RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 DHX58Q96C10 678 aa29.23■■■□□ 2.27
SDCCAG3-201ENST00000298537 PNMA6FA0A0J9YX94 578 aa29.22■■■□□ 2.27
SDCCAG3-201ENST00000298537 SAMD7Q7Z3H4 446 aa29.22■■■□□ 2.27
SDCCAG3-201ENST00000298537 CCDC84Q86UT8 332 aaPredicted RBP29.22■■■□□ 2.27
SDCCAG3-201ENST00000298537 PGAP2Q9UHJ9 254 aa29.22■■■□□ 2.27
SDCCAG3-201ENST00000298537 TUBE1Q9UJT0 475 aa29.22■■■□□ 2.27
SDCCAG3-201ENST00000298537 PCDHA5Q9Y5H7 936 aa29.22■■■□□ 2.27
SDCCAG3-201ENST00000298537 GJA3Q9Y6H8 435 aa29.22■■■□□ 2.27
SDCCAG3-201ENST00000298537 MORC2Q9Y6X9 1032 aaPredicted RBP29.22■■■□□ 2.27
SDCCAG3-201ENST00000298537 CASP1P29466 404 aa29.22■■■□□ 2.27
SDCCAG3-201ENST00000298537 CCDC12Q8WUD4 166 aaPredicted RBP29.22■■■□□ 2.27
SDCCAG3-201ENST00000298537 HERC5Q9UII4 1024 aaKnown RBP29.22■■■□□ 2.27
SDCCAG3-201ENST00000298537 BMP15O95972 392 aa29.21■■■□□ 2.27
SDCCAG3-201ENST00000298537 UBE2SQ16763 222 aa29.21■■■□□ 2.27
SDCCAG3-201ENST00000298537 AOPEPQ8N6M6 819 aa29.21■■■□□ 2.27
SDCCAG3-201ENST00000298537 GNA11P29992 359 aa29.21■■■□□ 2.27
SDCCAG3-201ENST00000298537 LETM2Q2VYF4 491 aa29.21■■■□□ 2.27
SDCCAG3-201ENST00000298537 MTMR8Q96EF0 704 aa29.21■■■□□ 2.27
SDCCAG3-201ENST00000298537 GMPSP49915 693 aaPredicted RBP29.2■■■□□ 2.27
SDCCAG3-201ENST00000298537 REXO1Q8N1G1 1221 aaKnown RBP29.2■■■□□ 2.27
SDCCAG3-201ENST00000298537 TBCKQ8TEA7 893 aa29.2■■■□□ 2.27
SDCCAG3-201ENST00000298537 ZBTB5O15062 677 aa29.2■■■□□ 2.26
SDCCAG3-201ENST00000298537 EDIL3O43854 480 aa29.2■■■□□ 2.26
SDCCAG3-201ENST00000298537 QRICH1Q2TAL8 776 aa29.2■■■□□ 2.26
SDCCAG3-201ENST00000298537 PP2D1A8MPX8 630 aa29.19■■■□□ 2.26
SDCCAG3-201ENST00000298537 BMP6P22004 513 aa29.19■■■□□ 2.26
SDCCAG3-201ENST00000298537 NLRP12P59046 1061 aa29.19■■■□□ 2.26
SDCCAG3-201ENST00000298537 DCAF4Q8WV16 495 aa29.19■■■□□ 2.26
SDCCAG3-201ENST00000298537 NONOQ15233 471 aaKnown RBP eCLIP29.19■■■□□ 2.26
SDCCAG3-201ENST00000298537 TBC1D10BQ4KMP7 808 aaPredicted RBP29.19■■■□□ 2.26
SDCCAG3-201ENST00000298537 CEP57L1Q8IYX8 460 aa29.19■■■□□ 2.26
SDCCAG3-201ENST00000298537 ADCY7P51828 1080 aa29.18■■■□□ 2.26
SDCCAG3-201ENST00000298537 TNIP1Q15025 636 aa29.18■■■□□ 2.26
SDCCAG3-201ENST00000298537 POSTNQ15063 836 aa29.18■■■□□ 2.26
SDCCAG3-201ENST00000298537 MICALL2Q8IY33 904 aa29.18■■■□□ 2.26
SDCCAG3-201ENST00000298537 STAMQ92783 540 aa29.18■■■□□ 2.26
SDCCAG3-201ENST00000298537 GLIS2Q9BZE0 524 aaPredicted RBP29.18■■■□□ 2.26
SDCCAG3-201ENST00000298537 ZNF541Q9H0D2 1346 aa29.18■■■□□ 2.26
SDCCAG3-201ENST00000298537 ESYT2A0FGR8 921 aa29.17■■■□□ 2.26
SDCCAG3-201ENST00000298537 ESPNB1AK53 854 aa29.17■■■□□ 2.26
SDCCAG3-201ENST00000298537 MYO1BO43795 1136 aa29.17■■■□□ 2.26
SDCCAG3-201ENST00000298537 CCNT1O60563 726 aaKnown RBP29.17■■■□□ 2.26
SDCCAG3-201ENST00000298537 RASA3Q14644 834 aa29.17■■■□□ 2.26
SDCCAG3-201ENST00000298537 KRT25Q7Z3Z0 450 aa29.17■■■□□ 2.26
SDCCAG3-201ENST00000298537 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.17■■■□□ 2.26
SDCCAG3-201ENST00000298537 ZBTB21Q9ULJ3 1066 aa29.17■■■□□ 2.26
SDCCAG3-201ENST00000298537 AFMP43652 599 aa29.17■■■□□ 2.26
SDCCAG3-201ENST00000298537 PPP4R3BQ5MIZ7 849 aa29.17■■■□□ 2.26
SDCCAG3-201ENST00000298537 GMCL1P1Q8NEA9 526 aa29.17■■■□□ 2.26
SDCCAG3-201ENST00000298537 TMEM232C9JQI7 657 aa29.16■■■□□ 2.26
SDCCAG3-201ENST00000298537 ZRSR1Q15695 479 aaKnown RBP29.16■■■□□ 2.26
SDCCAG3-201ENST00000298537 CDC37Q16543 378 aaPredicted RBP29.16■■■□□ 2.26
SDCCAG3-201ENST00000298537 SPC24Q8NBT2 197 aa29.16■■■□□ 2.26
SDCCAG3-201ENST00000298537 ZNF280AP59817 542 aaPredicted RBP29.16■■■□□ 2.26
SDCCAG3-201ENST00000298537 ZYXQ15942 572 aaKnown RBP29.16■■■□□ 2.26
SDCCAG3-201ENST00000298537 FKBP1CQ5VVH2 108 aa29.16■■■□□ 2.26
SDCCAG3-201ENST00000298537 FAM83AQ86UY5 434 aa29.16■■■□□ 2.26
SDCCAG3-201ENST00000298537 ZNF830Q96NB3 372 aaPredicted RBP29.16■■■□□ 2.26
SDCCAG3-201ENST00000298537 FZD9O00144 591 aa29.15■■■□□ 2.26
SDCCAG3-201ENST00000298537 CAVIN2O95810 425 aa29.15■■■□□ 2.26
SDCCAG3-201ENST00000298537 BECN2A8MW95 431 aa29.14■■■□□ 2.26
SDCCAG3-201ENST00000298537 hCG_1984214I3L0E3 225 aa29.14■■■□□ 2.26
SDCCAG3-201ENST00000298537 PTMAP06454 111 aaKnown RBP29.14■■■□□ 2.26
SDCCAG3-201ENST00000298537 IKQ13123 557 aaPredicted RBP29.14■■■□□ 2.26
SDCCAG3-201ENST00000298537 NEK8Q86SG6 692 aa29.14■■■□□ 2.26
SDCCAG3-201ENST00000298537 FAM177A1Q8N128 213 aaPredicted RBP29.14■■■□□ 2.26
SDCCAG3-201ENST00000298537 ZNF713Q8N859 430 aaPredicted RBP29.14■■■□□ 2.26
SDCCAG3-201ENST00000298537 CNOT7Q9UIV1 285 aaKnown RBP29.14■■■□□ 2.26
SDCCAG3-201ENST00000298537 ARFGEF1Q9Y6D6 1849 aa29.14■■■□□ 2.25
SDCCAG3-201ENST00000298537 GOLGA6L19H0YKK7 550 aa29.14■■■□□ 2.25
SDCCAG3-201ENST00000298537 FAM43AQ8N2R8 423 aa29.14■■■□□ 2.25
SDCCAG3-201ENST00000298537 RIC8AQ9NPQ8 531 aa29.14■■■□□ 2.25
SDCCAG3-201ENST00000298537 MAN1B1Q9UKM7 699 aa29.14■■■□□ 2.25
SDCCAG3-201ENST00000298537 USP17L15C9J2P7 530 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 USP17L13C9JLJ4 530 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 USP17L11C9JVI0 530 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 USP17L18D6R9N7 530 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 USP17L22D6RA61 530 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 USP17L17D6RBQ6 530 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 USP17L19D6RCP7 530 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 USP17L20D6RJB6 530 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 USP17L24Q0WX57 530 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 E2F4Q16254 413 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 ARL6IP4Q66PJ3 421 aaKnown RBP29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 USP17L6PQ6QN14 398 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 GMCL1Q96IK5 515 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 TEPSINQ96N21 525 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 LTBP3Q9NS15 1303 aa29.13■■■□□ 2.25
SDCCAG3-201ENST00000298537 BMP3P12645 472 aa29.12■■■□□ 2.25
SDCCAG3-201ENST00000298537 TNNI2P48788 182 aa29.12■■■□□ 2.25
SDCCAG3-201ENST00000298537 POTEDQ86YR6 584 aa29.12■■■□□ 2.25
SDCCAG3-201ENST00000298537 PAGE5Q96GU1 130 aa29.12■■■□□ 2.25
SDCCAG3-201ENST00000298537 TRIM5Q9C035 493 aa29.12■■■□□ 2.25
SDCCAG3-201ENST00000298537 PCDHA1Q9Y5I3 950 aa29.12■■■□□ 2.25
SDCCAG3-201ENST00000298537 TDP2O95551 362 aa29.12■■■□□ 2.25
SDCCAG3-201ENST00000298537 KARSQ15046 597 aaKnown RBP29.12■■■□□ 2.25
SDCCAG3-201ENST00000298537 SLFN14P0C7P3 912 aa29.11■■■□□ 2.25
SDCCAG3-201ENST00000298537 CLK2P49760 499 aaKnown RBP29.11■■■□□ 2.25
SDCCAG3-201ENST00000298537 DTHD1Q6ZMT9 781 aa29.11■■■□□ 2.25
SDCCAG3-201ENST00000298537 PLIN2Q99541 437 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms