RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 DYMQ7RTS9 669 aa6.27□□□□□ -1.41
CKS1B-201ENST00000308987 ATCAYQ86WG3 371 aa6.27□□□□□ -1.41
CKS1B-201ENST00000308987 LRRN4CLQ8ND94 238 aa6.27□□□□□ -1.41
CKS1B-201ENST00000308987 BHLHE22Q8NFJ8 381 aaPredicted RBP6.27□□□□□ -1.41
CKS1B-201ENST00000308987 PI4K2BQ8TCG2 481 aa6.27□□□□□ -1.41
CKS1B-201ENST00000308987 PMEPA1Q969W9 287 aa6.27□□□□□ -1.41
CKS1B-201ENST00000308987 ZKSCAN3Q9BRR0 538 aa6.27□□□□□ -1.41
CKS1B-201ENST00000308987 POLR3GLQ9BT43 218 aa6.27□□□□□ -1.41
CKS1B-201ENST00000308987 CHRDQ9H2X0 955 aa6.27□□□□□ -1.41
CKS1B-201ENST00000308987 FAM105AQ9NUU6 356 aa6.27□□□□□ -1.41
CKS1B-201ENST00000308987 ZBTB1Q9Y2K1 713 aa6.27□□□□□ -1.41
CKS1B-201ENST00000308987 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.26□□□□□ -1.41
CKS1B-201ENST00000308987 AAMPQ13685 434 aa6.26□□□□□ -1.41
CKS1B-201ENST00000308987 AMOTQ4VCS5 1084 aa6.26□□□□□ -1.41
CKS1B-201ENST00000308987 LCNL1Q6ZST4 164 aa6.26□□□□□ -1.41
CKS1B-201ENST00000308987 NGEFQ8N5V2 710 aa6.26□□□□□ -1.41
CKS1B-201ENST00000308987 TOX2Q96NM4 488 aa6.26□□□□□ -1.41
CKS1B-201ENST00000308987 NRSN2Q9GZP1 204 aa6.26□□□□□ -1.41
CKS1B-201ENST00000308987 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.26□□□□□ -1.41
CKS1B-201ENST00000308987 COL15A1P39059 1388 aa6.26□□□□□ -1.41
CKS1B-201ENST00000308987 NPC1L1Q9UHC9 1359 aa6.26□□□□□ -1.41
CKS1B-201ENST00000308987 KDM2BQ8NHM5 1336 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 GLTPD2A6NH11 291 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 LRRC10BA6NIK2 292 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 B8ZZF3 427 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 RNMTO43148 476 aaKnown RBP6.25□□□□□ -1.41
CKS1B-201ENST00000308987 RPLP1P05386 114 aaKnown RBP6.25□□□□□ -1.41
CKS1B-201ENST00000308987 RAP1GAPP47736 663 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 C1orf141Q5JVX7 400 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 TMEM164Q5U3C3 297 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 C1QL4Q86Z23 238 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 PLD6Q8N2A8 252 aaKnown RBP6.25□□□□□ -1.41
CKS1B-201ENST00000308987 ASAP3Q8TDY4 903 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 EDEM1Q92611 657 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 KRTAP9-3Q9BYQ3 159 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 SLC52A2Q9HAB3 445 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 NARFQ9UHQ1 456 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 SCN4AP35499 1836 aa6.25□□□□□ -1.41
CKS1B-201ENST00000308987 ADAMTSL1Q8N6G6 1762 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 COL3A1P02461 1466 aaPredicted RBP6.24□□□□□ -1.41
CKS1B-201ENST00000308987 A6NHS1 94 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 SERPINB2P05120 415 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 CTSBP07858 339 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 HSPA1AP0DMV8 641 aaKnown RBP6.24□□□□□ -1.41
CKS1B-201ENST00000308987 HSPA1BP0DMV9 641 aaKnown RBP6.24□□□□□ -1.41
CKS1B-201ENST00000308987 LMNB1P20700 586 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 CD96P40200 585 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 ASPAP45381 313 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 MTHFSDQ2M296 383 aaKnown RBP6.24□□□□□ -1.41
CKS1B-201ENST00000308987 CYP27C1Q4G0S4 372 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 AKAP4Q5JQC9 854 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 MORC1Q86VD1 984 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 C16orf71Q8IYS4 520 aaPredicted RBP6.24□□□□□ -1.41
CKS1B-201ENST00000308987 SMC1BQ8NDV3 1235 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 NETO1Q8TDF5 533 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 VAV3Q9UKW4 847 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 DLG5Q8TDM6 1919 aa6.24□□□□□ -1.41
CKS1B-201ENST00000308987 NUP98P52948 1817 aa6.23□□□□□ -1.41
CKS1B-201ENST00000308987 HMOX1P09601 288 aa6.23□□□□□ -1.41
CKS1B-201ENST00000308987 VEGFAP15692 232 aaPredicted RBP6.23□□□□□ -1.41
CKS1B-201ENST00000308987 MAOBP27338 520 aa6.23□□□□□ -1.41
CKS1B-201ENST00000308987 DEKP35659 375 aaKnown RBP6.23□□□□□ -1.41
CKS1B-201ENST00000308987 BUD31P41223 144 aaPredicted RBP6.23□□□□□ -1.41
CKS1B-201ENST00000308987 EIF5P55010 431 aaKnown RBP6.23□□□□□ -1.41
CKS1B-201ENST00000308987 ELOAQ14241 798 aaKnown RBP6.23□□□□□ -1.41
CKS1B-201ENST00000308987 TBC1D9BQ66K14 1250 aa6.23□□□□□ -1.41
CKS1B-201ENST00000308987 C2CD5Q86YS7 1000 aa6.23□□□□□ -1.41
CKS1B-201ENST00000308987 TTLL6Q8N841 843 aa6.23□□□□□ -1.41
CKS1B-201ENST00000308987 FAM181AQ8N9Y4 354 aa6.23□□□□□ -1.41
CKS1B-201ENST00000308987 ZSCAN18Q8TBC5 510 aaPredicted RBP6.23□□□□□ -1.41
CKS1B-201ENST00000308987 BACH2Q9BYV9 841 aa6.23□□□□□ -1.41
CKS1B-201ENST00000308987 BHLHE41Q9C0J9 482 aaPredicted RBP6.23□□□□□ -1.41
CKS1B-201ENST00000308987 GSX1Q9H4S2 264 aaPredicted RBP6.23□□□□□ -1.41
CKS1B-201ENST00000308987 SEPT3Q9UH03 358 aa6.23□□□□□ -1.41
CKS1B-201ENST00000308987 DAGLAQ9Y4D2 1042 aa6.23□□□□□ -1.41
CKS1B-201ENST00000308987 TRPM7Q96QT4 1865 aa6.22□□□□□ -1.41
CKS1B-201ENST00000308987 EREGO14944 169 aa6.22□□□□□ -1.41
CKS1B-201ENST00000308987 KCNQ3O43525 872 aa6.22□□□□□ -1.41
CKS1B-201ENST00000308987 EIF4EBP3O60516 100 aaPredicted RBP6.22□□□□□ -1.41
CKS1B-201ENST00000308987 ATP2B4P23634 1241 aa6.22□□□□□ -1.41
CKS1B-201ENST00000308987 CANXP27824 592 aaKnown RBP6.22□□□□□ -1.41
CKS1B-201ENST00000308987 PRKCQQ04759 706 aa6.22□□□□□ -1.41
CKS1B-201ENST00000308987 MLANAQ16655 118 aa6.22□□□□□ -1.41
CKS1B-201ENST00000308987 PRR5LQ6MZQ0 368 aa6.22□□□□□ -1.41
CKS1B-201ENST00000308987 SIAH1Q8IUQ4 282 aa6.22□□□□□ -1.41
CKS1B-201ENST00000308987 LRRC56Q8IYG6 542 aaPredicted RBP6.22□□□□□ -1.41
CKS1B-201ENST00000308987 IL17REQ8NFR9 667 aa6.22□□□□□ -1.41
CKS1B-201ENST00000308987 EXOC6Q8TAG9 804 aa6.22□□□□□ -1.41
CKS1B-201ENST00000308987 ZNF496Q96IT1 587 aaPredicted RBP6.22□□□□□ -1.41
CKS1B-201ENST00000308987 RAD18Q9NS91 495 aa6.22□□□□□ -1.41
CKS1B-201ENST00000308987 FAM53CQ9NYF3 392 aa6.22□□□□□ -1.41
CKS1B-201ENST00000308987 POLR2AP24928 1970 aaKnown RBP6.22□□□□□ -1.41
CKS1B-201ENST00000308987 LTBP1Q14766 1721 aa6.22□□□□□ -1.41
CKS1B-201ENST00000308987 COL4A5P29400 1685 aa6.21□□□□□ -1.42
CKS1B-201ENST00000308987 ZNF503-AS2A6NEH8 195 aa6.21□□□□□ -1.42
CKS1B-201ENST00000308987 CAMTA2O94983 1202 aa6.21□□□□□ -1.42
CKS1B-201ENST00000308987 A1BGP04217 495 aa6.21□□□□□ -1.42
CKS1B-201ENST00000308987 EDN3P14138 238 aa6.21□□□□□ -1.42
CKS1B-201ENST00000308987 OLFM4Q6UX06 510 aa6.21□□□□□ -1.42
CKS1B-201ENST00000308987 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms