RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 POTEDQ86YR6 584 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 IRF2BP1Q8IU81 584 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 SPATA4Q8NEY3 305 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 NOC4LQ9BVI4 516 aaKnown RBP16.36■□□□□ 0.21
COL6A2-201ENST00000300527 NFU1Q9UMS0 254 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 AFDNP55196 1824 aaKnown RBP16.35■□□□□ 0.21
COL6A2-201ENST00000300527 TARSL2A2RTX5 802 aaKnown RBP16.35■□□□□ 0.21
COL6A2-201ENST00000300527 PSMA7O14818 248 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 PDE8BO95263 885 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 BCAMP50895 628 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 HLFQ16534 295 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 GIMAP7Q8NHV1 300 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 RMND1Q9NWS8 449 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 H7C1D1 291 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 SUGP1Q8IWZ8 645 aaKnown RBP16.35■□□□□ 0.21
COL6A2-201ENST00000300527 PROCA1Q8NCQ7 364 aaPredicted RBP16.35■□□□□ 0.21
COL6A2-201ENST00000300527 ZIM3Q96PE6 472 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 NUTM2BA6NNL0 878 aaPredicted RBP16.35■□□□□ 0.21
COL6A2-201ENST00000300527 NUTM2EB1AL46 878 aaPredicted RBP16.35■□□□□ 0.21
COL6A2-201ENST00000300527 GOLGA8KD6RF30 607 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 NMT2O60551 498 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 PKN1Q16512 942 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 TDRD12Q587J7 1177 aaKnown RBP16.35■□□□□ 0.21
COL6A2-201ENST00000300527 CT47A1Q5JQC4 288 aaPredicted RBP16.35■□□□□ 0.21
COL6A2-201ENST00000300527 DNAJC10Q8IXB1 793 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 ESR2Q92731 530 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 GPKOWQ92917 476 aaPredicted RBP eCLIP16.35■□□□□ 0.21
COL6A2-201ENST00000300527 RPGRIP1Q96KN7 1286 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 EXOC1Q9NV70 894 aa16.35■□□□□ 0.21
COL6A2-201ENST00000300527 UBA7P41226 1012 aa16.34■□□□□ 0.21
COL6A2-201ENST00000300527 GUCY2DQ02846 1103 aa16.34■□□□□ 0.21
COL6A2-201ENST00000300527 CAPN11Q9UMQ6 739 aa16.34■□□□□ 0.21
COL6A2-201ENST00000300527 C5P01031 1676 aa16.34■□□□□ 0.21
COL6A2-201ENST00000300527 TCRBV5S4A2TA0A5A2 114 aa16.34■□□□□ 0.21
COL6A2-201ENST00000300527 ATP6V1AP38606 617 aa16.34■□□□□ 0.21
COL6A2-201ENST00000300527 HLTFQ14527 1009 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL6A2-201ENST00000300527 AMOTL1Q8IY63 956 aa16.34■□□□□ 0.21
COL6A2-201ENST00000300527 AENQ8WTP8 325 aaKnown RBP16.34■□□□□ 0.21
COL6A2-201ENST00000300527 RNPC3Q96LT9 517 aaKnown RBP16.34■□□□□ 0.21
COL6A2-201ENST00000300527 RNF26Q9BY78 433 aaPredicted RBP16.34■□□□□ 0.21
COL6A2-201ENST00000300527 TANGO6Q9C0B7 1094 aa16.34■□□□□ 0.21
COL6A2-201ENST00000300527 GRIN2DO15399 1336 aa16.34■□□□□ 0.21
COL6A2-201ENST00000300527 E7EVH7 732 aa16.33■□□□□ 0.21
COL6A2-201ENST00000300527 NKRFO15226 690 aaKnown RBP eCLIP16.33■□□□□ 0.21
COL6A2-201ENST00000300527 CPP00450 1065 aa16.33■□□□□ 0.21
COL6A2-201ENST00000300527 ARID5AQ03989 594 aa16.33■□□□□ 0.21
COL6A2-201ENST00000300527 IL17AQ16552 155 aa16.33■□□□□ 0.21
COL6A2-201ENST00000300527 FAM47AQ5JRC9 791 aa16.33■□□□□ 0.21
COL6A2-201ENST00000300527 TMTC2Q8N394 836 aa16.33■□□□□ 0.21
COL6A2-201ENST00000300527 EPB41L5Q9HCM4 733 aa16.33■□□□□ 0.21
COL6A2-201ENST00000300527 SNX12Q9UMY4 172 aa16.33■□□□□ 0.21
COL6A2-201ENST00000300527 FRMD3A2A2Y4 597 aa16.33■□□□□ 0.2
COL6A2-201ENST00000300527 UQCRFS1P1P0C7P4 283 aa16.33■□□□□ 0.2
COL6A2-201ENST00000300527 VAV2P52735 878 aa16.33■□□□□ 0.2
COL6A2-201ENST00000300527 PDXDC2PQ6P474 469 aa16.33■□□□□ 0.2
COL6A2-201ENST00000300527 CABS1Q96KC9 395 aa16.33■□□□□ 0.2
COL6A2-201ENST00000300527 PHF20Q9BVI0 1012 aa16.33■□□□□ 0.2
COL6A2-201ENST00000300527 RNF41Q9H4P4 317 aaPredicted RBP16.33■□□□□ 0.2
COL6A2-201ENST00000300527 LRRC10BA6NIK2 292 aa16.33■□□□□ 0.2
COL6A2-201ENST00000300527 CARSP49589 748 aaKnown RBP16.33■□□□□ 0.2
COL6A2-201ENST00000300527 ENAHQ8N8S7 591 aaPredicted RBP16.33■□□□□ 0.2
COL6A2-201ENST00000300527 CNOT6LQ96LI5 555 aaKnown RBP16.33■□□□□ 0.2
COL6A2-201ENST00000300527 ISCA1Q9BUE6 129 aa16.33■□□□□ 0.2
COL6A2-201ENST00000300527 RBM12Q9NTZ6 932 aaKnown RBP16.33■□□□□ 0.2
COL6A2-201ENST00000300527 MST1RQ04912 1400 aa16.33■□□□□ 0.2
COL6A2-201ENST00000300527 SHOX2O60902 331 aaPredicted RBP16.32■□□□□ 0.2
COL6A2-201ENST00000300527 FAM153BP0C7A2 387 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 FECHP22830 423 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 ASIC1P78348 528 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 FAM153CQ494X1 144 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 TICAM2Q86XR7 235 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 CREG2Q8IUH2 290 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 ZBTB38Q8NAP3 1195 aaPredicted RBP16.32■□□□□ 0.2
COL6A2-201ENST00000300527 SCLT1Q96NL6 688 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 OSBPL9Q96SU4 736 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 DNAJC7Q99615 494 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 FAM153AQ9UHL3 310 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 MAP3K15Q6ZN16 1313 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 PCCAP05165 728 aaPredicted RBP16.32■□□□□ 0.2
COL6A2-201ENST00000300527 EIF4A3P38919 411 aaKnown RBP16.32■□□□□ 0.2
COL6A2-201ENST00000300527 DNM2P50570 870 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 RASSF7Q02833 373 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 B4GALNT4Q76KP1 1039 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 KLHL7Q8IXQ5 586 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 STIM2Q9P246 746 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 PACSIN2Q9UNF0 486 aaPredicted RBP16.32■□□□□ 0.2
COL6A2-201ENST00000300527 BMP15O95972 392 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 CTSWP56202 376 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 ATP2C1P98194 919 aaPredicted RBP16.32■□□□□ 0.2
COL6A2-201ENST00000300527 PDE4DQ08499 809 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 ODF2Q5BJF6 829 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 RRAGAQ7L523 313 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 ALS2CR12Q96Q35 445 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 CEP89Q96ST8 783 aa16.32■□□□□ 0.2
COL6A2-201ENST00000300527 SLC5A1P13866 664 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 MAGEA1P43355 309 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 EPHB4P54760 987 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 PROSER2Q86WR7 435 aaPredicted RBP16.31■□□□□ 0.2
COL6A2-201ENST00000300527 STAG1Q8WVM7 1258 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 PCDHA13Q9Y5I0 950 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms