RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 BEGAINQ9BUH8 593 aa18.19■□□□□ 0.5
TUBA3E-201ENST00000312988 RNF26Q9BY78 433 aaPredicted RBP18.19■□□□□ 0.5
TUBA3E-201ENST00000312988 RAVER2Q9HCJ3 691 aaKnown RBP18.19■□□□□ 0.5
TUBA3E-201ENST00000312988 CPA4Q9UI42 421 aa18.19■□□□□ 0.5
TUBA3E-201ENST00000312988 PNMA6FA0A0J9YX94 578 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 TRPA1O75762 1119 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 FMNL1O95466 1100 aaPredicted RBP18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 CTDNEP1O95476 244 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 MAP2K1Q02750 393 aaPredicted RBP18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 ANKRD13CQ8N6S4 541 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 NSUN7Q8NE18 718 aaKnown RBP18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 DDX11Q96FC9 970 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 LLPHQ9BRT6 129 aaKnown RBP18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 RNF186Q9NXI6 227 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 BTBD7Q9P203 1132 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 RBM27Q9P2N5 1060 aaKnown RBP18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 ADAMTS5Q9UNA0 930 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 RABGAP1Q9Y3P9 1069 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 RBM19Q9Y4C8 960 aaKnown RBP18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 PRPF3O43395 683 aaKnown RBP18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 JAK2O60674 1132 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 PEX10O60683 326 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 TMEM132BQ14DG7 1078 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 USH1GQ495M9 461 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 FBXO11Q86XK2 927 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 DNAJC5GQ8N7S2 189 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 MTMR8Q96EF0 704 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 FOXD4L1Q9NU39 408 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 ORC3Q9UBD5 711 aaPredicted RBP18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 RBPJLQ9UBG7 517 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 CCPG1Q9ULG6 757 aa18.18■□□□□ 0.5
TUBA3E-201ENST00000312988 TLR2O60603 784 aa18.17■□□□□ 0.5
TUBA3E-201ENST00000312988 TBC1D8O95759 1140 aa18.17■□□□□ 0.5
TUBA3E-201ENST00000312988 OAZ1P54368 228 aa18.17■□□□□ 0.5
TUBA3E-201ENST00000312988 CUL4AQ13619 759 aa18.17■□□□□ 0.5
TUBA3E-201ENST00000312988 SNRNP48Q6IEG0 339 aaKnown RBP18.17■□□□□ 0.5
TUBA3E-201ENST00000312988 HEATR3Q7Z4Q2 680 aa18.17■□□□□ 0.5
TUBA3E-201ENST00000312988 REPS2Q8NFH8 660 aa18.17■□□□□ 0.5
TUBA3E-201ENST00000312988 GPRC5AQ8NFJ5 357 aa18.17■□□□□ 0.5
TUBA3E-201ENST00000312988 AGBL1Q96MI9 1066 aa18.17■□□□□ 0.5
TUBA3E-201ENST00000312988 AMNQ9BXJ7 453 aa18.17■□□□□ 0.5
TUBA3E-201ENST00000312988 TEX13BQ9BXU2 312 aa18.17■□□□□ 0.5
TUBA3E-201ENST00000312988 TXNRD2Q9NNW7 524 aa18.17■□□□□ 0.5
TUBA3E-201ENST00000312988 SMC3Q9UQE7 1217 aa18.17■□□□□ 0.5
TUBA3E-201ENST00000312988 MYH6P13533 1939 aa18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 COL11A1P12107 1806 aaPredicted RBP18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 CNMDO75829 334 aa18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 DEXIO95424 95 aa18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 ICAM1P05362 532 aa18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 STAT3P40763 770 aa18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 ERVK-9P63128 1117 aa18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 ERVK-24P63145 666 aa18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 HMGN5P82970 282 aaKnown RBP18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 POTEEQ6S8J3 1075 aa18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 CCAR1Q8IX12 1150 aaKnown RBP18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 FAM184AQ8NB25 1140 aa18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 SPATC1LQ9H0A9 340 aa18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 PNMA2Q9UL42 364 aa18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 STK36Q9NRP7 1315 aa18.16■□□□□ 0.5
TUBA3E-201ENST00000312988 ALAS1P13196 640 aa18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 SCG2P13521 617 aa18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 TAL1P17542 331 aaPredicted RBP18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 TRAF1Q13077 416 aa18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 SPRYD3Q8NCJ5 442 aa18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 WASF1Q92558 559 aa18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 GPKOWQ92917 476 aaPredicted RBP eCLIP18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 CWC22Q9HCG8 908 aaKnown RBP18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 HOMER2Q9NSB8 354 aa18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 DAXXQ9UER7 740 aaPredicted RBP18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 ZNF214Q9UL59 606 aaPredicted RBP18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 PCDHA1Q9Y5I3 950 aa18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 ZNF536O15090 1300 aa18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 ADGRA2Q96PE1 1338 aa18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 A0A0G2JMZ2 1700 aa18.15■□□□□ 0.5
TUBA3E-201ENST00000312988 ATP2A1O14983 1001 aa18.14■□□□□ 0.49
TUBA3E-201ENST00000312988 PPP1R11O60927 126 aaPredicted RBP18.14■□□□□ 0.49
TUBA3E-201ENST00000312988 CCNA1P78396 465 aa18.14■□□□□ 0.49
TUBA3E-201ENST00000312988 PFKFB3Q16875 520 aaPredicted RBP18.14■□□□□ 0.49
TUBA3E-201ENST00000312988 FAM110CQ1W6H9 321 aa18.14■□□□□ 0.49
TUBA3E-201ENST00000312988 WDR78Q5VTH9 848 aa18.14■□□□□ 0.49
TUBA3E-201ENST00000312988 NCAPG2Q86XI2 1143 aa18.14■□□□□ 0.49
TUBA3E-201ENST00000312988 SMARCC2Q8TAQ2 1214 aa18.14■□□□□ 0.49
TUBA3E-201ENST00000312988 COA7Q96BR5 231 aa18.14■□□□□ 0.49
TUBA3E-201ENST00000312988 MORF4L1Q9UBU8 362 aa18.14■□□□□ 0.49
TUBA3E-201ENST00000312988 FOSBP53539 338 aa18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 PKN1Q16512 942 aa18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 Q3C1V9 767 aa18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 WWC2Q6AWC2 1192 aa18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 C17orf99Q6UX52 265 aa18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 ALG1Q9BT22 464 aa18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 MOV10L1Q9BXT6 1211 aaKnown RBP18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 R3HDMLQ9H3Y0 253 aa18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 SAGE1Q9NXZ1 904 aa18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 KIF3AQ9Y496 699 aa18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 ABCB11O95342 1321 aa18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 ECM2O94769 699 aaPredicted RBP18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 SLC25A27O95847 323 aa18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 BCRP11274 1271 aa18.13■□□□□ 0.49
TUBA3E-201ENST00000312988 FDPSP14324 419 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms