RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ECE1P42892 770 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 VEGFBP49765 207 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 ZNF157P51786 506 aaPredicted RBP6.97□□□□□ -1.29
SSX3-201ENST00000298396 TFAP4Q01664 338 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 PDE4BQ07343 736 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 PPIL2Q13356 520 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 RAB3GAP1Q15042 981 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 SEC23AQ15436 765 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 C4orf48Q5BLP8 95 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 RRP12Q5JTH9 1297 aaKnown RBP6.97□□□□□ -1.29
SSX3-201ENST00000298396 MFSD6Q6ZSS7 791 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 AMOTL1Q8IY63 956 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 TRMT44Q8IYL2 757 aaKnown RBP6.97□□□□□ -1.29
SSX3-201ENST00000298396 DNAJC5GQ8N7S2 189 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 BAP1Q92560 729 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 SLC10A4Q96EP9 437 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 CEP95Q96GE4 821 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 KIF2CQ99661 725 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 MKNK2Q9HBH9 465 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 ZSWIM5Q9P217 1185 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 CSADQ9Y600 493 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 RBBP6Q7Z6E9 1792 aaKnown RBP6.97□□□□□ -1.29
SSX3-201ENST00000298396 MCM3APO60318 1980 aa6.97□□□□□ -1.29
SSX3-201ENST00000298396 PLXNA1Q9UIW2 1896 aa6.96□□□□□ -1.29
SSX3-201ENST00000298396 A0A0G2JLL6 359 aaPredicted RBP6.96□□□□□ -1.3
SSX3-201ENST00000298396 USP17L5A8MUK1 530 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 MPHOSPH10O00566 681 aaKnown RBP6.96□□□□□ -1.3
SSX3-201ENST00000298396 ZBTB24O43167 697 aaPredicted RBP6.96□□□□□ -1.3
SSX3-201ENST00000298396 RANBP6O60518 1105 aaKnown RBP6.96□□□□□ -1.3
SSX3-201ENST00000298396 ASNSP08243 561 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 PCP11498 1178 aaKnown RBP6.96□□□□□ -1.3
SSX3-201ENST00000298396 EEF2P13639 858 aaKnown RBP6.96□□□□□ -1.3
SSX3-201ENST00000298396 ABL2P42684 1182 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 PPATQ06203 517 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 DEFB115Q30KQ5 88 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 TMEM179Q6ZVK1 233 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 CHST3Q7LGC8 479 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 PRRT2Q7Z6L0 340 aaPredicted RBP6.96□□□□□ -1.3
SSX3-201ENST00000298396 ERO1BQ86YB8 467 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 ENAHQ8N8S7 591 aaPredicted RBP6.96□□□□□ -1.3
SSX3-201ENST00000298396 BRI3BPQ8WY22 251 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 CAPNS2Q96L46 248 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 CCDC17Q96LX7 622 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 TCEANC2Q96MN5 208 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 PTPN18Q99952 460 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 ZKSCAN3Q9BRR0 538 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 WDR18Q9BV38 432 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 LRRC2Q9BYS8 371 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 PICK1Q9NRD5 415 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 GINM1Q9NU53 330 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 TCP11L1Q9NUJ3 509 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 MTMR4Q9NYA4 1195 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 ZHX2Q9Y6X8 837 aa6.96□□□□□ -1.3
SSX3-201ENST00000298396 WDR33Q9C0J8 1336 aaKnown RBP6.96□□□□□ -1.3
SSX3-201ENST00000298396 TRIM75PA6NK02 468 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 IGF2BP3O00425 579 aaKnown RBP eCLIP6.95□□□□□ -1.3
SSX3-201ENST00000298396 CD2BP2O95400 341 aaKnown RBP6.95□□□□□ -1.3
SSX3-201ENST00000298396 SLC3A2P08195 630 aaKnown RBP6.95□□□□□ -1.3
SSX3-201ENST00000298396 TSPY3P0CV98 308 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 TSPY8P0CW00 308 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 ZBTB48P10074 688 aaPredicted RBP6.95□□□□□ -1.3
SSX3-201ENST00000298396 HMGCS2P54868 508 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 EXOSC10Q01780 885 aaKnown RBP6.95□□□□□ -1.3
SSX3-201ENST00000298396 ICA1Q05084 483 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 PTK2Q05397 1052 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 SPP2Q13103 211 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 TREML2Q5T2D2 321 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 GPAT2Q6NUI2 795 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 ZNF598Q86UK7 904 aaKnown RBP6.95□□□□□ -1.3
SSX3-201ENST00000298396 BPHLQ86WA6 291 aaPredicted RBP6.95□□□□□ -1.3
SSX3-201ENST00000298396 ZNF444Q8N0Y2 327 aaPredicted RBP6.95□□□□□ -1.3
SSX3-201ENST00000298396 ZNF280CQ8ND82 737 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 IGDCC4Q8TDY8 1250 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 FOXJ1Q92949 421 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 TMEM47Q9BQJ4 181 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 PRKD2Q9BZL6 878 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 RNF41Q9H4P4 317 aaPredicted RBP6.95□□□□□ -1.3
SSX3-201ENST00000298396 LY9Q9HBG7 655 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 TOMM22Q9NS69 142 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 NYAP2Q9P242 653 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 TNKSO95271 1327 aa6.95□□□□□ -1.3
SSX3-201ENST00000298396 TSPY2A6NKD2 308 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 BTBD19C9JJ37 291 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 WNT7AO00755 349 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 SH2B2O14492 632 aaPredicted RBP6.94□□□□□ -1.3
SSX3-201ENST00000298396 SIAH2O43255 324 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 PRC1O43663 620 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 SOX11P35716 441 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 RBM25P49756 843 aaKnown RBP6.94□□□□□ -1.3
SSX3-201ENST00000298396 BACE1P56817 501 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 KIF23Q02241 960 aaPredicted RBP6.94□□□□□ -1.3
SSX3-201ENST00000298396 GRM1Q13255 1194 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 ZYXQ15942 572 aaKnown RBP6.94□□□□□ -1.3
SSX3-201ENST00000298396 SLC35G1Q2M3R5 365 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 LRRC47Q8N1G4 583 aaKnown RBP6.94□□□□□ -1.3
SSX3-201ENST00000298396 FAM43AQ8N2R8 423 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 NCOA7Q8NI08 942 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 ANKS1AQ92625 1134 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 ESR2Q92731 530 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms