RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PPP2R3BQ9Y5P8 575 aa17.94■□□□□ 0.46
HERPUD1-201ENST00000300302 FAM237AA0A1B0GTK4 181 aa17.93■□□□□ 0.46
HERPUD1-201ENST00000300302 TMEM232C9JQI7 657 aa17.93■□□□□ 0.46
HERPUD1-201ENST00000300302 ADAMTS3O15072 1205 aa17.93■□□□□ 0.46
HERPUD1-201ENST00000300302 CTNND1O60716 968 aaKnown RBP17.93■□□□□ 0.46
HERPUD1-201ENST00000300302 ZNF202O95125 648 aa17.93■□□□□ 0.46
HERPUD1-201ENST00000300302 SYKP43405 635 aa17.93■□□□□ 0.46
HERPUD1-201ENST00000300302 NONOQ15233 471 aaKnown RBP eCLIP17.93■□□□□ 0.46
HERPUD1-201ENST00000300302 BTNL9Q6UXG8 535 aa17.93■□□□□ 0.46
HERPUD1-201ENST00000300302 NUP88Q99567 741 aaPredicted RBP17.93■□□□□ 0.46
HERPUD1-201ENST00000300302 SDF4Q9BRK5 362 aa17.93■□□□□ 0.46
HERPUD1-201ENST00000300302 GLT8D2Q9H1C3 349 aa17.93■□□□□ 0.46
HERPUD1-201ENST00000300302 HPSEQ9Y251 543 aa17.93■□□□□ 0.46
HERPUD1-201ENST00000300302 ATP2C1P98194 919 aaPredicted RBP17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 CDC37Q16543 378 aaPredicted RBP17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 QRICH1Q2TAL8 776 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 SYDE2Q5VT97 1194 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 CKAP2LQ8IYA6 745 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 SPICE1Q8N0Z3 855 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 TIGD1Q96MW7 591 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 FUCA2Q9BTY2 467 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 VCPKMTQ9H867 229 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 RIC8AQ9NPQ8 531 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 ATAD5Q96QE3 1844 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 PPP1R11O60927 126 aaPredicted RBP17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 MCM7P33993 719 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 STAT2P52630 851 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 MRPL12P52815 198 aaKnown RBP17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 PTGDRQ13258 359 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 NBPF12Q5TAG4 269 aaPredicted RBP17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 SASS6Q6UVJ0 657 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 CUL5Q93034 780 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 ZNF341Q9BYN7 854 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 GGA3Q9NZ52 723 aa17.92■□□□□ 0.46
HERPUD1-201ENST00000300302 INF2Q27J81 1249 aa17.91■□□□□ 0.46
HERPUD1-201ENST00000300302 ANP32BQ92688 251 aaKnown RBP17.91■□□□□ 0.46
HERPUD1-201ENST00000300302 FEZ1Q99689 392 aa17.91■□□□□ 0.46
HERPUD1-201ENST00000300302 ADARB2Q9NS39 739 aaKnown RBP17.91■□□□□ 0.46
HERPUD1-201ENST00000300302 KCNH3Q9ULD8 1083 aa17.91■□□□□ 0.46
HERPUD1-201ENST00000300302 PCDHA1Q9Y5I3 950 aa17.91■□□□□ 0.46
HERPUD1-201ENST00000300302 WNT7AO00755 349 aa17.9■□□□□ 0.46
HERPUD1-201ENST00000300302 TRAF1Q13077 416 aa17.9■□□□□ 0.46
HERPUD1-201ENST00000300302 ARL6IP4Q66PJ3 421 aaKnown RBP17.9■□□□□ 0.46
HERPUD1-201ENST00000300302 CHURC1Q8WUH1 139 aa17.9■□□□□ 0.46
HERPUD1-201ENST00000300302 AMNQ9BXJ7 453 aa17.9■□□□□ 0.46
HERPUD1-201ENST00000300302 BIN2Q9UBW5 565 aaPredicted RBP17.9■□□□□ 0.46
HERPUD1-201ENST00000300302 PITPNM2Q9BZ72 1349 aa17.9■□□□□ 0.46
HERPUD1-201ENST00000300302 HIRAP54198 1017 aaPredicted RBP17.9■□□□□ 0.46
HERPUD1-201ENST00000300302 TYRO3Q06418 890 aa17.9■□□□□ 0.46
HERPUD1-201ENST00000300302 NEK8Q86SG6 692 aa17.9■□□□□ 0.46
HERPUD1-201ENST00000300302 CSRNP2Q9H175 543 aa17.9■□□□□ 0.46
HERPUD1-201ENST00000300302 PSTPIP2Q9H939 334 aa17.9■□□□□ 0.46
HERPUD1-201ENST00000300302 LAD1O00515 517 aa17.89■□□□□ 0.45
HERPUD1-201ENST00000300302 ORC2Q13416 577 aaPredicted RBP17.89■□□□□ 0.45
HERPUD1-201ENST00000300302 FAM83BQ5T0W9 1011 aa17.89■□□□□ 0.45
HERPUD1-201ENST00000300302 JAKMIP3Q5VZ66 844 aa17.89■□□□□ 0.45
HERPUD1-201ENST00000300302 DPY19L2Q6NUT2 758 aa17.89■□□□□ 0.45
HERPUD1-201ENST00000300302 FAM160B2Q86V87 743 aa17.89■□□□□ 0.45
HERPUD1-201ENST00000300302 FBXO11Q86XK2 927 aa17.89■□□□□ 0.45
HERPUD1-201ENST00000300302 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.89■□□□□ 0.45
HERPUD1-201ENST00000300302 PRR12Q9ULL5 1215 aa17.89■□□□□ 0.45
HERPUD1-201ENST00000300302 MRVI1Q9Y6F6 885 aa17.89■□□□□ 0.45
HERPUD1-201ENST00000300302 PLA2G6O60733 806 aa17.88■□□□□ 0.45
HERPUD1-201ENST00000300302 GRIN1Q05586 938 aa17.88■□□□□ 0.45
HERPUD1-201ENST00000300302 ZYXQ15942 572 aaKnown RBP17.88■□□□□ 0.45
HERPUD1-201ENST00000300302 SUPT20HL1Q3ZLR7 823 aa17.88■□□□□ 0.45
HERPUD1-201ENST00000300302 RNF214Q8ND24 703 aa17.88■□□□□ 0.45
HERPUD1-201ENST00000300302 KIAA1755Q5JYT7 1200 aa17.88■□□□□ 0.45
HERPUD1-201ENST00000300302 SPECC1Q5M775 1068 aa17.88■□□□□ 0.45
HERPUD1-201ENST00000300302 TBCKQ8TEA7 893 aa17.88■□□□□ 0.45
HERPUD1-201ENST00000300302 LPAR1Q92633 364 aa17.88■□□□□ 0.45
HERPUD1-201ENST00000300302 HOOK1Q9UJC3 728 aaKnown RBP17.88■□□□□ 0.45
HERPUD1-201ENST00000300302 ZNF112Q9UJU3 913 aa17.88■□□□□ 0.45
HERPUD1-201ENST00000300302 FEM1BQ9UK73 627 aa17.88■□□□□ 0.45
HERPUD1-201ENST00000300302 VWA3AA6NCI4 1184 aa17.87■□□□□ 0.45
HERPUD1-201ENST00000300302 CAVIN2O95810 425 aa17.87■□□□□ 0.45
HERPUD1-201ENST00000300302 LETM2Q2VYF4 491 aa17.87■□□□□ 0.45
HERPUD1-201ENST00000300302 MCTP2Q6DN12 878 aa17.87■□□□□ 0.45
HERPUD1-201ENST00000300302 SCYL3Q8IZE3 742 aa17.87■□□□□ 0.45
HERPUD1-201ENST00000300302 GLIS2Q9BZE0 524 aaPredicted RBP17.87■□□□□ 0.45
HERPUD1-201ENST00000300302 KIAA1683Q9H0B3 1180 aa17.87■□□□□ 0.45
HERPUD1-201ENST00000300302 TMEM260Q9NX78 707 aa17.87■□□□□ 0.45
HERPUD1-201ENST00000300302 CCNT1O60563 726 aaKnown RBP17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 CLK2P49760 499 aaKnown RBP17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 ZRSR1Q15695 479 aaKnown RBP17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 ELOA2Q8IYF1 753 aaPredicted RBP17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 C4orf32Q8N8J7 132 aa17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 CCDC34Q96HJ3 373 aa17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 WRNIP1Q96S55 665 aa17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 PANK2Q9BZ23 570 aa17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 PICK1Q9NRD5 415 aa17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 DOCK1Q14185 1865 aa17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 INPP5BP32019 993 aa17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 LONP1P36776 959 aaKnown RBP17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 PRPHP41219 470 aa17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 UVSSAQ2YD98 709 aa17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 CCDC84Q86UT8 332 aaPredicted RBP17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 CNNM3Q8NE01 707 aa17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 DCPSQ96C86 337 aaKnown RBP17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 AS3MTQ9HBK9 375 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms