZD9 2030 aa21.55■■□□□ 1.04
CDK4-202ENST00000312990 VPS37CA5D8V6 355 aaPredicted RBP21.55■■□□□ 1.04
CDK4-202ENST00000312990 H3BQV1 296 aa21.55■■□□□ 1.04
CDK4-202ENST00000312990 AOC2O75106 756 aa21.55■■□□□ 1.04
CDK4-202ENST00000312990 XBP1P17861 261 aa21.55■■□□□ 1.04
CDK4-202ENST00000312990 INHBEP58166 350 aa21.55■■□□□ 1.04
CDK4-202ENST00000312990 SREBF2Q12772 1141 aa21.55■■□□□ 1.04
CDK4-202ENST00000312990 IFFO2Q5TF58 517 aa21.55■■□□□ 1.04
CDK4-202ENST00000312990 IFNL1Q8IU54 200 aa21.55■■□□□ 1.04
CDK4-202ENST00000312990 BTBD7Q9P203 1132 aa21.55■■□□□ 1.04
CDK4-202ENST00000312990 CIZ1Q9ULV3 898 aaPredicted RBP21.55■■□□□ 1.04
CDK4-202ENST00000312990 ATP2A1O14983 1001 aa21.54■■□□□ 1.04
CDK4-202ENST00000312990 ADAMTS3O15072 1205 aa21.54■■□□□ 1.04
CDK4-202ENST00000312990 CNMDO75829 334 aa21.54■■□□□ 1.04
CDK4-202ENST00000312990 MMP1P03956 469 aa21.54■■□□□ 1.04
CDK4-202ENST00000312990 TM4SF4P48230 202 aa21.54■■□□□ 1.04
CDK4-202ENST00000312990 OAZ1P54368 228 aa21.54■■□□□ 1.04
CDK4-202ENST00000312990 TRIM29Q14134 588 aa21.54■■□□□ 1.04
CDK4-202ENST00000312990 PPP1R18Q6NYC8 613 aa21.54■■□□□ 1.04
CDK4-202ENST00000312990 MB21D1Q8N884 522 aa21.54■■□□□ 1.04
CDK4-202ENST00000312990 CCDC148Q8NFR7 591 aa21.54■■□□□ 1.04
CDK4-202ENST00000312990 ZMYND12Q9H0C1 365 aa21.54■■□□□ 1.04
CDK4-202ENST00000312990 TXNRD2Q9NNW7 524 aa21.54■■□□□ 1.04
CDK4-202ENST00000312990 ZCCHC17Q9NP64 241 aaKnown RBP21.54■■□□□ 1.04
CDK4-202ENST00000312990 CCPG1Q9ULG6 757 aa21.54■■□□□ 1.04
CDK4-202ENST00000312990 BRD1O95696 1058 aa21.53■■□□□ 1.04
CDK4-202ENST00000312990 FAM177A1Q8N128 213 aaPredicted RBP21.53■■□□□ 1.04
CDK4-202ENST00000312990 CCDC12Q8WUD4 166 aaPredicted RBP21.53■■□□□ 1.04
CDK4-202ENST00000312990 RBPJLQ9UBG7 517 aa21.53■■□□□ 1.04
CDK4-202ENST00000312990 CTDP1Q9Y5B0 961 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms